BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019675
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307783.1| predicted protein [Populus trichocarpa] gi|2...   274   1e-71
ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 ...   272   4e-71
ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [...   271   9e-71
ref|XP_002888409.1| hypothetical protein ARALYDRAFT_894100 [Arab...   256   3e-66
ref|XP_002893932.1| hypothetical protein ARALYDRAFT_473739 [Arab...   255   4e-66

>ref|XP_002307783.1| predicted protein [Populus trichocarpa] gi|222857232|gb|EEE94779.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  274 bits (700), Expect = 1e-71
 Identities = 127/161 (78%), Positives = 142/161 (88%)
 Frame = -1

Query: 629  PIFSSDDINSDKHKMERFLHAGRFSIASVYAPISFPPLPLIVLKREDEADAQPAVVAVGS 450
            P+FS+DD+NSDKHKMERFLHAGRFS+AS+YAPISFPPLPLIVLK   E  A PA+ AVGS
Sbjct: 636  PVFSTDDMNSDKHKMERFLHAGRFSVASIYAPISFPPLPLIVLKSA-EGSAAPAIAAVGS 694

Query: 449  LRSIDPDXXXXXXXXLTGYPQRVSKLKATVRYMFHTPEDVRWFKPVEVWSKCGRRGRVKE 270
            LRSIDPD        LTGYPQRVSKLKA+VRYMFH+PEDVRWFKPVEV++KCGR GR+KE
Sbjct: 695  LRSIDPDRIILKKIVLTGYPQRVSKLKASVRYMFHSPEDVRWFKPVEVYTKCGRHGRIKE 754

Query: 269  PVGTHGAMKCIFNGIVQQHDTVCMSLFKRVYPKWPEQRFPL 147
            PVGTHGAMKC FNG++QQHDTVCMSL+KR YPKWPE RFP+
Sbjct: 755  PVGTHGAMKCTFNGVLQQHDTVCMSLYKRAYPKWPEHRFPI 795



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  VKCILNGIVQEHDTVCMSLFKRVYPKWPEQR 1
           +KC  NG++Q+HDTVCMSL+KR YPKWPE R
Sbjct: 762 MKCTFNGVLQQHDTVCMSLYKRAYPKWPEHR 792


>ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 homolog [Vitis vinifera]
            gi|297745545|emb|CBI40710.3| unnamed protein product
            [Vitis vinifera]
          Length = 801

 Score =  272 bits (695), Expect = 4e-71
 Identities = 127/161 (78%), Positives = 139/161 (86%)
 Frame = -1

Query: 629  PIFSSDDINSDKHKMERFLHAGRFSIASVYAPISFPPLPLIVLKREDEADAQPAVVAVGS 450
            PIFSSD++NSDKHKME+FLHAGRFSIASVYAPISF PLPLI LK  ++  A PAVVA GS
Sbjct: 638  PIFSSDNMNSDKHKMEKFLHAGRFSIASVYAPISFTPLPLIALKSVNDVAASPAVVAFGS 697

Query: 449  LRSIDPDXXXXXXXXLTGYPQRVSKLKATVRYMFHTPEDVRWFKPVEVWSKCGRRGRVKE 270
            LR +DPD        LTGYPQRVSKLKA VRYMFH+P+DVRWFKPVEVW+KCGRRGRVKE
Sbjct: 698  LRCVDPDRIILKKIILTGYPQRVSKLKAAVRYMFHSPDDVRWFKPVEVWTKCGRRGRVKE 757

Query: 269  PVGTHGAMKCIFNGIVQQHDTVCMSLFKRVYPKWPEQRFPL 147
            PVGTHG MKCIFNG++QQHDTVCMSL+KR YPKWPE  FPL
Sbjct: 758  PVGTHGTMKCIFNGVLQQHDTVCMSLYKRTYPKWPEHGFPL 798



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = -3

Query: 93  VKCILNGIVQEHDTVCMSLFKRVYPKWPE 7
           +KCI NG++Q+HDTVCMSL+KR YPKWPE
Sbjct: 765 MKCIFNGVLQQHDTVCMSLYKRTYPKWPE 793


>ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [Ricinus communis]
            gi|223551363|gb|EEF52849.1| ribosome biogenesis protein
            tsr1, putative [Ricinus communis]
          Length = 792

 Score =  271 bits (692), Expect = 9e-71
 Identities = 126/161 (78%), Positives = 140/161 (86%)
 Frame = -1

Query: 629  PIFSSDDINSDKHKMERFLHAGRFSIASVYAPISFPPLPLIVLKREDEADAQPAVVAVGS 450
            PIFS+D+INSDKHKMERFLHAG+FS+AS+YAPISFP LPL+VLK   E  A P + AVGS
Sbjct: 630  PIFSTDNINSDKHKMERFLHAGQFSVASIYAPISFPSLPLVVLKHA-EGGAAPTLAAVGS 688

