BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019855
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
emb|CBI28142.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002529360.1| pentatricopeptide repeat-containing protein,...    82   6e-14

>ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Glycine max]
          Length = 591

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/76 (55%), Positives = 53/76 (69%)
 Frame = +2

Query: 5   DGRKIHCFVVTTGLEFDPYTRNSLMDMYANIGCTASLRQLFVETLNKDTFCWNILISGYT 184
           +G KIH FVV TGLEFDPY  NSLMDMYA +G      Q+F E   +D   WNI+ISGY 
Sbjct: 126 EGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYV 185

Query: 185 RCGKFGDAVNAFRQME 232
           RC +F +AV+ +R+M+
Sbjct: 186 RCKRFEEAVDVYRRMQ 201


>ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Glycine max]
          Length = 614

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/75 (53%), Positives = 52/75 (69%)
 Frame = +2

Query: 5   DGRKIHCFVVTTGLEFDPYTRNSLMDMYANIGCTASLRQLFVETLNKDTFCWNILISGYT 184
           +G K+H FVV TGLEFDPY  NS MDMYA +G      Q+F E  ++D   WNI+ISGY 
Sbjct: 126 EGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYV 185

Query: 185 RCGKFGDAVNAFRQM 229
           RC +F +AV+ +R+M
Sbjct: 186 RCKRFEEAVDVYRRM 200


>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/76 (52%), Positives = 55/76 (72%)
 Frame = +2

Query: 5   DGRKIHCFVVTTGLEFDPYTRNSLMDMYANIGCTASLRQLFVETLNKDTFCWNILISGYT 184
           +G K++ FVV +GLEFD Y  NSLMDMYA +G   +LRQ+F E   +D   WN+LISGY 
Sbjct: 150 EGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYV 209

Query: 185 RCGKFGDAVNAFRQME 232
           +C ++ DAV+ FR+M+
Sbjct: 210 KCRRYEDAVDVFRRMQ 225


>emb|CBI28142.3| unnamed protein product [Vitis vinifera]
          Length = 571

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/75 (53%), Positives = 54/75 (72%)
 Frame = +2

Query: 5   DGRKIHCFVVTTGLEFDPYTRNSLMDMYANIGCTASLRQLFVETLNKDTFCWNILISGYT 184
           +G K++ FVV +GLEFD Y  NSLMDMYA +G   +LRQ+F E   +D   WN+LISGY 
Sbjct: 150 EGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYV 209

Query: 185 RCGKFGDAVNAFRQM 229
           +C ++ DAV+ FRQ+
Sbjct: 210 KCRRYEDAVDVFRQI 224


>ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531180|gb|EEF33027.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 683

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/77 (46%), Positives = 50/77 (64%)
 Frame = +2

Query: 2   SDGRKIHCFVVTTGLEFDPYTRNSLMDMYANIGCTASLRQLFVETLNKDTFCWNILISGY 181
           S   K+   V  TGLEFD Y RNSL+DMYA +  T  ++ LF E  ++D   WN++ISGY
Sbjct: 154 SKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGY 213

Query: 182 TRCGKFGDAVNAFRQME 232
            +C +F DA+N F +M+
Sbjct: 214 VKCRRFEDAINVFCRMQ 230



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/71 (38%), Positives = 41/71 (57%)
 Frame = +2

Query: 8   GRKIHCFVVTTGLEFDPYTRNSLMDMYANIGCTASLRQLFVETLNKDTFCWNILISGYTR 187
           G+KIH +V    ++F P   N+L+DMY   GC +  R +F E  +K+  CW  ++SGY  
Sbjct: 258 GKKIHHYV-RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYAN 316

Query: 188 CGKFGDAVNAF 220
           CG+  +A   F
Sbjct: 317 CGELEEARELF 327