BLASTX nr result

ID: Cimicifuga21_contig00019616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019616
         (1206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275679.1| PREDICTED: probable glucuronoxylan glucurono...   547   e-153
ref|XP_002314302.1| predicted protein [Populus trichocarpa] gi|2...   533   e-149
gb|AAX33322.1| secondary cell wall-related glycosyltransferase f...   529   e-148
ref|XP_003538175.1| PREDICTED: probable glucuronoxylan glucurono...   526   e-147
ref|XP_003539788.1| PREDICTED: probable glucuronoxylan glucurono...   526   e-147

>ref|XP_002275679.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7
            [Vitis vinifera] gi|297734915|emb|CBI17149.3| unnamed
            protein product [Vitis vinifera]
          Length = 460

 Score =  547 bits (1410), Expect = e-153
 Identities = 259/335 (77%), Positives = 293/335 (87%), Gaps = 6/335 (1%)
 Frame = -3

Query: 1204 SNKRCSNHLFASEVAIHKALIDSDVRTLDPYEADFFFVPVYVSCNFSTINGFPALGHARP 1025
            SN+RCSNHLFASEVA+HKAL +SDVRT DP+EADFFFVPVYVSCNFST+NGFPA+GHARP
Sbjct: 116  SNERCSNHLFASEVALHKALQESDVRTFDPWEADFFFVPVYVSCNFSTVNGFPAIGHARP 175

Query: 1024 LLASAVQLISTQFPFWNQSHGSDHIFVASHDYGACFHAMEDVAIADGVPLFLKKSIILQT 845
            LLASA+Q ISTQ PFWN+S G+DH+FVASHDYGACFHAMEDVA ADG+P FLKKSIILQT
Sbjct: 176  LLASAIQHISTQLPFWNRSLGADHVFVASHDYGACFHAMEDVARADGIPEFLKKSIILQT 235

Query: 844  FGVEYRHPCQDVENVLIPPYISPESVRSTLEMMPRKDKRDIRVFFRGKMEVHPKNVSGRF 665
            FGV+++HPCQDVENVLIPPY+SPE V+STL+  P   +RDI VFFRGKMEVHPKN+SGRF
Sbjct: 236  FGVKHQHPCQDVENVLIPPYVSPEKVQSTLDSAPANGQRDIWVFFRGKMEVHPKNISGRF 295

Query: 664  YSKKVRTIIWQKFNRHKKFYLKRHRFDGYQSEIARSVFCLCPLGWAPWSPRLVESVALGC 485
            YSK VRT IWQK+  ++KFYLKRHRF GYQSEI RSVFCLCPLGWAPWSPRLVESV LGC
Sbjct: 296  YSKAVRTAIWQKYGGNRKFYLKRHRFAGYQSEIVRSVFCLCPLGWAPWSPRLVESVVLGC 355

Query: 484  IPVIIADGIRLPFSNTLRWSDISLTVAEKDVGDLANILEHVVKTNLTTIQRNLWDPVNTR 305
            +PVIIADGIRLPFS  +RW +ISLTVAEKDVG L  ILE V  TNL+TIQ+NLWDP N R
Sbjct: 356  VPVIIADGIRLPFSEAIRWPEISLTVAEKDVGKLGMILEDVAATNLSTIQKNLWDPENKR 415

Query: 304  AMMFNDHIQHGDATWQVLHVL------SQKRSRRS 218
            A++FN+ +Q GDATWQVL+ L      S +RSR+S
Sbjct: 416  ALLFNNQVQEGDATWQVLNALWHKLDRSHRRSRQS 450


>ref|XP_002314302.1| predicted protein [Populus trichocarpa] gi|222850710|gb|EEE88257.1|
            predicted protein [Populus trichocarpa]
          Length = 462

 Score =  533 bits (1372), Expect = e-149
 Identities = 246/328 (75%), Positives = 289/328 (88%), Gaps = 1/328 (0%)
 Frame = -3

Query: 1204 SNKRCSNHLFASEVAIHKALIDS-DVRTLDPYEADFFFVPVYVSCNFSTINGFPALGHAR 1028
            +N+RCSNHLFASEVAIHKAL +S D+RT DPYEADFFFVPVYVSCNFST+NGFPA+GHAR
Sbjct: 125  ANERCSNHLFASEVAIHKALSNSLDIRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGHAR 184

Query: 1027 PLLASAVQLISTQFPFWNQSHGSDHIFVASHDYGACFHAMEDVAIADGVPLFLKKSIILQ 848
             LL+SAVQLIS+ +PFWN+S GSDH+FVASHDYGACFHAME+ A+ DG+P FLK+SIILQ
Sbjct: 185  SLLSSAVQLISSNYPFWNRSQGSDHVFVASHDYGACFHAMEERAMEDGIPEFLKRSIILQ 244

