BLASTX nr result

ID: Cimicifuga21_contig00019483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019483
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34486.3| unnamed protein product [Vitis vinifera]              309   7e-82
ref|XP_002509968.1| conserved hypothetical protein [Ricinus comm...   292   9e-77
ref|XP_002269576.2| PREDICTED: uncharacterized protein LOC100263...   268   2e-69
ref|XP_002299473.1| predicted protein [Populus trichocarpa] gi|2...   264   3e-68
ref|XP_002869757.1| hypothetical protein ARALYDRAFT_492476 [Arab...   263   5e-68

>emb|CBI34486.3| unnamed protein product [Vitis vinifera]
          Length = 1479

 Score =  309 bits (792), Expect = 7e-82
 Identities = 153/244 (62%), Positives = 186/244 (76%), Gaps = 2/244 (0%)
 Frame = +1

Query: 220  LQKVRIIFMDDGIGNVKVFPDHFEASTPTGDSLQEQNSPLPQTSIDYSLRSHSRFWARRK 399
            L +V++ FMDDG+G ++VFPDHF AS P  +S++++N     +  D S  SHSR WARRK
Sbjct: 1225 LLEVKVNFMDDGLGKIEVFPDHFHASMPIAESVEKKNQSFSHSRTDNSFSSHSRSWARRK 1284

Query: 400  LLGAASMLNLFSVPGLPWGSSNA-QEKVELTALEIESLRSEIADLEEREAHMKARLEHID 576
            L  AASMLNLFS+ GLPWGSS+  QEKVELT  E+ESLR+E+A LEEREAH KA+LEH+D
Sbjct: 1285 LRSAASMLNLFSLRGLPWGSSSDDQEKVELTVAELESLRTELASLEEREAHFKAQLEHVD 1344

Query: 577  EILRSARLTGYLYIRTRWTALPGE-PPIDDTEVDDWLPRFVVLNGSCIFFYXXXXXXXXX 753
            EILRSARL+GYLYIRTRW ALPGE PPIDDTEVDDWLPRFVVL+GSC+FFY         
Sbjct: 1345 EILRSARLSGYLYIRTRWAALPGEPPPIDDTEVDDWLPRFVVLHGSCLFFYMLSTDLSPQ 1404

Query: 754  XXXXXXXVVEVCPLPSFVQEDGQPRYLFHILTRYGLRFECWSSSQIQVDSWLKALTVDCK 933
                   V EV PLP+  +ED + RY F+ILT +GLR+EC S S++QVDSWL AL +DCK
Sbjct: 1405 DSTLLSDVTEVGPLPNLTREDKEIRYCFYILTSHGLRYECSSVSKVQVDSWLTALRLDCK 1464

Query: 934  LGPD 945
            + P+
Sbjct: 1465 IEPE 1468


>ref|XP_002509968.1| conserved hypothetical protein [Ricinus communis]
           gi|223549867|gb|EEF51355.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score =  292 bits (748), Expect = 9e-77
 Identities = 148/242 (61%), Positives = 176/242 (72%), Gaps = 1/242 (0%)
 Frame = +1

Query: 244 MDDGIGNVKVFPDHFEASTPTGDSLQEQNSPLPQTSIDYSLRSHSRFWARRKLLGAASML 423
           MDDG+G +K+ PDHF+ ST + D+ Q       Q  I+   RS SRFWA RKL  AA ML
Sbjct: 1   MDDGLGKIKIVPDHFQVSTSSEDTPQRNTLSNLQPRIENLPRSRSRFWAGRKLKSAALML 60

Query: 424 NLFSVPGLPWGSSNAQEKVELTALEIESLRSEIADLEEREAHMKARLEHIDEILRSARLT 603
           NLFS+ G PWGS+N QEKVELT  E+ESLRSE+AD+EEREAH+KA+LEH+DEILRSAR +
Sbjct: 61  NLFSLRGFPWGSANGQEKVELTVAELESLRSELADIEEREAHLKAQLEHVDEILRSARFS 120

