BLASTX nr result

ID: Cimicifuga21_contig00019533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019533
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40552.2| hypothetical protein SDM1_4t00014 [Solanum demissum]    79   3e-13
ref|XP_002284918.1| PREDICTED: probable exonuclease V-like [Viti...    76   3e-12
emb|CAN60322.1| hypothetical protein VITISV_002856 [Vitis vinifera]    75   4e-12
ref|XP_002526352.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
emb|CBI16271.3| unnamed protein product [Vitis vinifera]               60   1e-07

>gb|AAT40552.2| hypothetical protein SDM1_4t00014 [Solanum demissum]
          Length = 399

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/70 (62%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
 Frame = +1

Query: 217 FQGNARSIQSITFHSKRRLSSCSQGEK--VKDIEDLGDLGNTQKKNRKINSLLHRFRRKR 390
           FQ N RSIQSIT  SKR LSSCS      V D+ED G L ++QK+NR + SLL R+RRKR
Sbjct: 65  FQNNVRSIQSITLLSKRSLSSCSSQSDSLVVDVEDSGRLMSSQKRNRVVASLLSRYRRKR 124

Query: 391 GLSVTDIVAT 420
           GL+VTDI AT
Sbjct: 125 GLAVTDITAT 134


>ref|XP_002284918.1| PREDICTED: probable exonuclease V-like [Vitis vinifera]
          Length = 442

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/69 (60%), Positives = 47/69 (68%)
 Frame = +1

Query: 214 LFQGNARSIQSITFHSKRRLSSCSQGEKVKDIEDLGDLGNTQKKNRKINSLLHRFRRKRG 393
           L   NARSI SI   SKRRLS C+    ++DIED G L +TQKK     SLLHRFRRK+G
Sbjct: 101 LLHRNARSIGSIARLSKRRLSDCTDTSPIRDIEDSGVLRSTQKKIGVRESLLHRFRRKKG 160

Query: 394 LSVTDIVAT 420
           LSVTDI  T
Sbjct: 161 LSVTDITGT 169


>emb|CAN60322.1| hypothetical protein VITISV_002856 [Vitis vinifera]
          Length = 402

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/69 (60%), Positives = 47/69 (68%)
 Frame = +1

Query: 214 LFQGNARSIQSITFHSKRRLSSCSQGEKVKDIEDLGDLGNTQKKNRKINSLLHRFRRKRG 393
           L   NARSI SI   SKRRLS C+    ++DIED G L +TQKK     SLLHRFRRK+G
Sbjct: 61  LLHRNARSIGSIARLSKRRLSXCTDTSPIRDIEDSGVLRSTQKKIGVRESLLHRFRRKKG 120

Query: 394 LSVTDIVAT 420
           LSVTDI  T
Sbjct: 121 LSVTDITGT 129


>ref|XP_002526352.1| conserved hypothetical protein [Ricinus communis]
           gi|223534311|gb|EEF36023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 412

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
 Frame = +1

Query: 211 TLFQGNARSIQSITFHSKRRLSSCSQGEKVKDIEDLGDLGNTQKKNRKI--NSLLHRFRR 384
           +LFQ + RSIQ+IT  SK+RL          DIEDLGD  +TQ K  ++   S L++FR+
Sbjct: 65  SLFQNSVRSIQTITSFSKKRLIG-------SDIEDLGDFKSTQLKKNRVADQSFLYKFRK 117

Query: 385 KRGLSVTDIVAT 420
           + GLSVTDI +T
Sbjct: 118 RTGLSVTDITST 129


>emb|CBI16271.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/59 (54%), Positives = 38/59 (64%)
 Frame = +1

Query: 244 SITFHSKRRLSSCSQGEKVKDIEDLGDLGNTQKKNRKINSLLHRFRRKRGLSVTDIVAT 420
           S T  +   LS C+    ++DIED G L +TQKK     SLLHRFRRK+GLSVTDI  T
Sbjct: 48  SFTAAASSSLSDCTDTSPIRDIEDSGVLRSTQKKIGVRESLLHRFRRKKGLSVTDITGT 106


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