Query: 847  TFGVEYRHPCQDVENVLIPPYISPESVRSTLEMMPRKDKRDIRVFFRGKMEVHPKNVSGR 668
            TFGV++ HPCQDVENV+IPPYISPE VR+TLE  P   +RDI  FFRGKMEVHPKN+SGR
Sbjct: 245  TFGVKFNHPCQDVENVVIPPYISPERVRTTLENYPLNGRRDIWAFFRGKMEVHPKNISGR 304

Query: 667  FYSKKVRTIIWQKFNRHKKFYLKRHRFDGYQSEIARSVFCLCPLGWAPWSPRLVESVALG 488
            +YSKKVRT+IW+K++  ++FYL+RHRF GYQSEI RSVFCLCPLGWAPWSPRLVESVALG
Sbjct: 305  YYSKKVRTVIWRKYSGDRRFYLQRHRFAGYQSEIVRSVFCLCPLGWAPWSPRLVESVALG 364

Query: 487  CIPVIIADGIRLPFSNTLRWSDISLTVAEKDVGDLANILEHVVKTNLTTIQRNLWDPVNT 308
            C+PVIIADGIRLPF   +RWS+ISLTVAEKDV +L  +L+HV  TNL+ IQ+NLWDP   
Sbjct: 365  CVPVIIADGIRLPFPTAVRWSEISLTVAEKDVANLGTLLDHVAATNLSAIQKNLWDPDVR 424

Query: 307  RAMMFNDHIQHGDATWQVLHVLSQKRSR 224
            RA++FND +Q GDATWQVL+ L++K  R
Sbjct: 425  RALLFNDRVQEGDATWQVLYALARKLDR 452


>gb|AAX33322.1| secondary cell wall-related glycosyltransferase family 47 [Populus
            tremula x Populus tremuloides]
          Length = 442

 Score =  529 bits (1362), Expect = e-148
 Identities = 247/328 (75%), Positives = 287/328 (87%), Gaps = 1/328 (0%)
 Frame = -3

Query: 1204 SNKRCSNHLFASEVAIHKALIDS-DVRTLDPYEADFFFVPVYVSCNFSTINGFPALGHAR 1028
            +N+RCSNHLFASEVAIHKAL  S DVRT DPYEADFFFVPVYVSCNFST+NGFPA+GHAR
Sbjct: 105  ANERCSNHLFASEVAIHKALSSSLDVRTFDPYEADFFFVPVYVSCNFSTVNGFPAIGHAR 164

Query: 1027 PLLASAVQLISTQFPFWNQSHGSDHIFVASHDYGACFHAMEDVAIADGVPLFLKKSIILQ 848
             LL+SAVQLIS+ +PFWN+S GSDH+FVASHDYGACFHAME+ A+ DG+P FLK+SIILQ
Sbjct: 165  SLLSSAVQLISSNYPFWNRSQGSDHVFVASHDYGACFHAMEERAMEDGIPEFLKRSIILQ 224

Query: 847  TFGVEYRHPCQDVENVLIPPYISPESVRSTLEMMPRKDKRDIRVFFRGKMEVHPKNVSGR 668
            TFGV++ HPCQDVENV+IPPYISP SVR+TLE  P   +RDI  FFRGKMEVHPKN+SGR
Sbjct: 225  TFGVKFNHPCQDVENVVIPPYISPGSVRTTLEKYPLTGRRDIWAFFRGKMEVHPKNISGR 284

Query: 667  FYSKKVRTIIWQKFNRHKKFYLKRHRFDGYQSEIARSVFCLCPLGWAPWSPRLVESVALG 488
            +YSKKVRT+IW+K++  ++FYL+RHRF GYQSEI RSVFCLCPLGWAPWSPRLVESVALG
Sbjct: 285  YYSKKVRTVIWRKYSGDRRFYLQRHRFAGYQSEIVRSVFCLCPLGWAPWSPRLVESVALG 344

Query: 487  CIPVIIADGIRLPFSNTLRWSDISLTVAEKDVGDLANILEHVVKTNLTTIQRNLWDPVNT 308
            C+PVIIADGIRLPF   +RWS+ISLTVAEKDV +L  +L+ V  TNL+ IQ+NLWDP   
Sbjct: 345  CVPVIIADGIRLPFPTAVRWSEISLTVAEKDVANLGTLLDQVAATNLSAIQKNLWDPDVR 404

Query: 307  RAMMFNDHIQHGDATWQVLHVLSQKRSR 224
            RA++FND +Q GDATWQVL+ L+QK  R
Sbjct: 405  RALLFNDPVQGGDATWQVLYALAQKLDR 432


>ref|XP_003538175.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like
            [Glycine max]
          Length = 460

 Score =  526 bits (1356), Expect = e-147
 Identities = 241/327 (73%), Positives = 286/327 (87%)
 Frame = -3

