BLASTX nr result

ID: Cimicifuga21_contig00019577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019577
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265131.1| PREDICTED: uncharacterized protein LOC100268...   318   1e-84
ref|XP_002528748.1| conserved hypothetical protein [Ricinus comm...   306   8e-81
ref|NP_566649.1| uncharacterized protein [Arabidopsis thaliana] ...   293   4e-77
ref|XP_003524967.1| PREDICTED: uncharacterized protein LOC100792...   292   9e-77
ref|XP_002315057.1| predicted protein [Populus trichocarpa] gi|2...   292   1e-76

>ref|XP_002265131.1| PREDICTED: uncharacterized protein LOC100268166 [Vitis vinifera]
            gi|297743783|emb|CBI36666.3| unnamed protein product
            [Vitis vinifera]
          Length = 320

 Score =  318 bits (816), Expect = 1e-84
 Identities = 174/330 (52%), Positives = 221/330 (66%), Gaps = 4/330 (1%)
 Frame = +3

Query: 90   SSGLNIQSLVSPSCSIQFSYLTKMSLIFTPPSTTSFNPRTNLSILNNTLFHSKKNPSLTL 269
            SS  +I S+V PS +I    L K     +P    +F   T+  I       S+  P +T 
Sbjct: 2    SSVFSISSMV-PSSNISHFKLYKSKCKSSPDPNCAF---THCKI-------SRGIPLITK 50

Query: 270  QVFKSPQLYQSKTLTFTCNSNTNPNSET---KIAFNYDFDEESSNSPWEGAVVYKRDPTV 440
             +    +      L FT   N     E    K  +N + + E + SPWEGAVVYKR+P++
Sbjct: 51   SIHPISRNKPHSALKFTARYNFESFDEENTKKFDWNDEREIEDTGSPWEGAVVYKRNPSI 110

Query: 441  THLEYCTTLERLGFGKLSTEVSKSRASIMGLRVTKAVKDYPSGTPVLISIDVCRKKHKLR 620
             H+E+CTTLERLG GKLSTE+SKSRAS+MGLRVTKA KDYP GTPV ISIDV RKKHKLR
Sbjct: 111  LHVEHCTTLERLGLGKLSTEISKSRASVMGLRVTKAAKDYPQGTPVHISIDVTRKKHKLR 170

Query: 621  LDGIIKTVLSLGCNRCGEPAAECVFSNFTLLLNEEAIEEGDVIDMGVMFGTGKQNGYSSI 800
            LDG+++TV++LGCNRCGEPAAEC+FSNF+LLL EE IEE +VI+MGV+FG   +   S+ 
Sbjct: 171  LDGLLRTVITLGCNRCGEPAAECIFSNFSLLLTEEPIEEQEVINMGVIFGEDDKLKTSTE 230

Query: 801  GEXXXXXXXXXXXXRLYFPAEESEIDISKNIRDLIHVEITINAVCNSGCKGLCLRCGANL 980
                           LYFP EE+EIDISK+IRD++H+EITINAVC+S CKG+CL+CG NL
Sbjct: 231  SSEEDDEASIDLDDWLYFPPEETEIDISKHIRDMVHLEITINAVCDSRCKGICLKCGINL 290

Query: 981  NTSSCRCRKQE-DEKNLGPLGNLKNEMLKK 1067
            NT+SC C K+E  EK  GPLG L+ ++ +K
Sbjct: 291  NTASCNCSKEEVKEKGYGPLGVLRKQIQQK 320


>ref|XP_002528748.1| conserved hypothetical protein [Ricinus communis]
            gi|223531842|gb|EEF33660.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 313

 Score =  306 bits (783), Expect = 8e-81
 Identities = 164/312 (52%), Positives = 215/312 (68%), Gaps = 10/312 (3%)
 Frame = +3

Query: 162  SLIFTPPSTTSFNPRTNLSILNNTLFHSKKNPSLTLQVFKSPQLYQSK-TLTFTCNSNTN 338
            SLIFTP    S     N   ++  ++    + S ++ +F     + S  +++   NS + 
Sbjct: 3    SLIFTPSVAPS--SLGNKQKVHTLVYQKNFSSSPSISIFHYKCSWASMLSVSNKNNSRSI 60

Query: 339  PNSE--TKIAFNYDFDEESS----NSPWEGAVVYKRDPTVTHLEYCTTLERLGFGKLSTE 500
            PN++  T ++  +D  EE +     SPWEGA++YKR+P+V+H+EYCTTLERLG GK+STE
Sbjct: 61   PNNQKFTDVSLGWDDLEEENPEDMESPWEGAIIYKRNPSVSHIEYCTTLERLGLGKVSTE 120

