BLASTX nr result

ID: Cimicifuga21_contig00019597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019597
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523293.1| ATP synthase delta chain, putative [Ricinus ...   183   7e-44
ref|XP_002320885.1| predicted protein [Populus trichocarpa] gi|2...   180   4e-43
gb|AFK44768.1| unknown [Lotus japonicus]                              172   1e-40
ref|NP_001235001.1| uncharacterized protein LOC100526851 [Glycin...   156   9e-36
ref|XP_004134294.1| PREDICTED: ATP synthase delta chain, chlorop...   150   4e-34

>ref|XP_002523293.1| ATP synthase delta chain, putative [Ricinus communis]
           gi|223537381|gb|EEF39009.1| ATP synthase delta chain,
           putative [Ricinus communis]
          Length = 227

 Score =  183 bits (464), Expect = 7e-44
 Identities = 109/228 (47%), Positives = 144/228 (63%)
 Frame = +3

Query: 69  METLSTSVSTLKLHGIPSTTPRELNLFKPPNPTHLLPPHSHLYNKLNPISNRPTSPFSNK 248
           M+TLS SVSTLKL  + S  PR+   FK P+ +  LPP +H   K N ISNR T+     
Sbjct: 1   MDTLSNSVSTLKLPALHSK-PRQFYHFKTPSASQQLPP-THFTTKPNSISNRNTN----- 53

Query: 249 ASFAYPFHSTTPTSSLKAKSPIVHTKATSGYAAALVDIARCNDALHIVEKDVKXXXXXXX 428
                   S T + S     P  H    +GYAAAL+DIA+ N++L  VEKDVK       
Sbjct: 54  -IQILSLKSLTNSPSFLKPPPNTHQNPATGYAAALLDIAQFNNSLETVEKDVKRLSKLLR 112

Query: 429 XXXXXAILVDPFVNDNMKGQVVKELLEKGRFQKHLVVVLKMLVEKNKVGMISGVLEEFKR 608
                 IL++P V D  KG V+KE+ +KG+F   LV +L ML+E+NK+ +++ VL EF+R
Sbjct: 113 NEQIQCILINPLVGDKEKGLVLKEVGKKGKFNSILVRLLTMLIERNKIMIVNEVLVEFQR 172

Query: 609 IYDDLNGTQVVLVSSSKKMQEDQLFGIVKKVQKMSGATKVKVRNLINE 752
           I+D+L+GT+VVLVSS KKM+ED LF I + VQK SGA KVKVRNL++E
Sbjct: 173 IFDELSGTKVVLVSSKKKMEEDALFRIAQSVQKFSGAVKVKVRNLVDE 220


>ref|XP_002320885.1| predicted protein [Populus trichocarpa] gi|222861658|gb|EEE99200.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  180 bits (457), Expect = 4e-43
 Identities = 105/239 (43%), Positives = 145/239 (60%), Gaps = 10/239 (4%)
 Frame = +3

Query: 66  SMETLSTSVSTLKLHGIPSTTPRELNLFKPPNPTHLLPPHSHLYNKLNPISNRPTSPFSN 245
           +M+T+S+S+STLK     ST P EL   + P+ +H LPP+         ++ +PTS  SN
Sbjct: 40  AMDTISSSISTLKGPAFLSTLP-ELQHLRTPHVSHQLPPN---------LTTKPTSSISN 89

Query: 246 KA----------SFAYPFHSTTPTSSLKAKSPIVHTKATSGYAAALVDIARCNDALHIVE 395
           +           +   P  S    SS    SP  H    SGYAAALVDIARC  +L IV+
Sbjct: 90  RTPSKTKTLSFKNLNLPLFSNISQSSSHNSSPHSHRNPVSGYAAALVDIARCKSSLDIVQ 149

Query: 396 KDVKXXXXXXXXXXXXAILVDPFVNDNMKGQVVKELLEKGRFQKHLVVVLKMLVEKNKVG 575
            DV+            A+L  PFV D  KGQVVKE+ ++G+F ++LV ++KML+++NKV 
Sbjct: 150 NDVQKLLKLLQNEQIQAVLGSPFVGDKEKGQVVKEVAKRGKFNRYLVGLVKMLIDRNKVM 209

Query: 576 MISGVLEEFKRIYDDLNGTQVVLVSSSKKMQEDQLFGIVKKVQKMSGATKVKVRNLINE 752
           ++S VL EF+ I D+L+GT+VVLV S KKM+EDQLF I K VQ ++GA  VKV+N  +E
Sbjct: 210 IVSDVLMEFESICDELSGTRVVLVPSPKKMEEDQLFWIAKTVQNLTGAMNVKVKNFFDE 268


>gb|AFK44768.1| unknown [Lotus japonicus]
          Length = 240

 Score =  172 bits (436), Expect = 1e-40
 Identities = 98/233 (42%), Positives = 140/233 (60%), Gaps = 5/233 (2%)
 Frame = +3

Query: 69  METLSTSVS-TLKLHGIPSTTPRELNLFKPPNPTHLLPPHSHLYNKL---NPISNRPTSP 236
           M+ L+TSVS TLK+   P T        + P      PP  H+ +     N I    T  
Sbjct: 1   MDPLTTSVSSTLKISPFPPTNREFYYFTRTPYAPPTRPPQHHVSSAPTVHNLIPKIKTLS 60