Query: 1204 SNKRCSNHLFASEVAIHKALIDSDVRTLDPYEADFFFVPVYVSCNFSTINGFPALGHARP 1025
            +N+RCS HLFASEVAIH+AL+ S+VRT DPY+ADFFFVPVYVSCNFST+NGFPA+GHAR 
Sbjct: 119  TNERCSKHLFASEVAIHRALLTSEVRTFDPYDADFFFVPVYVSCNFSTVNGFPAIGHARS 178

Query: 1024 LLASAVQLISTQFPFWNQSHGSDHIFVASHDYGACFHAMEDVAIADGVPLFLKKSIILQT 845
            L+ASAV LIS+++PFWN+S GSDH+FVASHD+G+CFH +EDVA+ADGVP  ++ SI+LQT
Sbjct: 179  LIASAVNLISSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMADGVPEIVRNSIVLQT 238

Query: 844  FGVEYRHPCQDVENVLIPPYISPESVRSTLEMMPRKDKRDIRVFFRGKMEVHPKNVSGRF 665
            FGV + HPCQ VE+V+IPPY+SPESVR T+E  P   +RDI  FFRGKMEVHPKNVSGRF
Sbjct: 239  FGVVFDHPCQKVEHVVIPPYVSPESVRDTMENFPVDGRRDIWAFFRGKMEVHPKNVSGRF 298

Query: 664  YSKKVRTIIWQKFNRHKKFYLKRHRFDGYQSEIARSVFCLCPLGWAPWSPRLVESVALGC 485
            YSK+VRT+IW+KFN  ++FYL+RHRF GYQSEIARSVFCLCPLGWAPWSPRLVESVALGC
Sbjct: 299  YSKEVRTVIWRKFNGDRRFYLQRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGC 358

Query: 484  IPVIIADGIRLPFSNTLRWSDISLTVAEKDVGDLANILEHVVKTNLTTIQRNLWDPVNTR 305
            +PV+IADGIRLPF + ++WS+IS+TVAEKDVG LA ILE V  TNL+TIQRNLWDP   R
Sbjct: 359  VPVVIADGIRLPFVSAVKWSEISVTVAEKDVGRLAEILERVAATNLSTIQRNLWDPATRR 418

Query: 304  AMMFNDHIQHGDATWQVLHVLSQKRSR 224
            A++FN  +Q GDATWQVL  LS+K  R
Sbjct: 419  ALLFNSQVQVGDATWQVLRALSEKLDR 445


>ref|XP_003539788.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like
            [Glycine max]
          Length = 461

 Score =  526 bits (1354), Expect = e-147
 Identities = 240/327 (73%), Positives = 284/327 (86%)
 Frame = -3

Query: 1204 SNKRCSNHLFASEVAIHKALIDSDVRTLDPYEADFFFVPVYVSCNFSTINGFPALGHARP 1025
            SN+RCS HLFASEVAIH+AL+ S+VRT DPY+ADFFFVPVYVSCNFST+NGFPA+GHAR 
Sbjct: 120  SNERCSKHLFASEVAIHRALLTSEVRTFDPYDADFFFVPVYVSCNFSTVNGFPAIGHARS 179

Query: 1024 LLASAVQLISTQFPFWNQSHGSDHIFVASHDYGACFHAMEDVAIADGVPLFLKKSIILQT 845
            L+ASAV L+S+++PFWN+S GSDH+FVASHD+G+CFH +EDVA+ADGVP  ++ SI+LQT
Sbjct: 180  LIASAVSLVSSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMADGVPEIMRNSIVLQT 239

Query: 844  FGVEYRHPCQDVENVLIPPYISPESVRSTLEMMPRKDKRDIRVFFRGKMEVHPKNVSGRF 665
            FGV Y HPCQ VE+V+IPPY+SPESVR T+E  P   +RDI  FFRGKME+HPKNVSGRF
Sbjct: 240  FGVVYDHPCQSVEHVVIPPYVSPESVRDTMENFPVNGRRDIWAFFRGKMELHPKNVSGRF 299

Query: 664  YSKKVRTIIWQKFNRHKKFYLKRHRFDGYQSEIARSVFCLCPLGWAPWSPRLVESVALGC 485
            YSKKVRT+IW+KFN  ++FYL+R RF GYQSEIARSVFCLCPLGWAPWSPRLVESVALGC
Sbjct: 300  YSKKVRTVIWRKFNGDRRFYLQRQRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGC 359

Query: 484  IPVIIADGIRLPFSNTLRWSDISLTVAEKDVGDLANILEHVVKTNLTTIQRNLWDPVNTR 305
            +PVIIADGIRLPF + ++W +IS+TVAEKDVG LA ILE V  TNL+TIQRNLWDPV   
Sbjct: 360  VPVIIADGIRLPFISAVKWPEISITVAEKDVGRLAEILERVAATNLSTIQRNLWDPVTRS 419

Query: 304  AMMFNDHIQHGDATWQVLHVLSQKRSR 224
            A++FN  +Q GDATWQ+L  LS+K  R
Sbjct: 420  ALLFNSQVQKGDATWQILRALSEKLDR 446


Top