BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019799
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-...   210   1e-52
ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-...   196   1e-48
ref|XP_002444485.1| hypothetical protein SORBIDRAFT_07g022680 [S...   196   2e-48
ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays] ...   195   3e-48
gb|ACN33812.1| unknown [Zea mays]                                     194   8e-48

>ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Vitis vinifera]
          Length = 527

 Score =  210 bits (534), Expect = 1e-52
 Identities = 102/144 (70%), Positives = 118/144 (81%)
 Frame = +3

Query: 3   GMRWIMGVISQLEDGHFYLEDLTASVEVNLSNARITSGLFVENTIIVAEGELLPSGIFQV 182
           G RW+MGVISQLEDGHF+LEDLTASVE+NLSNA+IT+G F ENTIIVAEGE+   GIFQV
Sbjct: 177 GKRWVMGVISQLEDGHFFLEDLTASVEINLSNAKITTGFFSENTIIVAEGEMFLDGIFQV 236

Query: 183 STCGFPPLEDRDESXXXXXXXXXXXXXYLPAEEMLRLQGLEKNAVNEMFIVLSDIWLDHD 362
           STCGFPPLEDRDES              L  EE LRL GLEK AVN+MF++LSD+WLD++
Sbjct: 237 STCGFPPLEDRDESLASLSGLDFFGGGTLTREETLRLAGLEKKAVNDMFVILSDVWLDNE 296

Query: 363 ETMAKVATVLDGYEDLEVVPSLFV 434
           ETM K+ATVLDGYE++EVVPSLF+
Sbjct: 297 ETMGKLATVLDGYENVEVVPSLFI 320


>ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Cucumis sativus]
          Length = 536

 Score =  196 bits (499), Expect = 1e-48
 Identities = 95/144 (65%), Positives = 114/144 (79%)
 Frame = +3

Query: 3   GMRWIMGVISQLEDGHFYLEDLTASVEVNLSNARITSGLFVENTIIVAEGELLPSGIFQV 182
           G +W+MGVISQ+EDGHFYLEDLTASVE+NLS+A+IT+GLF ENTIIVAEGE+L  GIFQV
Sbjct: 186 GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQV 245

Query: 183 STCGFPPLEDRDESXXXXXXXXXXXXXYLPAEEMLRLQGLEKNAVNEMFIVLSDIWLDHD 362
            TCGFPPLE+R +S              LP EE LR   LEK AVN+MF++LSDIWLD +
Sbjct: 246 VTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSE 305

Query: 363 ETMAKVATVLDGYEDLEVVPSLFV 434
           E M K+ T+LDG+E++EVVPSLFV
Sbjct: 306 EAMGKLETILDGFENVEVVPSLFV 329


>ref|XP_002444485.1| hypothetical protein SORBIDRAFT_07g022680 [Sorghum bicolor]
           gi|241940835|gb|EES13980.1| hypothetical protein
           SORBIDRAFT_07g022680 [Sorghum bicolor]
          Length = 431

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/144 (65%), Positives = 114/144 (79%)
 Frame = +3

Query: 3   GMRWIMGVISQLEDGHFYLEDLTASVEVNLSNARITSGLFVENTIIVAEGELLPSGIFQV 182
           G RWIMGVISQLE+  FYLEDLT +V ++LSNA+ITSG FVENT+IVAEGELL +GIFQV
Sbjct: 181 GRRWIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQV 240

Query: 183 STCGFPPLEDRDESXXXXXXXXXXXXXYLPAEEMLRLQGLEKNAVNEMFIVLSDIWLDHD 362
           +TCGFPPLEDR+ S              +P+EE LRL  LEK AVN+MF++LSD+WLD+ 
Sbjct: 241 NTCGFPPLEDREASVSLLMGLDFFGGGVIPSEEALRLSSLEKKAVNDMFVILSDVWLDNP 300

Query: 363 ETMAKVATVLDGYEDLEVVPSLFV 434
           ETM K+A VLDGY+ +EVVPSLFV
Sbjct: 301 ETMEKLAVVLDGYDSVEVVPSLFV 324


>ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays]
           gi|195607112|gb|ACG25386.1| DNA polymerase epsilon
           subunit 2 [Zea mays] gi|414869832|tpg|DAA48389.1| TPA:
           DNA polymerase epsilon subunit 2 [Zea mays]
          Length = 533

 Score =  195 bits (496), Expect = 3e-48
 Identities = 95/144 (65%), Positives = 113/144 (78%)
 Frame = +3

Query: 3   GMRWIMGVISQLEDGHFYLEDLTASVEVNLSNARITSGLFVENTIIVAEGELLPSGIFQV 182
           G RWIMGVISQLE+  FYLEDLT +V ++LSNA+ITSG FVENT+IVAEGELL +GIFQV
Sbjct: 181 GRRWIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQV 240

Query: 183 STCGFPPLEDRDESXXXXXXXXXXXXXYLPAEEMLRLQGLEKNAVNEMFIVLSDIWLDHD 362
           +TCGFPPLEDR+ S              +P EE LRL  LEK AVN+MF++LSD+WLD+ 
Sbjct: 241 NTCGFPPLEDREASVSLLMGFDFFGGGVIPTEETLRLSSLEKKAVNDMFVILSDVWLDNP 300

Query: 363 ETMAKVATVLDGYEDLEVVPSLFV 434
           ETM K+A VLDGY+ +EVVPSLFV
Sbjct: 301 ETMEKLAVVLDGYDSVEVVPSLFV 324


>gb|ACN33812.1| unknown [Zea mays]
          Length = 533

 Score =  194 bits (492), Expect = 8e-48
 Identities = 94/144 (65%), Positives = 113/144 (78%)
 Frame = +3

Query: 3   GMRWIMGVISQLEDGHFYLEDLTASVEVNLSNARITSGLFVENTIIVAEGELLPSGIFQV 182
           G RWIMGVISQLE+  FYLEDLT +V ++LSNA+ITSG FVENT+IVAEGELL +GIFQV
Sbjct: 181 GRRWIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQV 240

Query: 183 STCGFPPLEDRDESXXXXXXXXXXXXXYLPAEEMLRLQGLEKNAVNEMFIVLSDIWLDHD 362
           +TCGFPPLEDR+ S              +P EE LRL  L+K AVN+MF++LSD+WLD+ 
Sbjct: 241 NTCGFPPLEDREASVSLLMGFDFFGGGVIPTEETLRLSSLKKKAVNDMFVILSDVWLDNP 300

Query: 363 ETMAKVATVLDGYEDLEVVPSLFV 434
           ETM K+A VLDGY+ +EVVPSLFV
Sbjct: 301 ETMEKLAVVLDGYDSVEVVPSLFV 324