BLASTX nr result

ID: Cimicifuga21_contig00019496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019496
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
           mitochondrial-like [Glycine max]
          Length = 1064

 Score = 57.4 bits (137), Expect(2) = 2e-06
 Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 8/81 (9%)
 Frame = -1

Query: 344 AFVILQACLKFR----YRCMYCLLIHSFSSLGNMGRAIEVWY**QVRVG----YPFDNFA 189
           A  +LQ C++ R        +CL++H  SS G MGRAIEV    ++  G    YPFD+F 
Sbjct: 105 ALSVLQRCVRDRGVLPSSSTFCLVVHKLSSKGLMGRAIEVL---ELMAGDGVRYPFDDF- 160

Query: 188 IVFSSLIFEFCKIGKPKRALG 126
            V SS+I  FC+IGKP+ ALG
Sbjct: 161 -VCSSVISGFCRIGKPELALG 180



 Score = 20.8 bits (42), Expect(2) = 2e-06
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 397 IWDSLIERLCSPAK 356
           +WDSLI+ L  P K
Sbjct: 91  MWDSLIQGLHDPEK 104


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