BLASTX nr result

ID: Cimicifuga21_contig00019494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019494
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation...   277   8e-73
ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation...   275   3e-72
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...   275   4e-72
ref|XP_002531589.1| Eukaryotic translation initiation factor 3 s...   273   2e-71
emb|CBI29961.3| unnamed protein product [Vitis vinifera]              268   4e-70

>ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Glycine max]
          Length = 926

 Score =  277 bits (708), Expect = 8e-73
 Identities = 138/176 (78%), Positives = 150/176 (85%)
 Frame = -2

Query: 529 KGTGRVEQVEQLTFLTKVAKTPAQKLEILFNVISAQFDVNSSLHGHMPVNAWKKSVQNML 350
           KGTGR EQVEQLTFLTKVAKTPAQKLEILF+V+SAQFDVN  L+GHMP+N WKK VQNML
Sbjct: 266 KGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVQNML 325

Query: 349 IILDILEQYPNIXXXXXXXXXXXETRKGTDHMGRIRVWGNLAAFFERIGVEFFKSLQCID 170
           IILDIL QYPNI           ET+KG +H G IRVWGNL AF ERI VEFFKSLQCID
Sbjct: 326 IILDILVQYPNIMVDDSVEPDENETQKGAEHNGTIRVWGNLVAFLERIDVEFFKSLQCID 385

Query: 169 PHTREYVERLQDELTFFVLAQNIQDYLERNGDFKAASKVALRRVELVYYKPQEVYD 2
           PHTR+YVERL+DE TF VLAQN+Q+YLER G+FKAASKVALRRVEL+YYKPQEVYD
Sbjct: 386 PHTRDYVERLRDEPTFLVLAQNVQEYLERVGNFKAASKVALRRVELIYYKPQEVYD 441


>ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Glycine max]
          Length = 925

 Score =  275 bits (703), Expect = 3e-72
 Identities = 137/176 (77%), Positives = 150/176 (85%)
 Frame = -2

Query: 529 KGTGRVEQVEQLTFLTKVAKTPAQKLEILFNVISAQFDVNSSLHGHMPVNAWKKSVQNML 350
           KGTGR EQVEQLTFLTKVAKTPAQKLEILF+V+SAQFDVN  L+GH+P+N WKK VQNML
Sbjct: 265 KGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLNGHVPINVWKKCVQNML 324

Query: 349 IILDILEQYPNIXXXXXXXXXXXETRKGTDHMGRIRVWGNLAAFFERIGVEFFKSLQCID 170
           IILDIL QYPNI           ET+KG +H G IRVWGNL AF ERI VEFFKSLQCID
Sbjct: 325 IILDILVQYPNIVADDLVEPDENETQKGPEHNGTIRVWGNLVAFLERIDVEFFKSLQCID 384

Query: 169 PHTREYVERLQDELTFFVLAQNIQDYLERNGDFKAASKVALRRVELVYYKPQEVYD 2
           PHTR+YVERL+DE TF VLAQN+Q+YLER G+FKAASKVALRRVEL+YYKPQEVYD
Sbjct: 385 PHTRDYVERLRDEPTFLVLAQNVQEYLERVGNFKAASKVALRRVELIYYKPQEVYD 440


>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Vitis vinifera]
          Length = 946

 Score =  275 bits (702), Expect = 4e-72
 Identities = 137/176 (77%), Positives = 149/176 (84%)
 Frame = -2

Query: 529 KGTGRVEQVEQLTFLTKVAKTPAQKLEILFNVISAQFDVNSSLHGHMPVNAWKKSVQNML 350
           KGTGR+EQVEQLTFLT+VAKTPAQKLEILF+V+SAQFDVN SL GHMP+N WKK VQNML
Sbjct: 271 KGTGRIEQVEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNML 330

Query: 349 IILDILEQYPNIXXXXXXXXXXXETRKGTDHMGRIRVWGNLAAFFERIGVEFFKSLQCID 170
           +ILDIL Q+ NI           ET+KG D+ G IRVWGNL AF ERI VEFFKSLQCID
Sbjct: 331 VILDILVQHSNILVDDVVEPEENETQKGADYKGTIRVWGNLVAFLERIDVEFFKSLQCID 390

Query: 169 PHTREYVERLQDELTFFVLAQNIQDYLERNGDFKAASKVALRRVELVYYKPQEVYD 2
           PHTREYVERL+DE  F VLAQN+QDYLER GDFKAASKVALRRVEL+YYKPQEVYD
Sbjct: 391 PHTREYVERLRDEPLFLVLAQNVQDYLERVGDFKAASKVALRRVELIYYKPQEVYD 446


>ref|XP_002531589.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223528785|gb|EEF30792.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 619

 Score =  273 bits (697), Expect = 2e-71
 Identities = 136/176 (77%), Positives = 146/176 (82%)
 Frame = -2

Query: 529 KGTGRVEQVEQLTFLTKVAKTPAQKLEILFNVISAQFDVNSSLHGHMPVNAWKKSVQNML 350
           KGTGR EQVEQLTFLTKVAKTPAQKLEILF+V+SAQFDVN  L GHMP+N WKK VQNML
Sbjct: 265 KGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLSGHMPINVWKKCVQNML 324

Query: 349 IILDILEQYPNIXXXXXXXXXXXETRKGTDHMGRIRVWGNLAAFFERIGVEFFKSLQCID 170
           +ILDIL QYPNI           E++KG D+ G IRVWGNL AF ERI  EFFKSLQCID
Sbjct: 325 VILDILVQYPNIVVDDMVEPDENESQKGVDYNGTIRVWGNLVAFLERIDTEFFKSLQCID 384

Query: 169 PHTREYVERLQDELTFFVLAQNIQDYLERNGDFKAASKVALRRVELVYYKPQEVYD 2
           PHTREYVERLQDE  F  LAQN+Q+YLER GDFKAASKVALRRVEL+YYKPQEVYD
Sbjct: 385 PHTREYVERLQDEPMFLALAQNVQEYLERVGDFKAASKVALRRVELIYYKPQEVYD 440


>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  268 bits (685), Expect = 4e-70
 Identities = 134/173 (77%), Positives = 146/173 (84%)
 Frame = -2

Query: 529 KGTGRVEQVEQLTFLTKVAKTPAQKLEILFNVISAQFDVNSSLHGHMPVNAWKKSVQNML 350
           KGTGR+EQVEQLTFLT+VAKTPAQKLEILF+V+SAQFDVN SL GHMP+N WKK VQNML
Sbjct: 240 KGTGRIEQVEQLTFLTRVAKTPAQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNML 299

Query: 349 IILDILEQYPNIXXXXXXXXXXXETRKGTDHMGRIRVWGNLAAFFERIGVEFFKSLQCID 170
           +ILDIL Q+ NI           ET+KG D+ G IRVWGNL AF ERI VEFFKSLQCID
Sbjct: 300 VILDILVQHSNILVDDVVEPEENETQKGADYKGTIRVWGNLVAFLERIDVEFFKSLQCID 359

Query: 169 PHTREYVERLQDELTFFVLAQNIQDYLERNGDFKAASKVALRRVELVYYKPQE 11
           PHTREYVERL+DE  F VLAQN+QDYLER GDFKAASKVALRRVEL+YYKPQE
Sbjct: 360 PHTREYVERLRDEPLFLVLAQNVQDYLERVGDFKAASKVALRRVELIYYKPQE 412


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