BLASTX nr result

ID: Cimicifuga21_contig00019849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019849
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycin...   151   5e-35
ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycin...   151   5e-35
ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|1...   151   5e-35
ref|XP_002511442.1| structural constituent of ribosome, putative...   150   1e-34
ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitoch...   150   1e-34

>ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycine max]
           gi|255640572|gb|ACU20571.1| unknown [Glycine max]
          Length = 143

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/108 (69%), Positives = 82/108 (75%), Gaps = 2/108 (1%)
 Frame = +3

Query: 12  MFMVRVFRRTLFXXXXXXXXXXXXXXST--KTVHNPLEAFFEADRSQEEEKPVVYGRGWK 185
           MF+ R   RTLF              +   +  HNPL+ FFEADRS +++KPVVYGR WK
Sbjct: 1   MFLSRTLGRTLFAAAARSKQYATTAAAAAGREGHNPLQEFFEADRSPDDDKPVVYGRSWK 60

Query: 186 ASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 329
           ASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK
Sbjct: 61  ASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 108


>ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycine max]
           gi|255629706|gb|ACU15202.1| unknown [Glycine max]
          Length = 142

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/107 (70%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
 Frame = +3

Query: 12  MFMVRVFRRTLFXXXXXXXXXXXXXXS-TKTVHNPLEAFFEADRSQEEEKPVVYGRGWKA 188
           MF+ R   RTLF              + ++  HNPL+ FFEADRS E++KPVVYGR WKA
Sbjct: 1   MFLSRTLGRTLFAAAARSKQYATTAAAASREGHNPLQEFFEADRSPEDDKPVVYGRSWKA 60

Query: 189 SELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 329
            ELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK
Sbjct: 61  CELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 107


>ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|118483659|gb|ABK93723.1|
           unknown [Populus trichocarpa]
           gi|222861024|gb|EEE98566.1| predicted protein [Populus
           trichocarpa]
          Length = 142

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/107 (70%), Positives = 81/107 (75%), Gaps = 1/107 (0%)
 Frame = +3

Query: 12  MFMVRVFRRTLFXXXXXXXXXXXXXXSTKTV-HNPLEAFFEADRSQEEEKPVVYGRGWKA 188
           MFM R   RTL               +T T  HNPLE FFEADRSQ+E+KP+VYGR WKA
Sbjct: 1   MFMTRFIGRTLLAAAKSETHAASAAAATATSGHNPLEEFFEADRSQDEDKPIVYGRSWKA 60

Query: 189 SELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 329
           SELRLKSWDDL KLWYVLLKEKNMLMTQRQML+AQN RFPNPER+PK
Sbjct: 61  SELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLHAQNFRFPNPERLPK 107


>ref|XP_002511442.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223550557|gb|EEF52044.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 163

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/108 (70%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
 Frame = +3

Query: 12  MFMVRVFRRTLFXXXXXXXXXXXXXXS--TKTVHNPLEAFFEADRSQEEEKPVVYGRGWK 185
           MF+ R   RTLF              +  T+T  NPLE FFEADRSQ+E KPVVYGR WK
Sbjct: 1   MFLTRFIGRTLFAAAKSETPAAAAAATATTRTPLNPLEEFFEADRSQDEAKPVVYGRSWK 60

Query: 186 ASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 329
           ASELRLKSWDDL+KLWYVLLKEKNMLMTQRQML+AQNLRFPNPER+PK
Sbjct: 61  ASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLHAQNLRFPNPERLPK 108


>ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 1
           [Vitis vinifera] gi|225457112|ref|XP_002283459.1|
           PREDICTED: 39S ribosomal protein L47, mitochondrial
           isoform 2 [Vitis vinifera] gi|297733826|emb|CBI15073.3|
           unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/106 (69%), Positives = 82/106 (77%)
 Frame = +3

Query: 12  MFMVRVFRRTLFXXXXXXXXXXXXXXSTKTVHNPLEAFFEADRSQEEEKPVVYGRGWKAS 191
           MF+ RVF R L               + +  +NPLE FFEADRS +E+KPVVYGRGWKAS
Sbjct: 1   MFVRRVFGRALLAAAKSEPSAAGAA-TARAGYNPLEEFFEADRSPDEDKPVVYGRGWKAS 59

Query: 192 ELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 329
           ELRLKSWDDLHKLWY+LLKEKNMLMTQRQML +QNLRFPNPERIPK
Sbjct: 60  ELRLKSWDDLHKLWYILLKEKNMLMTQRQMLQSQNLRFPNPERIPK 105


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