BLASTX nr result

ID: Cimicifuga21_contig00019665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019665
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37626.3| unnamed protein product [Vitis vinifera]               76   4e-12
ref|XP_002272192.1| PREDICTED: uncharacterized protein LOC100259...    76   4e-12
ref|XP_002329508.1| predicted protein [Populus trichocarpa] gi|2...    70   4e-10
ref|XP_002530079.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
ref|XP_002441875.1| hypothetical protein SORBIDRAFT_08g004010 [S...    68   1e-09

>emb|CBI37626.3| unnamed protein product [Vitis vinifera]
          Length = 871

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 40/85 (47%), Positives = 52/85 (61%)
 Frame = -3

Query: 593 SKPRAIPKAIVNRIRQILYSYPKGVYIXXXXXXXXXXSVPMDKDFFGYKKFSLLLKSLPT 414
           SK R IP+ ++ +IR IL SYPKGV I          +V +DKDF+GY+KFS  L S+P 
Sbjct: 250 SKLRPIPRIVMRQIRHILNSYPKGVSITELRSELGKSNVKIDKDFYGYRKFSHFLLSMPH 309

Query: 413 VLKIQIAADGQIFVHGIQPRIAEPV 339
           +LK+Q   DGQ  V  I  +  EPV
Sbjct: 310 ILKLQSRGDGQYCVQRIASKAPEPV 334


>ref|XP_002272192.1| PREDICTED: uncharacterized protein LOC100259153 [Vitis vinifera]
          Length = 990

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 40/85 (47%), Positives = 52/85 (61%)
 Frame = -3

Query: 593 SKPRAIPKAIVNRIRQILYSYPKGVYIXXXXXXXXXXSVPMDKDFFGYKKFSLLLKSLPT 414
           SK R IP+ ++ +IR IL SYPKGV I          +V +DKDF+GY+KFS  L S+P 
Sbjct: 250 SKLRPIPRIVMRQIRHILNSYPKGVSITELRSELGKSNVKIDKDFYGYRKFSHFLLSMPH 309

Query: 413 VLKIQIAADGQIFVHGIQPRIAEPV 339
           +LK+Q   DGQ  V  I  +  EPV
Sbjct: 310 ILKLQSRGDGQYCVQRIASKAPEPV 334


>ref|XP_002329508.1| predicted protein [Populus trichocarpa] gi|222870188|gb|EEF07319.1|
           predicted protein [Populus trichocarpa]
          Length = 998

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 48/140 (34%), Positives = 68/140 (48%)
 Frame = -3

Query: 584 RAIPKAIVNRIRQILYSYPKGVYIXXXXXXXXXXSVPMDKDFFGYKKFSLLLKSLPTVLK 405
           R IPKA++ +I  IL S P+G+ I           V +DKD +GYKKFS  L S+P +LK
Sbjct: 258 RPIPKAVMKKICHILSSCPEGMSITDLRIELMKSKVSVDKDLYGYKKFSRFLLSMPHILK 317

Query: 404 IQIAADGQIFVHGIQPRIAEPVAQPKVAEPFQQPKVTEQRDQPKVAGQIHQPKVAERVDQ 225
           ++   DGQ  V G+  +  EP  QP + +    P   +   QP               ++
Sbjct: 318 LKDNGDGQFNVRGVTVKAPEPF-QPGLCK--STPTAIDNGSQPITRSS------KSNSEE 368

Query: 224 PKASGPLDLPKLAKPVDSKL 165
              SGP+D  KL+ P   KL
Sbjct: 369 ISVSGPVD-GKLSLPSSPKL 387


>ref|XP_002530079.1| conserved hypothetical protein [Ricinus communis]
           gi|223530432|gb|EEF32319.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 952

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 32/77 (41%), Positives = 46/77 (59%)
 Frame = -3

Query: 593 SKPRAIPKAIVNRIRQILYSYPKGVYIXXXXXXXXXXSVPMDKDFFGYKKFSLLLKSLPT 414
           +K R IP+ ++ RIR +L  YPKG+ I           + +DKD +GYKKF   L S+P 
Sbjct: 256 TKFRPIPRTVMKRIRDVLSLYPKGISIHELRSELGKSDIGIDKDLYGYKKFFRFLLSMPN 315

Query: 413 VLKIQIAADGQIFVHGI 363
           +LK+  A+DGQ+   GI
Sbjct: 316 ILKLHTASDGQLIARGI 332


>ref|XP_002441875.1| hypothetical protein SORBIDRAFT_08g004010 [Sorghum bicolor]
           gi|241942568|gb|EES15713.1| hypothetical protein
           SORBIDRAFT_08g004010 [Sorghum bicolor]
          Length = 997

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
 Frame = -3

Query: 593 SKPRAIPKAIVNRIRQILYSYPKGVYIXXXXXXXXXXSVPMDKDFFGYKKFSLLLKSLPT 414
           +KP + PK + N I ++L SYP+G+ I          S+ +D DFFG+KKFS LL+S+P 
Sbjct: 252 TKPSSAPKYVTNAILEVLRSYPEGMRISELRGQLIKNSIDLDTDFFGHKKFSRLLESMPN 311

Query: 413 VLK-IQIAADGQIFVHGIQPRIAEPVAQPKVAEPFQQPKVTEQRDQPKVAGQIHQPKVAE 237
           V+K +   ++ Q++   +  R+ +P     + +PF    + ++ ++P     I  P  ++
Sbjct: 312 VVKLVDHPSENQLYAIPVNKRLLQP-GDRALDDPF----LEKESEEP-----IKVPTESQ 361

Query: 236 RVDQPKASGPLDLPKLAK 183
               P  + P  +PK  K
Sbjct: 362 HCSVPSDTKPSSVPKYVK 379


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