BLASTX nr result
ID: Cimicifuga21_contig00019849
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00019849 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycin... 151 5e-35 ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycin... 151 5e-35 ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|1... 151 5e-35 ref|XP_002511442.1| structural constituent of ribosome, putative... 150 1e-34 ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitoch... 150 1e-34 >ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycine max] gi|255640572|gb|ACU20571.1| unknown [Glycine max] Length = 143 Score = 151 bits (382), Expect = 5e-35 Identities = 75/108 (69%), Positives = 82/108 (75%), Gaps = 2/108 (1%) Frame = +3 Query: 12 MFMVRVFRRTLFXXXXXXXXXXXXXXST--KTVHNPLEAFFEADRSQEEEKPVVYGRGWK 185 MF+ R RTLF + + HNPL+ FFEADRS +++KPVVYGR WK Sbjct: 1 MFLSRTLGRTLFAAAARSKQYATTAAAAAGREGHNPLQEFFEADRSPDDDKPVVYGRSWK 60 Query: 186 ASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 329 ASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK Sbjct: 61 ASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 108 >ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycine max] gi|255629706|gb|ACU15202.1| unknown [Glycine max] Length = 142 Score = 151 bits (382), Expect = 5e-35 Identities = 75/107 (70%), Positives = 82/107 (76%), Gaps = 1/107 (0%) Frame = +3 Query: 12 MFMVRVFRRTLFXXXXXXXXXXXXXXS-TKTVHNPLEAFFEADRSQEEEKPVVYGRGWKA 188 MF+ R RTLF + ++ HNPL+ FFEADRS E++KPVVYGR WKA Sbjct: 1 MFLSRTLGRTLFAAAARSKQYATTAAAASREGHNPLQEFFEADRSPEDDKPVVYGRSWKA 60 Query: 189 SELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 329 ELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK Sbjct: 61 CELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 107 >ref|XP_002320251.1| predicted protein [Populus trichocarpa] gi|118483659|gb|ABK93723.1| unknown [Populus trichocarpa] gi|222861024|gb|EEE98566.1| predicted protein [Populus trichocarpa] Length = 142 Score = 151 bits (382), Expect = 5e-35 Identities = 75/107 (70%), Positives = 81/107 (75%), Gaps = 1/107 (0%) Frame = +3 Query: 12 MFMVRVFRRTLFXXXXXXXXXXXXXXSTKTV-HNPLEAFFEADRSQEEEKPVVYGRGWKA 188 MFM R RTL +T T HNPLE FFEADRSQ+E+KP+VYGR WKA Sbjct: 1 MFMTRFIGRTLLAAAKSETHAASAAAATATSGHNPLEEFFEADRSQDEDKPIVYGRSWKA 60 Query: 189 SELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 329 SELRLKSWDDL KLWYVLLKEKNMLMTQRQML+AQN RFPNPER+PK Sbjct: 61 SELRLKSWDDLQKLWYVLLKEKNMLMTQRQMLHAQNFRFPNPERLPK 107 >ref|XP_002511442.1| structural constituent of ribosome, putative [Ricinus communis] gi|223550557|gb|EEF52044.1| structural constituent of ribosome, putative [Ricinus communis] Length = 163 Score = 150 bits (379), Expect = 1e-34 Identities = 76/108 (70%), Positives = 83/108 (76%), Gaps = 2/108 (1%) Frame = +3 Query: 12 MFMVRVFRRTLFXXXXXXXXXXXXXXS--TKTVHNPLEAFFEADRSQEEEKPVVYGRGWK 185 MF+ R RTLF + T+T NPLE FFEADRSQ+E KPVVYGR WK Sbjct: 1 MFLTRFIGRTLFAAAKSETPAAAAAATATTRTPLNPLEEFFEADRSQDEAKPVVYGRSWK 60 Query: 186 ASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 329 ASELRLKSWDDL+KLWYVLLKEKNMLMTQRQML+AQNLRFPNPER+PK Sbjct: 61 ASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLHAQNLRFPNPERLPK 108 >ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 1 [Vitis vinifera] gi|225457112|ref|XP_002283459.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 2 [Vitis vinifera] gi|297733826|emb|CBI15073.3| unnamed protein product [Vitis vinifera] Length = 140 Score = 150 bits (378), Expect = 1e-34 Identities = 74/106 (69%), Positives = 82/106 (77%) Frame = +3 Query: 12 MFMVRVFRRTLFXXXXXXXXXXXXXXSTKTVHNPLEAFFEADRSQEEEKPVVYGRGWKAS 191 MF+ RVF R L + + +NPLE FFEADRS +E+KPVVYGRGWKAS Sbjct: 1 MFVRRVFGRALLAAAKSEPSAAGAA-TARAGYNPLEEFFEADRSPDEDKPVVYGRGWKAS 59 Query: 192 ELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK 329 ELRLKSWDDLHKLWY+LLKEKNMLMTQRQML +QNLRFPNPERIPK Sbjct: 60 ELRLKSWDDLHKLWYILLKEKNMLMTQRQMLQSQNLRFPNPERIPK 105