Query: 237 FSNKASFAYPFHSTTPTSSLKAKSPIV-HTKATSGYAAALVDIARCNDALHIVEKDVKXX 413
               +S   P  S TP   +K   PI+ H    +GYAAA++D+A+  ++LH V++DV+  
Sbjct: 61  HHKSSSSLAPSSSNTPPPKIKPSPPIIFHRNPATGYAAAVIDVAQSTNSLHSVQRDVQRL 120

Query: 414 XXXXXXXXXXAILVDPFVNDNMKGQVVKELLEKGRFQKHLVVVLKMLVEKNKVGMISGVL 593
                     + + DP   + ++ Q +K +LEKG F +H+V +LKML++KNK+G++  VL
Sbjct: 121 LKLLQTVNFESFVADPSRIEEVRRQALKRVLEKGNFHRHVVTILKMLLKKNKLGIVQQVL 180

Query: 594 EEFKRIYDDLNGTQVVLVSSSKKMQEDQLFGIVKKVQKMSGATKVKVRNLINE 752
           +EF+RIYD+L GTQVVLVSS KKM ED+L GIVK VQ+MSGA +VKV+NL+ E
Sbjct: 181 QEFERIYDELCGTQVVLVSSEKKMGEDELLGIVKSVQQMSGAVRVKVKNLVPE 233


>ref|NP_001235001.1| uncharacterized protein LOC100526851 [Glycine max]
           gi|255630986|gb|ACU15857.1| unknown [Glycine max]
          Length = 218

 Score =  156 bits (394), Expect = 9e-36
 Identities = 97/230 (42%), Positives = 133/230 (57%), Gaps = 2/230 (0%)
 Frame = +3

Query: 69  METLSTSVSTLKLHGIPSTT--PRELNLFKPPNPTHLLPPHSHLYNKLNPISNRPTSPFS 242
           M+TLS+SVSTL +  +PS+T   R+   FK            H+++   P     T  FS
Sbjct: 1   MDTLSSSVSTLNVPPLPSSTFTNRDFYRFKASPTRSQQQQQHHVFSTSTPNFLPKTKTFS 60

Query: 243 NKASFAYPFHSTTPTSSLKAKSPIVHTKATSGYAAALVDIARCNDALHIVEKDVKXXXXX 422
           +K+S + PF S +P    K  SP  H    +GYAAALVD+A  +++LH V  DV+     
Sbjct: 61  HKSSPSLPF-SPSPLKP-KPSSPTFHPNPATGYAAALVDVAHNSNSLHFVHSDVQRLLKL 118

Query: 423 XXXXXXXAILVDPFVNDNMKGQVVKELLEKGRFQKHLVVVLKMLVEKNKVGMISGVLEEF 602
                  +  V                 E+G F +H+V +LKML++KNKVG++  VL+EF
Sbjct: 119 LQGAKFQSPAV-----------------EQGNFHRHVVALLKMLLKKNKVGVVKEVLQEF 161

Query: 603 KRIYDDLNGTQVVLVSSSKKMQEDQLFGIVKKVQKMSGATKVKVRNLINE 752
           +RIYD L GTQ+VLVSS  KM+EDQLFGI K V ++SGA +VKVRNL+ E
Sbjct: 162 ERIYDRLCGTQMVLVSSKTKMREDQLFGIAKSVHQLSGAVRVKVRNLVQE 211


>ref|XP_004134294.1| PREDICTED: ATP synthase delta chain, chloroplastic-like [Cucumis
           sativus] gi|449478221|ref|XP_004155254.1| PREDICTED: ATP
           synthase delta chain, chloroplastic-like [Cucumis
           sativus]
          Length = 227

 Score =  150 bits (380), Expect = 4e-34
 Identities = 85/218 (38%), Positives = 131/218 (60%), Gaps = 9/218 (4%)
 Frame = +3

Query: 123 TTPRELNLFKPPNPT--------HLLPPHSHLYNKLNPISNRPTSPFSNKASFAYPFHST 278
           TTP   +  + P+ T        HL  P +HL ++    ++   S   N  S     + +
Sbjct: 5   TTPSVSSALRVPSRTLTSSRDFLHLKNPTAHLPHRSPSRTSNSISKPPNFLSTPQTLNPS 64

Query: 279 TPTSS-LKAKSPIVHTKATSGYAAALVDIARCNDALHIVEKDVKXXXXXXXXXXXXAILV 455
            P S+  ++ SP++H +  SGYAAAL+D ++    +H V KDV              +L 
Sbjct: 65  IPFSTPRRSSSPLLHRRPASGYAAALLDASQSTGTIHSVAKDVGRFSKLLRGKRIGRVLN 124

Query: 456 DPFVNDNMKGQVVKELLEKGRFQKHLVVVLKMLVEKNKVGMISGVLEEFKRIYDDLNGTQ 635
           DP V D  KG++VKE+  KG F++ +V + KML+EK+K+ +++ V  EF+R+YD+L GT+
Sbjct: 125 DPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKSKLSILTEVFSEFERVYDELCGTE 184

Query: 636 VVLVSSSKKMQEDQLFGIVKKVQKMSGATKVKVRNLIN 749
           VV+VSSSKKM+E++L GI K VQ++SGA KVKVR+ I+
Sbjct: 185 VVMVSSSKKMEEEELIGIAKNVQRLSGAIKVKVRSFIH 222


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