Query: 501  VSKSRASIMGLRVTKAVKDYPSGTPVLISIDVCRKKHKLRLDGIIKTVLSLGCNRCGEPA 680
            VSKSRAS+MGLRVTKAVKD+P GTPV ISIDV RKK KLRLDGIIKTVL+L CNRCG P 
Sbjct: 121  VSKSRASVMGLRVTKAVKDFPLGTPVQISIDVTRKKQKLRLDGIIKTVLTLTCNRCGVPT 180

Query: 681  AECVFSNFTLLLNEEAIEEGDVIDMGVMFGTGKQNGYSSIG--EXXXXXXXXXXXXRLYF 854
            A  ++SNF+LLL+EE IEE +++DMG++FG  K    ++ G  E            R YF
Sbjct: 181  AGSIYSNFSLLLSEEQIEEPEIVDMGMIFGEDKFESSAASGYEEEDDDDASIDWDDRFYF 240

Query: 855  PAEESEIDISKNIRDLIHVEITINAVCNSGCKGLCLRCGANLNTSSCRCRKQED-EKNLG 1031
            P EE EIDISKNIRDL+H+EI  NA+C++ CKG+CL CG NLNTSSC C K+++ EK  G
Sbjct: 241  PPEEKEIDISKNIRDLVHIEIADNAICDASCKGVCLNCGTNLNTSSCSCSKEKNKEKGYG 300

Query: 1032 PLGNLKNEMLKK 1067
            PL +LK +M  K
Sbjct: 301  PLKDLKKQMQPK 312


>ref|NP_566649.1| uncharacterized protein [Arabidopsis thaliana]
            gi|11994192|dbj|BAB01295.1| unnamed protein product
            [Arabidopsis thaliana] gi|21593774|gb|AAM65741.1| unknown
            [Arabidopsis thaliana] gi|109946589|gb|ABG48473.1|
            At3g19810 [Arabidopsis thaliana]
            gi|110742135|dbj|BAE98996.1| hypothetical protein
            [Arabidopsis thaliana] gi|332642771|gb|AEE76292.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 321

 Score =  293 bits (751), Expect = 4e-77
 Identities = 146/271 (53%), Positives = 191/271 (70%), Gaps = 2/271 (0%)
 Frame = +3

Query: 261  LTLQVFKSPQLYQSKTLTFTCNSNTNPNSETKIAFNYDFDEE--SSNSPWEGAVVYKRDP 434
            L  +  K P+L +S+ L     S  +    + I  +++  EE   + SPWEG+V+Y+R+ 
Sbjct: 53   LFTEPIKLPRLAKSRILV----SQESFTETSTIDMDWEDQEEIEDTGSPWEGSVMYRRNA 108

Query: 435  TVTHLEYCTTLERLGFGKLSTEVSKSRASIMGLRVTKAVKDYPSGTPVLISIDVCRKKHK 614
            +VTH+EYCTTLERLG G+LST+VSK RAS MGLRVTK VKDYP GTPV +S+DV RKK K
Sbjct: 109  SVTHVEYCTTLERLGLGRLSTDVSKKRASAMGLRVTKDVKDYPDGTPVQVSVDVIRKKKK 168

Query: 615  LRLDGIIKTVLSLGCNRCGEPAAECVFSNFTLLLNEEAIEEGDVIDMGVMFGTGKQNGYS 794
            LRLDGI++TV++LGCNRCGE   E +FSNF+LLL EE +EE DVID+G  FG  K+ G  
Sbjct: 169  LRLDGIVRTVITLGCNRCGESTGESIFSNFSLLLTEEPVEEPDVIDLGFTFGNDKEEGED 228

Query: 795  SIGEXXXXXXXXXXXXRLYFPAEESEIDISKNIRDLIHVEITINAVCNSGCKGLCLRCGA 974
               +            +L+FP E  EIDISK+IRDL+H+EITI A+C+S CKG+CL+CGA
Sbjct: 229  ---DDDNDDSWIDWEDKLHFPPEVKEIDISKHIRDLVHLEITITAICDSACKGMCLKCGA 285

Query: 975  NLNTSSCRCRKQEDEKNLGPLGNLKNEMLKK 1067
            NLN   C C ++E +K  GPLGNL+ +M +K
Sbjct: 286  NLNKRKCDCGREEKDKGYGPLGNLREQMQQK 316


