BLASTX nr result

ID: Cimicifuga21_contig00019450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019450
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34394.1| Mutator transposable element-related protein, put...   110   2e-22
emb|CAN65999.1| hypothetical protein VITISV_007696 [Vitis vinifera]   109   4e-22
emb|CAD40681.2| OSJNBb0118P14.3 [Oryza sativa Japonica Group]         105   6e-21
gb|ABA97240.1| transposon protein, putative, Mutator sub-class [...   103   3e-20
ref|XP_002437561.1| hypothetical protein SORBIDRAFT_10g029405 [S...   103   3e-20

>gb|ABI34394.1| Mutator transposable element-related protein, putative [Solanum
           tuberosum]
          Length = 616

 Score =  110 bits (276), Expect = 2e-22
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
 Frame = -1

Query: 666 HAHNSPNLKKKNRG---LGNLAWGASRCYKQREFKRIMEELKKTNLGAHDYLMGEDPKLW 496
           H HN  N K+   G   L    W A++    +EF   M  +++ +  A D+L  ++P  W
Sbjct: 59  HLHN--NFKRAGFGGFTLKKAFWAAAKATTVKEFDACMVRIRELDPNAVDWLNDKEPSQW 116

Query: 495 ARSYFDHITCSDHNTNNFSEAFNAWIMEARDKPIVKLVGKVQSLMTNLMFERNQLSNDWD 316
           +RS+       D   NN  E FN+ I +ARDKPIV L+ K++ L+   M    + ++ W 
Sbjct: 117 SRSHLSSDAKCDILLNNICEVFNSMIFDARDKPIVTLLEKLRYLLMARMLANREKAHKWS 176

Query: 315 DDTLVPRVVKDINKKKEMVRDYTLSGASQNTWQVNHR--HGAWWIIELEKRTCTCMEWQV 142
            + + P++   ++K +    +Y    ++Q  +++     H + W ++LE R C+C +W +
Sbjct: 177 SNDVCPKIKDILHKNQTAAGEYIPRKSNQRKYEIIGATIHDS-WAVDLENRICSCTKWSI 235

Query: 141 SGIPCIHAVCVIHHKRGN 88
            GIPC HA+  I  K+ N
Sbjct: 236 MGIPCKHAIAAIRAKKDN 253


>emb|CAN65999.1| hypothetical protein VITISV_007696 [Vitis vinifera]
          Length = 632

 Score =  109 bits (273), Expect = 4e-22
 Identities = 60/188 (31%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
 Frame = -1

Query: 660 HNSPNLKKK--NRGLGNLAWGASRCYKQREFKRIMEELKKTNLGAHDYLMGEDPKLWARS 487
           H   N KK    + L +  W A+R   +  F   M+ELKK ++ A+++L+  D + W+R 
Sbjct: 404 HLHXNFKKDFPXKVLKDAMWSAARATTKNSFDFHMDELKKLDVKAYEWLVKLDVRTWSRH 463

Query: 486 YFDHITCSDHNTNNFSEAFNAWIMEARDKPIVKLVGKVQ-SLMTNLMFERNQLSNDWDDD 310
            F+  + SD   NN +E+FNAWI+EA DKP++ ++  ++  LM  L  +R+ +     + 
Sbjct: 464 AFNPRSKSDTLVNNIAESFNAWILEAXDKPVLTMMEIIRVMLMQRLQTKRDHMRR--YEG 521

Query: 309 TLVPRVVKDINKKKEMVRDYTLSGASQNTWQVNHRHGAWWIIELEKRTCTCMEWQVSGIP 130
            + PR+ K + + K  V         ++ ++V + +G  ++++L +RTC C  W +SGIP
Sbjct: 522 RVCPRIYKKLERIKXEVGHCISRWNGESKYEVEYIYGGRYVVDLNERTCGCGRWGLSGIP 581

Query: 129 CIHAVCVI 106
           C HA   I
Sbjct: 582 CFHAAAAI 589


>emb|CAD40681.2| OSJNBb0118P14.3 [Oryza sativa Japonica Group]
          Length = 939

 Score =  105 bits (263), Expect = 6e-21
 Identities = 56/192 (29%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
 Frame = -1

Query: 666  HAHNSPNLKKKNRGLGNLAWGASRCYKQREFKRIMEELKKTNLGAHDYLMGEDPKLWARS 487
            H + +  +  K   L N  W  +R     E+   ME++K  +  A+ YL    P  W R+
Sbjct: 538  HLYQNFQVLHKGETLKNQLWAIARSSTVPEWNANMEKMKALSSEAYKYLEEIPPNQWCRA 597

