BLASTX nr result

ID: Cimicifuga21_contig00019736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019736
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852...   156   1e-36
ref|XP_002306782.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
ref|XP_002524755.1| lipid binding protein, putative [Ricinus com...   152   2e-35
ref|XP_002517105.1| lipid binding protein, putative [Ricinus com...   150   1e-34
ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257...   149   3e-34

>ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852532 [Vitis vinifera]
          Length = 214

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/114 (65%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
 Frame = -3

Query: 341 MEGPTKFGRLIALSMTVQVISIMPINGQITSPCTASMITSFTPCMNFITGS-SANGTSPT 165
           MEG   F  ++A+  T+  IS++  N QI++PCT SMI+SFTPC+NFITGS S NG+SPT
Sbjct: 1   MEGLKAFQHMVAVYTTLLAISVISANAQISTPCTTSMISSFTPCLNFITGSTSGNGSSPT 60

Query: 164 TQCCGSLRSLLSQGMDCACLLITASVPVQLPINRTLAISLPRACNIAGVPVQCK 3
             CC SLRSL S  MDCACL+IT SVP+QLPINRTLAISLPRACN+  VP+QCK
Sbjct: 61  AGCCSSLRSLTSTTMDCACLIITGSVPLQLPINRTLAISLPRACNMGSVPIQCK 114


>ref|XP_002306782.1| predicted protein [Populus trichocarpa] gi|222856231|gb|EEE93778.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/113 (67%), Positives = 93/113 (82%)
 Frame = -3

Query: 341 MEGPTKFGRLIALSMTVQVISIMPINGQITSPCTASMITSFTPCMNFITGSSANGTSPTT 162
           MEG   F  LIA+  T+ VIS+   NGQI++PCT SMI+SFTPC+NFITGS+ NG+SPT 
Sbjct: 1   MEGLRVFN-LIAILSTLLVISV---NGQISTPCTTSMISSFTPCINFITGSTNNGSSPTG 56

Query: 161 QCCGSLRSLLSQGMDCACLLITASVPVQLPINRTLAISLPRACNIAGVPVQCK 3
            CC S +SL+S GMDCACLLITA+VP+QLPINRTLAI+LPRAC ++GVP+ CK
Sbjct: 57  SCCSSFKSLMSTGMDCACLLITANVPLQLPINRTLAITLPRACKMSGVPMLCK 109


>ref|XP_002524755.1| lipid binding protein, putative [Ricinus communis]
           gi|223535939|gb|EEF37598.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 219

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/109 (68%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
 Frame = -3

Query: 326 KFGRLIALSMTVQVISIMPINGQITSPCTASMITSF-TPCMNFITGSSANGTSPTTQCCG 150
           K  ++IA+  T+  IS+   NGQI++PCT SMITSF TPC+NFITGSS NG SPTT CC 
Sbjct: 5   KILQVIAMISTIIAISV---NGQISTPCTTSMITSFFTPCINFITGSSNNGNSPTTSCCN 61

Query: 149 SLRSLLSQGMDCACLLITASVPVQLPINRTLAISLPRACNIAGVPVQCK 3
           SL+SL+S  MDCACL++TA+VPVQLPINRTLAISLPRAC + GVP+QCK
Sbjct: 62  SLKSLMSTSMDCACLIVTANVPVQLPINRTLAISLPRACKMNGVPLQCK 110


>ref|XP_002517105.1| lipid binding protein, putative [Ricinus communis]
           gi|223543740|gb|EEF45268.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 206

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/107 (61%), Positives = 83/107 (77%)
 Frame = -3

Query: 323 FGRLIALSMTVQVISIMPINGQITSPCTASMITSFTPCMNFITGSSANGTSPTTQCCGSL 144
           F R+I       +  I P +GQI +PCT S+++ FTPCM+F+T S+ANGTSPT+ CC SL
Sbjct: 7   FSRMIPALAVALIFLIFPAHGQINTPCTPSLLSVFTPCMSFLTNSTANGTSPTSDCCSSL 66

Query: 143 RSLLSQGMDCACLLITASVPVQLPINRTLAISLPRACNIAGVPVQCK 3
           ++L   GMDC CL++T SVP Q+PINRTLAISLPRACN+AGVPVQCK
Sbjct: 67  KNLTGNGMDCLCLIVTGSVPFQIPINRTLAISLPRACNMAGVPVQCK 113


>ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257872 [Vitis vinifera]
          Length = 217

 Score =  149 bits (375), Expect = 3e-34
 Identities = 67/104 (64%), Positives = 82/104 (78%)
 Frame = -3

Query: 314 LIALSMTVQVISIMPINGQITSPCTASMITSFTPCMNFITGSSANGTSPTTQCCGSLRSL 135
           L++      ++ IMP+ GQI++ C+ASMI+SFTPC+NF+T SS NGTSPT  CC +LRSL
Sbjct: 10  LVSTLAIALMVVIMPVQGQISTSCSASMISSFTPCINFVTNSSGNGTSPTADCCNALRSL 69

Query: 134 LSQGMDCACLLITASVPVQLPINRTLAISLPRACNIAGVPVQCK 3
            S  MDC CL++T SVP Q+PINRTLAISLPRACN A VPVQCK
Sbjct: 70  TSTSMDCLCLIVTGSVPFQMPINRTLAISLPRACNTASVPVQCK 113


Top