BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019576
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [R...    71   8e-11
ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltrans...    65   4e-09
ref|XP_003606939.1| AdoMet-dependent rRNA methyltransferase spb1...    65   6e-09
ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltrans...    64   1e-08
ref|XP_002440267.1| hypothetical protein SORBIDRAFT_09g028780 [S...    64   1e-08

>ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
           gi|223547931|gb|EEF49423.1| ribosomal RNA
           methyltransferase, putative [Ricinus communis]
          Length = 828

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = +2

Query: 2   ELNEKGDLGDSDSEETH--ALQXXXXXXXXXXXHRRYDEQLEEFLDQAYERFVSRADGSA 175
           E +E G+LGDS++EE H  A +            RRYD  LEEFLDQ YERFV++ +GS 
Sbjct: 421 ENDENGELGDSENEEPHDQADEHTSSDLDSDEERRRYDAHLEEFLDQVYERFVTKREGST 480

Query: 176 KQRKRLKRDYSK 211
           KQRKR K+ YS+
Sbjct: 481 KQRKRAKKAYSE 492


>ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
           [Glycine max]
          Length = 829

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
 Frame = +2

Query: 11  EKGDLGDSDSEETHAL--QXXXXXXXXXXXHRRYDEQLEEFLDQAYERFVSRADGSAKQR 184
           ++G+L DS++EETH                 +RY+EQ+E+ +D+AYERFV R +GSAKQR
Sbjct: 425 DEGELEDSENEETHESPEHSSGDLEDSDEERKRYNEQMEDLMDKAYERFVIRKEGSAKQR 484

Query: 185 KRLKRDYSKDSKELL 229
           KR+K+ Y  D+K+ L
Sbjct: 485 KRIKKSY--DAKDQL 497


>ref|XP_003606939.1| AdoMet-dependent rRNA methyltransferase spb1 [Medicago truncatula]
           gi|355507994|gb|AES89136.1| AdoMet-dependent rRNA
           methyltransferase spb1 [Medicago truncatula]
          Length = 780

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +2

Query: 14  KGDLGDSDSEETHA-LQXXXXXXXXXXXHRRYDEQLEEFLDQAYERFVSRADGSAKQRKR 190
           +G++ DS++EE    L+            RRYDEQ+E+ L+QAYERFV + +G+AKQRKR
Sbjct: 397 EGEVDDSENEENKGGLEHSSSDLDSDEERRRYDEQMEDLLEQAYERFVIKKEGTAKQRKR 456

Query: 191 LKRDYSKDS 217
           +K+ Y  DS
Sbjct: 457 IKKFYDADS 465


>ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
           [Glycine max]
          Length = 834

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
 Frame = +2

Query: 11  EKGDLGDSDSEETHALQXXXXXXXXXXX---HRRYDEQLEEFLDQAYERFVSRADGSAKQ 181
           ++G++ DS++EETH  +               +RY+EQ+E+ +DQAYERFV R +GSAKQ
Sbjct: 426 DEGEVEDSENEETHEGRPEHSSSDLEDSDEERKRYNEQMEDLMDQAYERFVIRKEGSAKQ 485

Query: 182 RKRLKRDYSKDSKEL 226
           RKR+K+ Y   ++ L
Sbjct: 486 RKRIKKSYDAKAQLL 500


>ref|XP_002440267.1| hypothetical protein SORBIDRAFT_09g028780 [Sorghum bicolor]
           gi|241945552|gb|EES18697.1| hypothetical protein
           SORBIDRAFT_09g028780 [Sorghum bicolor]
          Length = 819

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   ELNEKGDLGDSDSEETHALQXXXXXXXXXXXHRRYDEQLEEFLDQAYERFVSRADGSAKQ 181
           ELN + ++GDS++E+T AL+            +RYD QLEE LD+AYERFV++  G  KQ
Sbjct: 420 ELNVEDEIGDSENEDTQALEDSDEEIDSDEEQQRYDAQLEEMLDEAYERFVTKKGGEIKQ 479

Query: 182 -RKRLKR 199
            RKR KR
Sbjct: 480 ERKRAKR 486