BLASTX nr result

ID: Cimicifuga21_contig00019508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019508
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235671.1| NBS-LRR type disease resistance protein [Gly...   131   1e-28
ref|XP_002337346.1| nbs-lrr resistance protein [Populus trichoca...   130   2e-28
ref|XP_002303451.1| nbs-lrr resistance protein [Populus trichoca...   128   6e-28
ref|XP_002265617.2| PREDICTED: disease resistance protein RPM1-l...   127   1e-27
ref|XP_002326566.1| nbs-lrr resistance protein [Populus trichoca...   127   2e-27

>ref|NP_001235671.1| NBS-LRR type disease resistance protein [Glycine max]
           gi|223452621|gb|ACM89637.1| NBS-LRR type disease
           resistance protein [Glycine max]
          Length = 934

 Score =  131 bits (329), Expect = 1e-28
 Identities = 85/200 (42%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
 Frame = -3

Query: 591 EWDQVYQTLGSIMNGSESSQLGLADFYFVISLSYNDLPYHLKSCFLYLCIFPEDSPIQCS 412
           EW  VY++ GS + G++     L D   V+SLS+N+LPY+LKSC LYL IFPE   I+  
Sbjct: 375 EWQMVYRSFGSEIEGNDK----LEDMKKVLSLSFNELPYYLKSCLLYLSIFPEFHAIEHM 430

Query: 411 KLFRLWAAEGFVERGPGVDLTLEEIASFYLDELIQRSLVQVEYMDERKKVKSCTIHDLVR 232
           +L RLW AEGFV    G   TLEE+A  YL EL+ RSL+QV       ++K+C +HDL+R
Sbjct: 431 RLIRLWIAEGFVNGEDG--KTLEEVADSYLKELLDRSLLQVVAKTSDGRMKTCRMHDLLR 488

Query: 231 KFLIQKARDQNFAAAIIAKNXXXXXXXXXXXXXXXXXSISAVRVHCTLN----NRSVLHL 64
           + +  K++DQNFA   IAK+                  +  + +  TLN    NR+   L
Sbjct: 489 EIVNLKSKDQNFAT--IAKD----------QDIIWPDKVRRLSIINTLNNVQQNRTTFQL 536

Query: 63  RSLLFFESSYGLDNKFFSFR 4
           RSLL F SS  L++  FS R
Sbjct: 537 RSLLMFASSDSLEH--FSIR 554


>ref|XP_002337346.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838881|gb|EEE77232.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 460

 Score =  130 bits (326), Expect = 2e-28
 Identities = 80/186 (43%), Positives = 110/186 (59%), Gaps = 4/186 (2%)
 Frame = -3

Query: 591 EWDQVYQTLGSIMNGSESSQLGLADFYFVISLSYNDLPYHLKSCFLYLCIFPEDSPIQCS 412
           EW+ V ++LG+ +  +      L +   V+SLS+NDLPY+LKSCFLY+ IFPED  I+ +
Sbjct: 159 EWEMVRRSLGAEIEDNNK----LLNLKKVLSLSFNDLPYYLKSCFLYVSIFPEDHLIEHT 214

Query: 411 KLFRLWAAEGFVERGPGVDLTLEEIASFYLDELIQRSLVQVEYMDERKKVKSCTIHDLVR 232
           KL RLW AEGFVE   G +  LE++A  Y +EL+ RSL+QV       +VK+C  HDL+R
Sbjct: 215 KLIRLWVAEGFVEAKYGKE--LEDVAEDYFNELLNRSLLQVAETASDGRVKTCRPHDLLR 272

Query: 231 KFLIQKARDQNFAAAIIAKNXXXXXXXXXXXXXXXXXSISAVRVHCTLN----NRSVLHL 64
           + +I K+RDQNF  A+IAK+                  I  + +H T+     NR V  L
Sbjct: 273 EIIISKSRDQNF--AVIAKD----------QNAMWPDKIRRLSIHYTVRNVQLNRCVSQL 320

Query: 63  RSLLFF 46
           RSL  F
Sbjct: 321 RSLFMF 326


>ref|XP_002303451.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|105923008|gb|ABF81450.1| NBS-LRR type disease
           resistance protein [Populus trichocarpa]
           gi|222840883|gb|EEE78430.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 946

