BLASTX nr result

ID: Cimicifuga21_contig00019632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019632
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869574.1| hypothetical protein ARALYDRAFT_354079 [Arab...    94   8e-17
ref|XP_002325714.1| BED finger-nbs-lrr resistance protein [Popul...    90   1e-15
ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichoca...    90   1e-15
ref|XP_002337475.1| predicted protein [Populus trichocarpa] gi|2...    89   2e-15
ref|XP_002335262.1| predicted protein [Populus trichocarpa] gi|2...    89   2e-15

>ref|XP_002869574.1| hypothetical protein ARALYDRAFT_354079 [Arabidopsis lyrata subsp.
           lyrata] gi|297315410|gb|EFH45833.1| hypothetical protein
           ARALYDRAFT_354079 [Arabidopsis lyrata subsp. lyrata]
          Length = 542

 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 60/129 (46%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
 Frame = +2

Query: 5   NQIERLDAVPFNRPNVSTLLLQDNPITHIFP-SFFSRISALEILDISYSWITELPPSLSE 181
           N++++L         +S LLLQ N      P  F     AL IL++S + I+ LP SLSE
Sbjct: 76  NKLKKLPDQVVECVELSALLLQGNFHLEALPVGFLLSFPALRILNLSGTRISSLPLSLSE 135

Query: 182 LAKLRVLFLHYCRSLKKIPSLEKLKELQVLTLCGTLITEMPHGMEGLISLRSLDLSDTTK 361
           L +LR L L  C  L+++PSLEKL ++QVL LC T I E+P G+E L SLR LDLS T  
Sbjct: 136 LHELRSLILRDCYYLEEVPSLEKLTKIQVLDLCATRIKELPTGLETLNSLRLLDLSRTHH 195

Query: 362 LASIRVGLI 388
           L SI  G+I
Sbjct: 196 LESIPAGII 204


>ref|XP_002325714.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862589|gb|EEF00096.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1010

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 70/219 (31%), Positives = 112/219 (51%), Gaps = 9/219 (4%)
 Frame = +2

Query: 2    RNQIERLDAVPFNR-PNVSTLLLQDNP-ITHIFPSFFSRISALEILDISYSWITELPPSL 175
            +NQIE + +    R P++STLLL+ N  +  I  SFF ++  L++LD+SY+ IT+LP S+
Sbjct: 538  QNQIEEIPSTHSPRCPSLSTLLLRYNSELQFIADSFFEQLHGLKVLDLSYTGITKLPDSV 597

Query: 176  SELAKLRVLFLHYCRSLKKIPSLEKLKELQVLTLCGT-LITEMPHGMEGLISLRSLDLSD 352
            SEL  L  L L  C+ L+ +PSLEKL+ L+ L L GT  + ++P GME L +LR L ++ 
Sbjct: 598  SELVSLTALLLIGCKMLRHVPSLEKLRVLKRLDLSGTRALEKIPQGMECLCNLRHLRMNG 657

Query: 353  TTKLASIRVGLIXXXXXXXXXXMQ-----GSGFSKLDSPMVANYL-MEMRSLKRLAILTL 514
              +      GL+          ++     G+  ++   P        E+  L++L  L  
Sbjct: 658  CGE-KEFPSGLLPKLSHLQVFVLEEWIPPGTKDNRRGQPAPLTVKGKEVGCLRKLESLVC 716

Query: 515  SIVGYGDHLETIMCLQGQNLKTFSVNVYGSIEDYIEDVE 631
               GY D++E I         T    + G ++ Y  D +
Sbjct: 717  HFEGYSDYVEFIKSRDETKSLTTYQTLVGPLDKYDYDYD 755


>ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834654|gb|EEE73117.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 674

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 3/201 (1%)
 Frame = +2

Query: 2    RNQIERLDAVPFNR-PNVSTLLL-QDNPITHIFPSFFSRISALEILDISYSWITELPPSL 175
            RN I+ + +    R P++S LLL +++ +  I  SFF ++  L++LD+SY+ IT+LP S+
Sbjct: 449  RNHIKEIPSSHSPRCPSLSILLLCRNSELQFIANSFFKQLHGLKVLDLSYTGITKLPDSV 508