Query: 604 GYLYIRTRWTALPGE-PPIDDTEVDDWLPRFVVLNGSCIFFYXXXXXXXXXXXXXXXXVV 780
           GYLYIR+RWTALPGE PPIDDT+VDDWLPRFVVL+G CIFFY                +V
Sbjct: 121 GYLYIRSRWTALPGEPPPIDDTDVDDWLPRFVVLHGPCIFFYLLSTDLSPQDSTLLSDIV 180

Query: 781 EVCPLPSFVQEDGQPRYLFHILTRYGLRFECWSSSQIQVDSWLKALTVDCKLGPDTTASK 960
           EV  LPSF +ED +P Y F+ILTR+GLR+EC S S+IQV SWL AL  + K   DT A+ 
Sbjct: 181 EVGSLPSFTREDDEPWYSFYILTRHGLRYECSSISKIQVGSWLTALQANFKPDSDTKATN 240

Query: 961 SS 966
            S
Sbjct: 241 GS 242


>ref|XP_002269576.2| PREDICTED: uncharacterized protein LOC100263310 [Vitis vinifera]
          Length = 521

 Score =  268 bits (685), Expect = 2e-69
 Identities = 146/254 (57%), Positives = 176/254 (69%), Gaps = 3/254 (1%)
 Frame = +1

Query: 220 LQKVRIIFMDDGIGNVKVFPDHFEASTPTGDSLQEQNSPLPQTSIDYSLRSHSRFWARRK 399
           L +V++ FMDDG+G                              I+YS  SHSR WARRK
Sbjct: 79  LLEVKVNFMDDGLGK-----------------------------IEYS--SHSRSWARRK 107

Query: 400 LLGAASMLNLFSVPGLPWGSSNA-QEKVELTALEIESLRSEIADLEEREAHMKARLEHID 576
           L  AASMLNLFS+ GLPWGSS+  QEKVELT  E+ESLR+E+A LEEREAH KA+LEH+D
Sbjct: 108 LRSAASMLNLFSLRGLPWGSSSDDQEKVELTVAELESLRTELASLEEREAHFKAQLEHVD 167

Query: 577 EILRSARLTGYLYIRTRWTALPGE-PPIDDTEVDDWLPRFVVLNGSCIFFYXXXXXXXXX 753
           EILRSARL+GYLYIRTRW ALPGE PPIDDTEVDDWLPRFVVL+GSC+FFY         
Sbjct: 168 EILRSARLSGYLYIRTRWAALPGEPPPIDDTEVDDWLPRFVVLHGSCLFFYMLSTDLSPQ 227

Query: 754 XXXXXXXVVEVCPLPSFVQEDGQPRYLFHILTRYGLRFECWSSSQIQVDSWLKALTVDCK 933
                  V EV PLP+  +ED + RY F+ILT +GLR+EC S S++QVDSWL AL +DCK
Sbjct: 228 DSTLLSDVTEVGPLPNLTREDKEIRYCFYILTSHGLRYECSSVSKVQVDSWLTALRLDCK 287

Query: 934 LGPD-TTASKSSES 972
           + P+  +AS+++ S
Sbjct: 288 IEPERRSASRAARS 301


>ref|XP_002299473.1| predicted protein [Populus trichocarpa] gi|222846731|gb|EEE84278.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  264 bits (675), Expect = 3e-68
 Identities = 139/237 (58%), Positives = 167/237 (70%), Gaps = 2/237 (0%)
 Frame = +1

Query: 244 MDDGIGNVKVFPDHFEASTPTGDSLQEQNSPLPQTSIDYSLRSHSRFWARRKLLGAASML 423
           MDD  G + + PDHF  ST + D+ Q   S + Q  ID S  S+SRFW+ RKL  AA ML
Sbjct: 1   MDDIPGRLNIVPDHFHVSTSSEDTPQNITSSIQQPRIDNSSSSNSRFWSGRKLRSAAFML 60

