BLASTX nr result

ID: Cimicifuga21_contig00019706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019706
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134221.1| PREDICTED: dynein light chain 1, cytoplasmic...   149   4e-34
ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|1...   147   2e-33
gb|ABU98947.1| dynein light chain [Lupinus albus]                     147   2e-33
ref|XP_004150499.1| PREDICTED: dynein light chain 1, cytoplasmic...   147   3e-33
gb|AFY26900.1| dynein light chain [Morella rubra]                     147   3e-33

>ref|XP_004134221.1| PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis sativus]
           gi|449515341|ref|XP_004164708.1| PREDICTED: dynein light
           chain 1, cytoplasmic-like [Cucumis sativus]
          Length = 120

 Score =  149 bits (377), Expect = 4e-34
 Identities = 69/78 (88%), Positives = 74/78 (94%)
 Frame = -2

Query: 506 DMNEDMQKEAIDCALSAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFGSYVTHETH 327
           DM  DMQKEAID A++AFEKHSVEK+IAEQIKK+FDK HGPTWHCIVGRNFGSYVTHET+
Sbjct: 43  DMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETN 102

Query: 326 HFVYFYLDQKAILLFKSG 273
           HFVYFYLDQKAILLFKSG
Sbjct: 103 HFVYFYLDQKAILLFKSG 120


>ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|118482080|gb|ABK92971.1|
           unknown [Populus trichocarpa]
           gi|222838609|gb|EEE76974.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  147 bits (372), Expect = 2e-33
 Identities = 73/118 (61%), Positives = 87/118 (73%), Gaps = 5/118 (4%)
 Frame = -2

Query: 611 AEQTKRSIGGGA-----SLTKSFSDDXXXXXXXXXXXXXADMNEDMQKEAIDCALSAFEK 447
           +E  KRSI GG      S  +  S               ADM +DMQKEA+D A++AFE+
Sbjct: 3   SEDMKRSITGGVKVENDSYYRKSSPAAAAPPGKKIIIKNADMKDDMQKEAVDIAIAAFER 62

Query: 446 HSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFGSYVTHETHHFVYFYLDQKAILLFKSG 273
           ++VEK++AE IKK+FDKKHGPTWHCIVGRNFGSYVTHET+HFVYFYLDQKA+LLFKSG
Sbjct: 63  NNVEKDVAEHIKKEFDKKHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 120


>gb|ABU98947.1| dynein light chain [Lupinus albus]
          Length = 121

 Score =  147 bits (371), Expect = 2e-33
 Identities = 74/121 (61%), Positives = 89/121 (73%), Gaps = 7/121 (5%)
 Frame = -2

Query: 614 MAEQTKRSIGGGASL-TKSFSDDXXXXXXXXXXXXXA------DMNEDMQKEAIDCALSA 456
           M+E TK+  GGG  L +K  S+D                    DM  +MQKEA+D A+S+
Sbjct: 1   MSEGTKKMSGGGVGLISKPNSEDRNLSALPSAVATKKVIIKNADMLPEMQKEAVDIAVSS 60

Query: 455 FEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFGSYVTHETHHFVYFYLDQKAILLFKS 276
           FEK++VEKE+AE IKK+FDK+HGPTWHCIVGRNFGSYVTHET+HFVYFYLDQKA+LLFKS
Sbjct: 61  FEKYNVEKEVAEHIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKS 120

Query: 275 G 273
           G
Sbjct: 121 G 121


>ref|XP_004150499.1| PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis sativus]
           gi|449528079|ref|XP_004171034.1| PREDICTED: dynein light
           chain 1, cytoplasmic-like [Cucumis sativus]
          Length = 117

 Score =  147 bits (370), Expect = 3e-33
 Identities = 76/118 (64%), Positives = 87/118 (73%), Gaps = 4/118 (3%)
 Frame = -2

Query: 614 MAEQTKRSIGGGASLTKSFSDDXXXXXXXXXXXXXA----DMNEDMQKEAIDCALSAFEK 447
           M+   KRSI G   L KS S+D                  DM  D+QK+AID A++AFEK
Sbjct: 1   MSNDAKRSIQG-TLLVKSVSEDRKPPAVTTTGKKIVIKSADMFGDVQKKAIDVAIAAFEK 59

Query: 446 HSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFGSYVTHETHHFVYFYLDQKAILLFKSG 273
           HSVEK+IAE IKK+FDK+HGPTWHCIVGRNFGSYVTHET+HFVYFYLDQKA+LLFKSG
Sbjct: 60  HSVEKDIAECIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117


>gb|AFY26900.1| dynein light chain [Morella rubra]
          Length = 125

 Score =  147 bits (370), Expect = 3e-33
 Identities = 74/125 (59%), Positives = 86/125 (68%), Gaps = 11/125 (8%)
 Frame = -2

Query: 614 MAEQTKRSIGGGASLTKSFSDDXXXXXXXXXXXXXA-----------DMNEDMQKEAIDC 468
           M+E  KR+I GG  +    SDD                         DM  DMQKEAID 
Sbjct: 1   MSEDAKRAIQGGLMVKPPSSDDRKPSAAAGPRPATPPSGKRVIIKSADMLPDMQKEAIDT 60

Query: 467 ALSAFEKHSVEKEIAEQIKKDFDKKHGPTWHCIVGRNFGSYVTHETHHFVYFYLDQKAIL 288
           A++AFEKHSVEK++AE IKK+FD++HG TWHCIVGRNFGSYVTHET+HFVYFYLDQKA+L
Sbjct: 61  AIAAFEKHSVEKDVAEHIKKEFDQRHGSTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVL 120

Query: 287 LFKSG 273
           LFKSG
Sbjct: 121 LFKSG 125


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