Query: 486  YFDHITCSDHNTNNFSEAFNAWIMEARDKPIVKLVGKVQS-LMTNLMFERNQLSNDWDDD 310
            +F      D   NN SE FN +I++AR+ PI+ ++ ++++ +M  L  ++ +L  +W   
Sbjct: 598  FFSDFPKCDILLNNNSEVFNKYILDAREMPILSMLERIRNQIMNRLYTKQKELERNWPCG 657

Query: 309  TLVPRVVKDINKKKEMVRDYTLSGASQNTWQVNHRHGAWWIIELEKRTCTCMEWQVSGIP 130
             + P++ + + K  EM     +  A    +QV+   G+ +I+EL  + C C  WQ++GIP
Sbjct: 658  -ICPKIKRKVEKNTEMANTCYVFPAGMGAFQVSD-IGSQYIVELNVKRCDCRRWQLTGIP 715

Query: 129  CIHAVCVIHHKR 94
            C HA+  + H+R
Sbjct: 716  CNHAISCLRHER 727


>gb|ABA97240.1| transposon protein, putative, Mutator sub-class [Oryza sativa
            Japonica Group]
          Length = 1078

 Score =  103 bits (257), Expect = 3e-20
 Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 1/194 (0%)
 Frame = -1

Query: 666  HAHNSPNLKKKNRGLGNLAWGASRCYKQREFKRIMEELKKTNLGAHDYLMGEDPKLWARS 487
            H +++  +  K   L N  W  +R     E+   MEE+   N  AHD+L   +P  W R+
Sbjct: 673  HLYSNFQVHFKGENLKNQLWACARSSSVIEWVANMEEMATLNQDAHDWLKKMEPSTWVRA 732

Query: 486  YFDHITCSDHNTNNFSEAFNAWIMEARDKPIVKLVGKV-QSLMTNLMFERNQLSNDWDDD 310
            YF      D   NN  E FN +I+EAR+ P++ ++ K+ Q LMT    ++ + +  W   
Sbjct: 733  YFSDFPKCDILLNNSCEVFNKYILEARELPMLSMLEKIKQQLMTRHFNKQKEAAEQW-KG 791

Query: 309  TLVPRVVKDINKKKEMVRDYTLSGASQNTWQVNHRHGAWWIIELEKRTCTCMEWQVSGIP 130
             + P++ K + K  ++        A +  ++V  R+   +I+++  + C C  W ++GIP
Sbjct: 792  PICPKIRKKVLKNTDLANTCYALPAGKGIFEVQDRNFK-YIVDINAKHCDCRRWDLTGIP 850

Query: 129  CIHAVCVIHHKRGN 88
            C HA+  + ++R N
Sbjct: 851  CSHAISSLRYQRIN 864


>ref|XP_002437561.1| hypothetical protein SORBIDRAFT_10g029405 [Sorghum bicolor]
           gi|241915784|gb|EER88928.1| hypothetical protein
           SORBIDRAFT_10g029405 [Sorghum bicolor]
          Length = 684

 Score =  103 bits (257), Expect = 3e-20
 Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
 Frame = -1

Query: 636 KNRGLGNLAWGASRCYKQREFKRIMEELKKTNLGAHDYLMGEDPKLWARSYFDHITCSDH 457
           K   L N  W  +R      + + ME++K  N  A+ +L    P  W R++F      D 
Sbjct: 348 KGENLKNQLWTCARASTVTRWNQEMEKMKVLNKDAYAWLEKMPPNTWVRAFFSEYPKCDI 407

Query: 456 NTNNFSEAFNAWIMEARDKPIVKLVGKVQS-LMTNLMFERNQLSNDWDDDTLVPRVVKDI 280
             NN  E FN +I+EAR+ PI+ ++ K++S LM+    ++ +L++ W +  + P++ K +
Sbjct: 408 LLNNTCEVFNKYILEARELPILSMLQKIKSQLMSRHYSKQKELADKWGEMVICPKIRKKL 467

Query: 279 NKKKEMVRDYTLSGASQNTWQVNHRHGAW-WIIELEKRTCTCMEWQVSGIPCIHAVCVIH 103
            +  EM     +  +    ++V  R   W +I++L+ R C C  W ++GIPC HA+  + 
Sbjct: 468 ARHAEMSNTCYVLPSGNGIFEVQDRE--WQYIVDLKGRHCECRRWDLTGIPCSHAISCLR 525

Query: 102 HKR 94
           H+R
Sbjct: 526 HER 528


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