BLASTX nr result
ID: Cimicifuga21_contig00019558
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00019558 (736 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycin... 87 4e-15 emb|CBI30669.3| unnamed protein product [Vitis vinifera] 87 5e-15 ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloro... 87 5e-15 emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera] 87 5e-15 ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro... 86 1e-14 >ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycine max] gi|255630327|gb|ACU15520.1| unknown [Glycine max] Length = 146 Score = 87.0 bits (214), Expect = 4e-15 Identities = 50/102 (49%), Positives = 59/102 (57%), Gaps = 1/102 (0%) Frame = +2 Query: 251 LLHCXXXXXXXXXXXXXXXXXXXXXXDFSSNGGVTR-KRSGLVVRAGKAALCLTKRNRSR 427 LLHC D +SN G R K SGLVVRAGKAALCLTKR+RSR Sbjct: 44 LLHCSFLSSPSHLSSPSSVSGLSLGLDLTSNVGTKRGKGSGLVVRAGKAALCLTKRSRSR 103 Query: 428 KSLAXXXXXXXXXXXXXXXAILKRRRAKGRKILCTKSYPSSG 553 KSLA A+L+RRRAKGR++LCTK++P+SG Sbjct: 104 KSLARTHGFRKRMSTPGGRAVLRRRRAKGRRVLCTKTHPNSG 145 >emb|CBI30669.3| unnamed protein product [Vitis vinifera] Length = 113 Score = 86.7 bits (213), Expect = 5e-15 Identities = 48/76 (63%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Frame = +2 Query: 329 DFSSNGGVTRKRS-GLVVRAGKAALCLTKRNRSRKSLAXXXXXXXXXXXXXXXAILKRRR 505 D +S+ GV ++R GLVVRAGKAALC TKRNRSRKSLA A+LKRRR Sbjct: 35 DLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRR 94 Query: 506 AKGRKILCTKSYPSSG 553 AKGRK+LCTKS PSSG Sbjct: 95 AKGRKVLCTKSNPSSG 110 >ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Vitis vinifera] Length = 148 Score = 86.7 bits (213), Expect = 5e-15 Identities = 48/76 (63%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Frame = +2 Query: 329 DFSSNGGVTRKRS-GLVVRAGKAALCLTKRNRSRKSLAXXXXXXXXXXXXXXXAILKRRR 505 D +S+ GV ++R GLVVRAGKAALC TKRNRSRKSLA A+LKRRR Sbjct: 70 DLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRR 129 Query: 506 AKGRKILCTKSYPSSG 553 AKGRK+LCTKS PSSG Sbjct: 130 AKGRKVLCTKSNPSSG 145 >emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera] Length = 148 Score = 86.7 bits (213), Expect = 5e-15 Identities = 48/76 (63%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Frame = +2 Query: 329 DFSSNGGVTRKRS-GLVVRAGKAALCLTKRNRSRKSLAXXXXXXXXXXXXXXXAILKRRR 505 D +S+ GV ++R GLVVRAGKAALC TKRNRSRKSLA A+LKRRR Sbjct: 70 DLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRR 129 Query: 506 AKGRKILCTKSYPSSG 553 AKGRK+LCTKS PSSG Sbjct: 130 AKGRKVLCTKSNPSSG 145 >ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis sativus] Length = 155 Score = 85.5 bits (210), Expect = 1e-14 Identities = 49/76 (64%), Positives = 53/76 (69%), Gaps = 1/76 (1%) Frame = +2 Query: 329 DFSSNGGVTR-KRSGLVVRAGKAALCLTKRNRSRKSLAXXXXXXXXXXXXXXXAILKRRR 505 D+SS GV + K GLVVRAGKAALC TKRNRSRKSLA A+LKRRR Sbjct: 77 DWSSKVGVGQGKGRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRR 136 Query: 506 AKGRKILCTKSYPSSG 553 AKGRK+LCTKS PSSG Sbjct: 137 AKGRKVLCTKSNPSSG 152