Query: 176  SELAKLRVLFLHYCRSLKKIPSLEKLKELQVLTLCGTLITEMPHGMEGLISLRSLDLSDT 355
            SEL  L  L L  C+ L+ +PSLEKL+ L+ L L GT + ++P GME L +L+ L ++  
Sbjct: 509  SELVSLTTLLLIDCKMLRHVPSLEKLRALKRLDLSGTALEKIPQGMECLYNLKYLRMNGC 568

Query: 356  TKLASIRVGLIXXXXXXXXXXMQGSGFSKLDSPMVANYLMEMRSLKRLAILTLSIVGYGD 535
             +      GL+          +   G       +      E+  L++L  L     GY +
Sbjct: 569  GE-KEFPSGLLPKLSHLQVFELDNRGGQYASITVKGK---EVACLRKLESLRCQFEGYSE 624

Query: 536  HLETIMCL-QGQNLKTFSVNV 595
            ++E +    + Q+L T+ ++V
Sbjct: 625  YVEYLKSRDETQSLSTYQISV 645


>ref|XP_002337475.1| predicted protein [Populus trichocarpa] gi|222839429|gb|EEE77766.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 2/186 (1%)
 Frame = +2

Query: 44  PNVSTLLLQDNP-ITHIFPSFFSRISALEILDISYSWITELPPSLSELAKLRVLFLHYCR 220
           PN+S+LLL+DN  +  I  SFF ++  L++LD+S + I  LP S+S+L  L  L L  C 
Sbjct: 72  PNLSSLLLRDNEGLRSIADSFFKQLHGLKVLDLSCTVIKNLPESVSDLMSLTALLLDGCW 131

Query: 221 SLKKIPSLEKLKELQVLTLCGTLITEMPHGMEGLISLRSLDLSDTTKLASIRVGLIXXXX 400
            L+ +PSL+KLK L+ L L  T++ +MP GME L +LR L ++   +      G++    
Sbjct: 132 KLRYVPSLKKLKALKRLDLSWTMLEKMPQGMECLSNLRYLRMNGCGE-KEFPNGILPKLS 190

Query: 401 XXXXXXMQGSGFSKLDSPMVANYLMEMRSLKRLAILTLSIVGYGDHLETIMCLQG-QNLK 577
                 ++   F +  +P+      E+ SL+ L  L     G  D +E + C  G Q+L 
Sbjct: 191 HLQVFVLE-EVFEECYAPITIKG-KEVVSLRNLETLECHFEGLSDFIEFLRCRDGIQSLS 248

Query: 578 TFSVNV 595
           T+ ++V
Sbjct: 249 TYRISV 254


>ref|XP_002335262.1| predicted protein [Populus trichocarpa] gi|222833168|gb|EEE71645.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
 Frame = +2

Query: 2   RNQIERLDAVPFNR-PNVSTLLLQDNP-ITHIFPSFFSRISALEILDISYSWITELPPSL 175
           RN+IE + +    R P +STL L DN  +  I  SFF ++  L++LD+S + I  LP S+
Sbjct: 70  RNEIEEIPSSYSPRCPYLSTLFLCDNEGLGFIADSFFKQLHGLKVLDLSGTGIENLPDSV 129

Query: 176 SELAKLRVLFLHYCRSLKKIPSLEKLKELQVLTLCGTLITEMPHGMEGLISLRSLDLSDT 355
           S+L  L  L L  C +L+ +PSLEKL+ L+ L L GT + +MP GME L +LR L ++  
Sbjct: 130 SDLVSLTALLLKKCENLRHVPSLEKLRALKRLDLYGTPLKKMPQGMECLTNLRYLRMNGC 189

Query: 356 TKLASIRVGLIXXXXXXXXXXMQGSGFSKLDSPMVANYLMEMRSLKRLAILTLSIVGYGD 535
            +      G++          ++       D   +     E+ SL+ L  L     G+ D
Sbjct: 190 GE-KEFPSGILPKLSHLQVFVLEELMGECSDYAPITVKGKEVGSLRNLESLECHFKGFSD 248

Query: 536 HLETIMCLQG-QNLKTFSVNVYGSIEDY 616
            +E +    G Q+L T+ ++V    E Y
Sbjct: 249 FVEYLRSRDGIQSLSTYRISVGMLDESY 276


Top