 Score =  128 bits (322), Expect = 6e-28
 Identities = 69/134 (51%), Positives = 94/134 (70%)
 Frame = -3

Query: 591 EWDQVYQTLGSIMNGSESSQLGLADFYFVISLSYNDLPYHLKSCFLYLCIFPEDSPIQCS 412
           EW+ V+++LG+    +++    L     ++SLSYNDLPY+LKSC LY  IFP  +PI+  
Sbjct: 388 EWEMVHRSLGAGFENNDT----LMSTRKILSLSYNDLPYYLKSCLLYFSIFPAGNPIERM 443

Query: 411 KLFRLWAAEGFVERGPGVDLTLEEIASFYLDELIQRSLVQVEYMDERKKVKSCTIHDLVR 232
           KL RLW AEGFVE G  V +TLEE+A  YL+ELI+RSLV+V       +VK+C IHDL+R
Sbjct: 444 KLIRLWIAEGFVE-GKEV-MTLEEVAEDYLNELIKRSLVRVVEATSDGRVKTCRIHDLLR 501

Query: 231 KFLIQKARDQNFAA 190
           + +I KA+DQ+F A
Sbjct: 502 EIMITKAKDQDFVA 515


>ref|XP_002265617.2| PREDICTED: disease resistance protein RPM1-like [Vitis vinifera]
           gi|147771833|emb|CAN60254.1| hypothetical protein
           VITISV_025805 [Vitis vinifera]
          Length = 934

 Score =  127 bits (319), Expect = 1e-27
 Identities = 66/136 (48%), Positives = 89/136 (65%)
 Frame = -3

Query: 591 EWDQVYQTLGSIMNGSESSQLGLADFYFVISLSYNDLPYHLKSCFLYLCIFPEDSPIQCS 412
           EW      LGS +  +   Q        ++SLSY+DLPY+LKSCFLYL IFPED  I+C+
Sbjct: 390 EWKNFSDNLGSELESNSRLQ----PINTILSLSYHDLPYYLKSCFLYLAIFPEDYTIKCT 445

Query: 411 KLFRLWAAEGFVERGPGVDLTLEEIASFYLDELIQRSLVQVEYMDERKKVKSCTIHDLVR 232
           KL RLW AEGFV+   GV  T+EE+A  +L ELI RSLVQV  +D   K++SC IHDL+R
Sbjct: 446 KLTRLWIAEGFVKAKKGV--TMEELAEEFLTELINRSLVQVSDVDLEGKIRSCHIHDLMR 503

Query: 231 KFLIQKARDQNFAAAI 184
           + +++ A + +F   +
Sbjct: 504 EMILKMAEEMSFCRVL 519


>ref|XP_002326566.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833888|gb|EEE72365.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 916

 Score =  127 bits (318), Expect = 2e-27
 Identities = 69/140 (49%), Positives = 96/140 (68%)
 Frame = -3

Query: 591 EWDQVYQTLGSIMNGSESSQLGLADFYFVISLSYNDLPYHLKSCFLYLCIFPEDSPIQCS 412
           EW+ V ++LG+ +  +      L +   V+SLS+NDLPY+LKSCFLY+ IFPED  I+ +
Sbjct: 388 EWEMVRRSLGAEIEDNNK----LLNLKKVLSLSFNDLPYYLKSCFLYVSIFPEDHLIEHT 443

Query: 411 KLFRLWAAEGFVERGPGVDLTLEEIASFYLDELIQRSLVQVEYMDERKKVKSCTIHDLVR 232
           KL RLW AEGFVE   G +  LE++A  Y +EL+ RSL+QV       +VK+C  HDL+R
Sbjct: 444 KLIRLWVAEGFVEAKYGKE--LEDVAEDYFNELLNRSLLQVAETASDGRVKTCRPHDLLR 501

Query: 231 KFLIQKARDQNFAAAIIAKN 172
           + +I K+RDQNF  A+IAK+
Sbjct: 502 EIIISKSRDQNF--AVIAKD 519


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