BLASTX nr result

ID: Cimicifuga21_contig00019558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019558
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycin...    87   4e-15
emb|CBI30669.3| unnamed protein product [Vitis vinifera]               87   5e-15
ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloro...    87   5e-15
emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera]    87   5e-15
ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro...    86   1e-14

>ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycine max]
           gi|255630327|gb|ACU15520.1| unknown [Glycine max]
          Length = 146

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 50/102 (49%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
 Frame = +2

Query: 251 LLHCXXXXXXXXXXXXXXXXXXXXXXDFSSNGGVTR-KRSGLVVRAGKAALCLTKRNRSR 427
           LLHC                      D +SN G  R K SGLVVRAGKAALCLTKR+RSR
Sbjct: 44  LLHCSFLSSPSHLSSPSSVSGLSLGLDLTSNVGTKRGKGSGLVVRAGKAALCLTKRSRSR 103

Query: 428 KSLAXXXXXXXXXXXXXXXAILKRRRAKGRKILCTKSYPSSG 553
           KSLA               A+L+RRRAKGR++LCTK++P+SG
Sbjct: 104 KSLARTHGFRKRMSTPGGRAVLRRRRAKGRRVLCTKTHPNSG 145


>emb|CBI30669.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 48/76 (63%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = +2

Query: 329 DFSSNGGVTRKRS-GLVVRAGKAALCLTKRNRSRKSLAXXXXXXXXXXXXXXXAILKRRR 505
           D +S+ GV ++R  GLVVRAGKAALC TKRNRSRKSLA               A+LKRRR
Sbjct: 35  DLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRR 94

Query: 506 AKGRKILCTKSYPSSG 553
           AKGRK+LCTKS PSSG
Sbjct: 95  AKGRKVLCTKSNPSSG 110


>ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Vitis
           vinifera]
          Length = 148

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 48/76 (63%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = +2

Query: 329 DFSSNGGVTRKRS-GLVVRAGKAALCLTKRNRSRKSLAXXXXXXXXXXXXXXXAILKRRR 505
           D +S+ GV ++R  GLVVRAGKAALC TKRNRSRKSLA               A+LKRRR
Sbjct: 70  DLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRR 129

Query: 506 AKGRKILCTKSYPSSG 553
           AKGRK+LCTKS PSSG
Sbjct: 130 AKGRKVLCTKSNPSSG 145


>emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera]
          Length = 148

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 48/76 (63%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = +2

Query: 329 DFSSNGGVTRKRS-GLVVRAGKAALCLTKRNRSRKSLAXXXXXXXXXXXXXXXAILKRRR 505
           D +S+ GV ++R  GLVVRAGKAALC TKRNRSRKSLA               A+LKRRR
Sbjct: 70  DLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRR 129

Query: 506 AKGRKILCTKSYPSSG 553
           AKGRK+LCTKS PSSG
Sbjct: 130 AKGRKVLCTKSNPSSG 145


>ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis
           sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S
           ribosomal protein L34, chloroplastic-like [Cucumis
           sativus]
          Length = 155

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 49/76 (64%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = +2

Query: 329 DFSSNGGVTR-KRSGLVVRAGKAALCLTKRNRSRKSLAXXXXXXXXXXXXXXXAILKRRR 505
           D+SS  GV + K  GLVVRAGKAALC TKRNRSRKSLA               A+LKRRR
Sbjct: 77  DWSSKVGVGQGKGRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRR 136

Query: 506 AKGRKILCTKSYPSSG 553
           AKGRK+LCTKS PSSG
Sbjct: 137 AKGRKVLCTKSNPSSG 152


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