BLASTX nr result
ID: Cimicifuga21_contig00019862
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00019862 (367 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote... 112 3e-23 emb|CBI24843.3| unnamed protein product [Vitis vinifera] 99 3e-19 ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com... 75 4e-12 ref|XP_004154752.1| PREDICTED: sister chromatid cohesion 1 prote... 75 7e-12 ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote... 75 7e-12 >ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis vinifera] Length = 761 Score = 112 bits (280), Expect = 3e-23 Identities = 62/121 (51%), Positives = 81/121 (66%) Frame = +2 Query: 2 LSPIMEDMPYSGGQSLSLQIHADPPSVGALPDSLVNFNNSSSPGFGLGNMSLELAILPTP 181 LSP M D+ YSG QSL Q ++PP+ P++ F++ S G++S LAI TP Sbjct: 318 LSPNMPDILYSGEQSLPFQQRSEPPASAVSPEAPEIFDSHIS----FGHVSPALAIGSTP 373 Query: 182 PVENKKAKSRKRKRDFVTSVVLSNQFIKDALNDPSGLVRKRKNLPCSALDVWKFNKRSRM 361 PVE KAKSRKRK+ F S+VL N+ +K AL D SGL+RK+K LPCSALD+WK N +SR Sbjct: 374 PVEKPKAKSRKRKQLFDVSLVLPNKLMKKALEDSSGLLRKKKRLPCSALDIWKINIKSRK 433 Query: 362 D 364 + Sbjct: 434 E 434 >emb|CBI24843.3| unnamed protein product [Vitis vinifera] Length = 709 Score = 99.4 bits (246), Expect = 3e-19 Identities = 62/121 (51%), Positives = 77/121 (63%) Frame = +2 Query: 2 LSPIMEDMPYSGGQSLSLQIHADPPSVGALPDSLVNFNNSSSPGFGLGNMSLELAILPTP 181 LSP M D+ YSG QSL Q A+ LP +N + S G++S LAI TP Sbjct: 301 LSPNMPDILYSGEQSLPFQQRAN----SILP--CLNLLSHVS-----GHVSPALAIGSTP 349 Query: 182 PVENKKAKSRKRKRDFVTSVVLSNQFIKDALNDPSGLVRKRKNLPCSALDVWKFNKRSRM 361 PVE KAKSRKRK+ F S+VL N+ +K AL D SGL+RK+K LPCSALD+WK N +SR Sbjct: 350 PVEKPKAKSRKRKQLFDVSLVLPNKLMKKALEDSSGLLRKKKRLPCSALDIWKINIKSRK 409 Query: 362 D 364 + Sbjct: 410 E 410 >ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis] gi|223547692|gb|EEF49185.1| cohesin subunit rad21, putative [Ricinus communis] Length = 774 Score = 75.5 bits (184), Expect = 4e-12 Identities = 45/120 (37%), Positives = 69/120 (57%) Frame = +2 Query: 5 SPIMEDMPYSGGQSLSLQIHADPPSVGALPDSLVNFNNSSSPGFGLGNMSLELAILPTPP 184 SP ED+ SGGQS Q ++ P+ A D+ F++ S G +S ELAI TP Sbjct: 319 SPFKEDVIPSGGQSSPFQQRSESPN-SASRDAPGIFDSHIS----FGRVSPELAIRSTPA 373 Query: 185 VENKKAKSRKRKRDFVTSVVLSNQFIKDALNDPSGLVRKRKNLPCSALDVWKFNKRSRMD 364 V+ + ++RKRK F + VL+N+F+K AL + ++RKR+ +P +AL +WK R + Sbjct: 374 VQQPRPRTRKRKHFFDEATVLTNKFMKKALENSKDILRKRREIPSTALGIWKLRNSLRKE 433 >ref|XP_004154752.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis sativus] Length = 664 Score = 74.7 bits (182), Expect = 7e-12 Identities = 44/116 (37%), Positives = 67/116 (57%) Frame = +2 Query: 11 IMEDMPYSGGQSLSLQIHADPPSVGALPDSLVNFNNSSSPGFGLGNMSLELAILPTPPVE 190 I+ED SL + A PP+ + P++L+ S+E + PTPP + Sbjct: 263 IIEDKMTPTKTSLPHEQSAGPPTSASPPEALIQ-------------PSVEHVLQPTPP-Q 308 Query: 191 NKKAKSRKRKRDFVTSVVLSNQFIKDALNDPSGLVRKRKNLPCSALDVWKFNKRSR 358 + +SRKRK+ F S VL+N+F+K AL D S L+R+R+N+P S+L+VWK N + R Sbjct: 309 QPRPRSRKRKQFFDKSTVLTNKFMKKALEDSSDLLRERRNIPSSSLEVWKLNNKLR 364 >ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis sativus] Length = 908 Score = 74.7 bits (182), Expect = 7e-12 Identities = 44/116 (37%), Positives = 67/116 (57%) Frame = +2 Query: 11 IMEDMPYSGGQSLSLQIHADPPSVGALPDSLVNFNNSSSPGFGLGNMSLELAILPTPPVE 190 I+ED SL + A PP+ + P++L+ S+E + PTPP + Sbjct: 498 IIEDKMTPTKTSLPHEQSAGPPTSASPPEALIQ-------------PSVEHVLQPTPP-Q 543 Query: 191 NKKAKSRKRKRDFVTSVVLSNQFIKDALNDPSGLVRKRKNLPCSALDVWKFNKRSR 358 + +SRKRK+ F S VL+N+F+K AL D S L+R+R+N+P S+L+VWK N + R Sbjct: 544 QPRPRSRKRKQFFDKSTVLTNKFMKKALEDSSDLLRERRNIPSSSLEVWKLNNKLR 599