Query: 449  LRSIDPDXXXXXXXXLTGYPQRVSKLKATVRYMFHTPEDVRWFKPVEVWSKCGRRGRVKE 270
            LRSIDPD        LTGYPQRVSKLKA+VRYMFH PEDVRWFKPVEVW+KCGRRGR+KE
Sbjct: 689  LRSIDPDRTILKRIILTGYPQRVSKLKASVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKE 748

Query: 269  PVGTHGAMKCIFNGIVQQHDTVCMSLFKRVYPKWPEQRFPL 147
            PVGTHGAMKCI NG++QQHDTVCMSL+KR YPKWPE RFP+
Sbjct: 749  PVGTHGAMKCILNGVLQQHDTVCMSLYKRAYPKWPEHRFPI 789



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = -3

Query: 93  VKCILNGIVQEHDTVCMSLFKRVYPKWPEQR 1
           +KCILNG++Q+HDTVCMSL+KR YPKWPE R
Sbjct: 756 MKCILNGVLQQHDTVCMSLYKRAYPKWPEHR 786


>ref|XP_002888409.1| hypothetical protein ARALYDRAFT_894100 [Arabidopsis lyrata subsp.
            lyrata] gi|297334250|gb|EFH64668.1| hypothetical protein
            ARALYDRAFT_894100 [Arabidopsis lyrata subsp. lyrata]
          Length = 792

 Score =  256 bits (653), Expect = 3e-66
 Identities = 116/160 (72%), Positives = 138/160 (86%)
 Frame = -1

Query: 629  PIFSSDDINSDKHKMERFLHAGRFSIASVYAPISFPPLPLIVLKREDEADAQPAVVAVGS 450
            P+FS+D+ +SDKHKMERFLH+G FS+AS+Y PISFPPLPL+ LK  + +D  PAV A+GS
Sbjct: 632  PVFSTDNFSSDKHKMERFLHSGSFSLASIYGPISFPPLPLVALKISEGSD--PAVAALGS 689

Query: 449  LRSIDPDXXXXXXXXLTGYPQRVSKLKATVRYMFHTPEDVRWFKPVEVWSKCGRRGRVKE 270
            L+SI+P+        LTGYPQRVSK+KA+VRYMFH PEDV+WFKPVEVWSKCGRRGRVKE
Sbjct: 690  LKSIEPNKIILKKIILTGYPQRVSKMKASVRYMFHNPEDVKWFKPVEVWSKCGRRGRVKE 749

Query: 269  PVGTHGAMKCIFNGIVQQHDTVCMSLFKRVYPKWPEQRFP 150
            PVGTHGAMKCIFNG+VQQHD VCM+L+KR YPKWPE+ +P
Sbjct: 750  PVGTHGAMKCIFNGVVQQHDIVCMNLYKRAYPKWPERLYP 789



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = -3

Query: 93  VKCILNGIVQEHDTVCMSLFKRVYPKWPEQ 4
           +KCI NG+VQ+HD VCM+L+KR YPKWPE+
Sbjct: 757 MKCIFNGVVQQHDIVCMNLYKRAYPKWPER 786


>ref|XP_002893932.1| hypothetical protein ARALYDRAFT_473739 [Arabidopsis lyrata subsp.
            lyrata] gi|297339774|gb|EFH70191.1| hypothetical protein
            ARALYDRAFT_473739 [Arabidopsis lyrata subsp. lyrata]
          Length = 799

 Score =  255 bits (652), Expect = 4e-66
 Identities = 116/160 (72%), Positives = 138/160 (86%)
 Frame = -1

Query: 629  PIFSSDDINSDKHKMERFLHAGRFSIASVYAPISFPPLPLIVLKREDEADAQPAVVAVGS 450
            P+FS+D+ +SDKHKMERFLH GRFS+AS+Y PISFPPLPL+VLK  + ++  PAV A+GS
Sbjct: 638  PVFSTDNFSSDKHKMERFLHPGRFSLASIYGPISFPPLPLVVLKISEGSNT-PAVAALGS 696

Query: 449  LRSIDPDXXXXXXXXLTGYPQRVSKLKATVRYMFHTPEDVRWFKPVEVWSKCGRRGRVKE 270
            L+S+D +        LTGYPQRVSK+KA+VRYMFH PEDV+WFKPVEVWSKCGRRGRVKE
Sbjct: 697  LKSVDTNKIILKKIILTGYPQRVSKMKASVRYMFHNPEDVKWFKPVEVWSKCGRRGRVKE 756

Query: 269  PVGTHGAMKCIFNGIVQQHDTVCMSLFKRVYPKWPEQRFP 150
            PVGTHGAMKCIFNG+VQQHD VCM+L+KR YPKWPE+ +P
Sbjct: 757  PVGTHGAMKCIFNGVVQQHDIVCMNLYKRAYPKWPERLYP 796



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 21/30 (70%), Positives = 27/30 (90%)
 Frame = -3

Query: 93  VKCILNGIVQEHDTVCMSLFKRVYPKWPEQ 4
           +KCI NG+VQ+HD VCM+L+KR YPKWPE+
Sbjct: 764 MKCIFNGVVQQHDIVCMNLYKRAYPKWPER 793