BLASTX nr result

ID: Cimicifuga21_contig00019862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019862
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...   112   3e-23
emb|CBI24843.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com...    75   4e-12
ref|XP_004154752.1| PREDICTED: sister chromatid cohesion 1 prote...    75   7e-12
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote...    75   7e-12

>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/121 (51%), Positives = 81/121 (66%)
 Frame = +2

Query: 2   LSPIMEDMPYSGGQSLSLQIHADPPSVGALPDSLVNFNNSSSPGFGLGNMSLELAILPTP 181
           LSP M D+ YSG QSL  Q  ++PP+    P++   F++  S     G++S  LAI  TP
Sbjct: 318 LSPNMPDILYSGEQSLPFQQRSEPPASAVSPEAPEIFDSHIS----FGHVSPALAIGSTP 373

Query: 182 PVENKKAKSRKRKRDFVTSVVLSNQFIKDALNDPSGLVRKRKNLPCSALDVWKFNKRSRM 361
           PVE  KAKSRKRK+ F  S+VL N+ +K AL D SGL+RK+K LPCSALD+WK N +SR 
Sbjct: 374 PVEKPKAKSRKRKQLFDVSLVLPNKLMKKALEDSSGLLRKKKRLPCSALDIWKINIKSRK 433

Query: 362 D 364
           +
Sbjct: 434 E 434


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 62/121 (51%), Positives = 77/121 (63%)
 Frame = +2

Query: 2   LSPIMEDMPYSGGQSLSLQIHADPPSVGALPDSLVNFNNSSSPGFGLGNMSLELAILPTP 181
           LSP M D+ YSG QSL  Q  A+      LP   +N  +  S     G++S  LAI  TP
Sbjct: 301 LSPNMPDILYSGEQSLPFQQRAN----SILP--CLNLLSHVS-----GHVSPALAIGSTP 349

Query: 182 PVENKKAKSRKRKRDFVTSVVLSNQFIKDALNDPSGLVRKRKNLPCSALDVWKFNKRSRM 361
           PVE  KAKSRKRK+ F  S+VL N+ +K AL D SGL+RK+K LPCSALD+WK N +SR 
Sbjct: 350 PVEKPKAKSRKRKQLFDVSLVLPNKLMKKALEDSSGLLRKKKRLPCSALDIWKINIKSRK 409

Query: 362 D 364
           +
Sbjct: 410 E 410


>ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223547692|gb|EEF49185.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 774

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/120 (37%), Positives = 69/120 (57%)
 Frame = +2

Query: 5   SPIMEDMPYSGGQSLSLQIHADPPSVGALPDSLVNFNNSSSPGFGLGNMSLELAILPTPP 184
           SP  ED+  SGGQS   Q  ++ P+  A  D+   F++  S     G +S ELAI  TP 
Sbjct: 319 SPFKEDVIPSGGQSSPFQQRSESPN-SASRDAPGIFDSHIS----FGRVSPELAIRSTPA 373

Query: 185 VENKKAKSRKRKRDFVTSVVLSNQFIKDALNDPSGLVRKRKNLPCSALDVWKFNKRSRMD 364
           V+  + ++RKRK  F  + VL+N+F+K AL +   ++RKR+ +P +AL +WK     R +
Sbjct: 374 VQQPRPRTRKRKHFFDEATVLTNKFMKKALENSKDILRKRREIPSTALGIWKLRNSLRKE 433


>ref|XP_004154752.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
           sativus]
          Length = 664

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 44/116 (37%), Positives = 67/116 (57%)
 Frame = +2

Query: 11  IMEDMPYSGGQSLSLQIHADPPSVGALPDSLVNFNNSSSPGFGLGNMSLELAILPTPPVE 190
           I+ED       SL  +  A PP+  + P++L+               S+E  + PTPP +
Sbjct: 263 IIEDKMTPTKTSLPHEQSAGPPTSASPPEALIQ-------------PSVEHVLQPTPP-Q 308

Query: 191 NKKAKSRKRKRDFVTSVVLSNQFIKDALNDPSGLVRKRKNLPCSALDVWKFNKRSR 358
             + +SRKRK+ F  S VL+N+F+K AL D S L+R+R+N+P S+L+VWK N + R
Sbjct: 309 QPRPRSRKRKQFFDKSTVLTNKFMKKALEDSSDLLRERRNIPSSSLEVWKLNNKLR 364


>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
           sativus]
          Length = 908

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 44/116 (37%), Positives = 67/116 (57%)
 Frame = +2

Query: 11  IMEDMPYSGGQSLSLQIHADPPSVGALPDSLVNFNNSSSPGFGLGNMSLELAILPTPPVE 190
           I+ED       SL  +  A PP+  + P++L+               S+E  + PTPP +
Sbjct: 498 IIEDKMTPTKTSLPHEQSAGPPTSASPPEALIQ-------------PSVEHVLQPTPP-Q 543

Query: 191 NKKAKSRKRKRDFVTSVVLSNQFIKDALNDPSGLVRKRKNLPCSALDVWKFNKRSR 358
             + +SRKRK+ F  S VL+N+F+K AL D S L+R+R+N+P S+L+VWK N + R
Sbjct: 544 QPRPRSRKRKQFFDKSTVLTNKFMKKALEDSSDLLRERRNIPSSSLEVWKLNNKLR 599


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