Query: 424 NLFSVPGLPWGSS-NAQEKVELTALEIESLRSEIADLEEREAHMKARLEHIDEILRSARL 600
           NLF++  L WGSS + QEKVEL+  E+ESLRSE+A LEEREA +KA+LEH+DE+LRSAR 
Sbjct: 61  NLFNLQRLSWGSSADVQEKVELSVTELESLRSELAYLEEREALLKAQLEHVDEVLRSARF 120

Query: 601 TGYLYIRTRWTALPGE-PPIDDTEVDDWLPRFVVLNGSCIFFYXXXXXXXXXXXXXXXXV 777
           +GYLYIRTRWTALPGE PP+DDT+VDDWLPRFVVLNG CIFFY                +
Sbjct: 121 SGYLYIRTRWTALPGEPPPLDDTDVDDWLPRFVVLNGPCIFFYLLSTDFSPQDSTLLADI 180

Query: 778 VEVCPLPSFVQEDGQPRYLFHILTRYGLRFECWSSSQIQVDSWLKALTVDCKLGPDT 948
           VEV  LPSF +E  +  Y  +ILTR GLR+EC S S++QVDSWLK L  D KL  +T
Sbjct: 181 VEVGSLPSFTREHEETLYSSYILTRQGLRYECSSVSEVQVDSWLKVLQTDIKLVSET 237


>ref|XP_002869757.1| hypothetical protein ARALYDRAFT_492476 [Arabidopsis lyrata subsp.
           lyrata] gi|297315593|gb|EFH46016.1| hypothetical protein
           ARALYDRAFT_492476 [Arabidopsis lyrata subsp. lyrata]
          Length = 247

 Score =  263 bits (673), Expect = 5e-68
 Identities = 138/247 (55%), Positives = 170/247 (68%), Gaps = 2/247 (0%)
 Frame = +1

Query: 244 MDDGIGN-VKVFPDHFEASTPTGDSLQEQNSPLPQTSIDYSLRSHSRFWARRKLLGAASM 420
           MDDG    + + PDHF A + T +S Q+      QT  D SLRS S+   RR L  AA+M
Sbjct: 1   MDDGTPKKLNILPDHFSAPSSTAESSQDDTPSFSQTKDDISLRSRSQSRTRRNLKRAATM 60

Query: 421 LNLFSVPGLPWGSSNAQEKVELTALEIESLRSEIADLEEREAHMKARLEHIDEILRSARL 600
           LNLF++  LPW  S+ QEKVEL+A E+ESLRSE++DLEEREA++KA+LEH+DE+LRSARL
Sbjct: 61  LNLFTLRRLPW-VSDGQEKVELSAAELESLRSELSDLEEREAYLKAQLEHVDEVLRSARL 119

Query: 601 TGYLYIRTRWTALPGE-PPIDDTEVDDWLPRFVVLNGSCIFFYXXXXXXXXXXXXXXXXV 777
           +GYL+IR+RW ALPGE PPIDDTEVDDWLPRFVVL G C+FFY                +
Sbjct: 120 SGYLFIRSRWAALPGEPPPIDDTEVDDWLPRFVVLQGPCLFFYLLSTDLSPQDSTLLADI 179

Query: 778 VEVCPLPSFVQEDGQPRYLFHILTRYGLRFECWSSSQIQVDSWLKALTVDCKLGPDTTAS 957
           VEV  LPS+ +E  +  Y F+ILTR GLRFEC S+S+ QVDSWL  L +DCK  P+   S
Sbjct: 180 VEVGSLPSYTREFDETHYCFYILTRQGLRFECSSTSKTQVDSWLSVLRLDCKSEPEERLS 239

Query: 958 KSSES*P 978
             S   P
Sbjct: 240 NGSSEAP 246


Top