BLASTX nr result

ID: Cimicifuga21_contig00019691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019691
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310778.1| predicted protein [Populus trichocarpa] gi|2...   126   3e-27
ref|XP_002269366.1| PREDICTED: uncharacterized protein LOC100247...   123   3e-26
ref|XP_002522385.1| COR413-PM2, putative [Ricinus communis] gi|2...    81   2e-13
ref|XP_002310187.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
gb|ACN40406.1| unknown [Picea sitchensis] gi|224286270|gb|ACN408...    74   2e-11

>ref|XP_002310778.1| predicted protein [Populus trichocarpa] gi|222853681|gb|EEE91228.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  126 bits (316), Expect = 3e-27
 Identities = 70/154 (45%), Positives = 86/154 (55%)
 Frame = -1

Query: 497 EDASLKARSWFQWGGTISAIILLTLNWVRRSSRTQTSLLVAYLISSLPTILFNIFRGEFG 318
           E  S  AR+ FQWGGTI  I LL LN V R S  QT+LLV YL++S PT+LF + RG+FG
Sbjct: 20  ESRSSWARASFQWGGTIFTIFLLILNRVGRKSSVQTTLLVFYLLTSFPTVLFKVVRGQFG 79

Query: 317 HWVAFLAAAGHLFFPRDLSVPRFVLFVITPSWVAHELHDTXXXXXXXXXXXXXXXXXXXX 138
           +W+AFLA A +LFFP    V RF+LFVI+P  +   L ++                    
Sbjct: 80  YWIAFLAIAANLFFPETFPVSRFILFVISPDRLVDGLRNSIAGAIFCLLIGISSVIMEIR 139

Query: 137 XXXXXXXXXXXXXCFSYCLGISFLFFFTILYLWL 36
                        C+ YCL ISFLFFFTI YL L
Sbjct: 140 EIAGNRILECSFLCWGYCLAISFLFFFTIKYLCL 173


>ref|XP_002269366.1| PREDICTED: uncharacterized protein LOC100247855 [Vitis vinifera]
           gi|297735220|emb|CBI17582.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score =  123 bits (308), Expect = 3e-26
 Identities = 69/161 (42%), Positives = 88/161 (54%)
 Frame = -1

Query: 518 NSLKSSDEDASLKARSWFQWGGTISAIILLTLNWVRRSSRTQTSLLVAYLISSLPTILFN 339
           +S + +   ++   R+ FQWGGTISA  LL LN V R S  Q+SLLV +L++S P +LFN
Sbjct: 27  SSSQQTFSSSTTGGRAAFQWGGTISATFLLILNQVGRRSSIQSSLLVLFLLTSFPAVLFN 86

Query: 338 IFRGEFGHWVAFLAAAGHLFFPRDLSVPRFVLFVITPSWVAHELHDTXXXXXXXXXXXXX 159
           I RG+ G W AFLA A +LFFPR   V  F+L V TP W+A+ L D+             
Sbjct: 87  IVRGQIGRWFAFLAVAANLFFPRKFPVAGFILLVATPDWLANGLRDSIVGGVFCLLLGVC 146

Query: 158 XXXXXXXXXXXXXXXXXXXXCFSYCLGISFLFFFTILYLWL 36
                               CF + + ISFLFFFTILYL L
Sbjct: 147 LVITEIRGIGGCSRCECNLLCFGFSVCISFLFFFTILYLCL 187


>ref|XP_002522385.1| COR413-PM2, putative [Ricinus communis] gi|223538463|gb|EEF40069.1|
           COR413-PM2, putative [Ricinus communis]
          Length = 207

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 15/131 (11%)
 Frame = -1

Query: 548 GMENLVVGFVNSLKSSDEDASLKAR---------SWFQWGGTISAIILLTLNWVRRSSRT 396
           G +NL+   +N LK + +     A          S+ +W  + +AI LL L+     +  
Sbjct: 19  GNDNLIQSDINELKVAAKKLINDATRLGGLGFGTSFLKWVSSFAAIYLLVLDRTNWRTNM 78

Query: 395 QTSLLVAYLISSLPTILFNIFRGEFGHWVAFLAAAGHLFFPRD----LSVP--RFVLFVI 234
            TSLLV Y+  SLP++LFN FRGE G W+AF+A    LFFPR     L +P    +L V+
Sbjct: 79  LTSLLVPYIFFSLPSVLFNFFRGEVGKWIAFIAVVLRLFFPRHFPDWLEMPGSLILLLVV 138

Query: 233 TPSWVAHELHD 201
            PS+ AH L D
Sbjct: 139 APSFFAHTLKD 149


>ref|XP_002310187.1| predicted protein [Populus trichocarpa] gi|222853090|gb|EEE90637.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 49/126 (38%), Positives = 67/126 (53%), Gaps = 15/126 (11%)
 Frame = -1

Query: 539 NLVVGFVNSLKSSDEDASLKAR---------SWFQWGGTISAIILLTLNWVRRSSRTQTS 387
           NL+   VN LK + +     A          S+ +W  + +AI LL L+     S   TS
Sbjct: 18  NLIESDVNELKVAAKKLIKDAAKLGGLGFGTSFLKWVASFAAIYLLILDRTNWRSNMLTS 77

Query: 386 LLVAYLISSLPTILFNIFRGEFGHWVAFLAAAGHLFFPRD----LSVPR--FVLFVITPS 225
           LLV Y+  SLP++LFN FRGE G W+AF+A    LFFPR     L +P    +L V+ P+
Sbjct: 78  LLVPYIFFSLPSVLFNFFRGEVGRWIAFVAVVLRLFFPRHFPDWLEMPGSIILLLVVAPN 137

Query: 224 WVAHEL 207
           + AH L
Sbjct: 138 FFAHTL 143


>gb|ACN40406.1| unknown [Picea sitchensis] gi|224286270|gb|ACN40844.1| unknown
           [Picea sitchensis]
          Length = 202

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
 Frame = -1

Query: 473 SWFQWGGTISAIILLTLNWVRRSSRTQTSLLVAYLISSLPTILFNIFRGEFGHWVAFLAA 294
           S  QW  TI+AI LL L+     +   TSLLV Y+  +LP+++FNIFRGE G W+AF+A 
Sbjct: 49  SLLQWLATIAAIYLLVLDRTNWRTNMLTSLLVPYIFLNLPSLIFNIFRGEIGKWIAFVAV 108

Query: 293 AGHLFFPRD----LSVP--RFVLFVITP 228
              LFFPR     L +P    +L V+TP
Sbjct: 109 VLRLFFPRHFPDWLEMPGSLILLLVVTP 136


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