>ref|XP_003524967.1| PREDICTED: uncharacterized protein LOC100792185 [Glycine max]
          Length = 318

 Score =  292 bits (748), Expect = 9e-77
 Identities = 141/239 (58%), Positives = 179/239 (74%), Gaps = 1/239 (0%)
 Frame = +3

Query: 345  SETKIAFNYDFDEESSNSPWEGAVVYKRDPTVTHLEYCTTLERLGFGKLSTEVSKSRASI 524
            ++  + ++ D + E   SPWEGAV+YKR+ T+ HLEYCTTLERLG  KLS++VSK+RA+ 
Sbjct: 78   NDESLGWDDDEEVEDMGSPWEGAVIYKRNATILHLEYCTTLERLGLAKLSSDVSKTRAAA 137

Query: 525  MGLRVTKAVKDYPSGTPVLISIDVCRKKHKLRLDGIIKTVLSLGCNRCGEPAAECVFSNF 704
            MGLRVTKAVKD+P+GTPV ISIDV RKK KLRLDGIIKTV++L CNRC  P+AE +FS F
Sbjct: 138  MGLRVTKAVKDFPNGTPVQISIDVTRKKKKLRLDGIIKTVITLLCNRCCAPSAESIFSEF 197

Query: 705  TLLLNEEAIEEGDVIDMGVMFGTGKQNGYSSIGEXXXXXXXXXXXXRLYFPAEESEIDIS 884
            +LLL +E IEE + IDMGV+FG  K     + GE            +LYFP ++ +IDIS
Sbjct: 198  SLLLTDEPIEEPETIDMGVIFGEDKLTTSGNSGEDDDDDALIDMDDQLYFPPQQRQIDIS 257

Query: 885  KNIRDLIHVEITINAVCNSGCKGLCLRCGANLNTSSCRCRKQE-DEKNLGPLGNLKNEM 1058
            KNIRD +H+EIT+N+VC  GCKG+CL+CG N NT +C C K+E  EK+ GPLGNLK +M
Sbjct: 258  KNIRDRVHLEITMNSVCGPGCKGMCLKCGQNFNTGNCNCSKEEVQEKSFGPLGNLKEKM 316


>ref|XP_002315057.1| predicted protein [Populus trichocarpa] gi|222864097|gb|EEF01228.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  292 bits (747), Expect = 1e-76
 Identities = 147/260 (56%), Positives = 187/260 (71%), Gaps = 7/260 (2%)
 Frame = +3

Query: 309  LTFTCNSNTNPNSE--TKIAFNYDFDEESS----NSPWEGAVVYKRDPTVTHLEYCTTLE 470
            + FT       NS+  T ++ N+D  EE       SPWEGA++YKR+ +++H+EYCTTLE
Sbjct: 63   IRFTTRHAVYSNSQKFTDVSLNWDDQEEEDAEDMESPWEGAIIYKRNSSISHVEYCTTLE 122

Query: 471  RLGFGKLSTEVSKSRASIMGLRVTKAVKDYPSGTPVLISIDVCRKKHKLRLDGIIKTVLS 650
            RLG GKLSTE+SKSRAS+MGLRVTKAVKDYP GTPV ISIDV +KK +LRLDGIIKTV++
Sbjct: 123  RLGLGKLSTEISKSRASVMGLRVTKAVKDYPLGTPVQISIDVTKKKKRLRLDGIIKTVIT 182

Query: 651  LGCNRCGEPAAECVFSNFTLLLNEEAIEEGDVIDMGVMFGTGKQNGYSSIGEXXXXXXXX 830
            LGC RCGEP AE +FSNF+LLL+EE + E ++I+MG +FG  K    S   E        
Sbjct: 183  LGCYRCGEPVAEGIFSNFSLLLSEEPVAEPEIINMGKVFGNDKLKS-SIFEEEDGDEASI 241

Query: 831  XXXXRLYFPAEESEIDISKNIRDLIHVEITINAVCNSGCKGLCLRCGANLNTSSCRCRKQ 1010
                RL+FP E+ EIDISK +RD++HVEIT++ +C+  CKGLCL CG NLN SSC C K+
Sbjct: 242  EWDDRLHFPPEDKEIDISKPLRDMVHVEITLDVICDPSCKGLCLECGTNLNKSSCNCSKE 301

Query: 1011 -EDEKNLGPLGNLKNEMLKK 1067
             E E+  GPL +LK +ML +
Sbjct: 302  KEKERGPGPLKDLKKQMLSE 321


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