BLASTX nr result

ID: Cimicifuga21_contig00019444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019444
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space...   158   6e-37
ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|1...   157   1e-36
ref|NP_680211.1| Cox19-like CHCH family protein [Arabidopsis tha...   153   3e-35
ref|XP_003627292.1| Mitochondrial intermembrane space import and...   150   2e-34
ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space...   149   3e-34

>ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40 [Vitis vinifera] gi|147853097|emb|CAN78563.1|
           hypothetical protein VITISV_010402 [Vitis vinifera]
           gi|297742718|emb|CBI35352.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  158 bits (400), Expect = 6e-37
 Identities = 85/148 (57%), Positives = 96/148 (64%)
 Frame = -1

Query: 566 MGQAQSEASSPVDQTNPESSVKQQEGDAQPGSMEALIAEATAFGDSEGESHDAKAQKALE 387
           MGQ +S  SS  + +    S           S++ALIAEA AFGD E ES DAKAQKALE
Sbjct: 1   MGQVESNQSSAPNNSQSRPS----------DSLDALIAEAAAFGDDENESLDAKAQKALE 50

Query: 386 CPCIAGLRNGPCGTQFSEAFLCFLKSTAEEKGSDCVNPFVALQNCIKTNPDAFSXXXXXX 207
           CPCIA LR+GPCGTQFSEAF+CFLKS+AEEKGSDCV+PFVALQNCIK NP+AFS      
Sbjct: 51  CPCIAHLRSGPCGTQFSEAFVCFLKSSAEEKGSDCVHPFVALQNCIKANPNAFSKDILDD 110

Query: 206 XXXXXXXXXXXXXXKIIPPTWSKEPAAK 123
                         KIIPP W+ E   K
Sbjct: 111 DDEVKKEEEPTQEYKIIPPIWAAEKGPK 138


>ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|118481972|gb|ABK92917.1|
           unknown [Populus trichocarpa]
           gi|222865469|gb|EEF02600.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  157 bits (398), Expect = 1e-36
 Identities = 90/154 (58%), Positives = 101/154 (65%), Gaps = 5/154 (3%)
 Frame = -1

Query: 566 MGQAQSEA--SSPVDQTNPESSVKQQEGDAQPGSMEALIAEATAFGDSEGESHDAKAQKA 393
           MGQAQSE   S   DQ  P  S           SME+L+AEA A+G+ E ES +AKAQKA
Sbjct: 1   MGQAQSEVAPSDTADQMEPHFSSSP--------SMESLLAEAVAYGNDENESLEAKAQKA 52

Query: 392 LECPCIAGLRNGPCGTQFSEAFLCFLKSTAEEKGSDCVNPFVALQNCIKTNPDAFSXXXX 213
           LECPCIA LRNGPCG QFSE+FLCFLKST+EEKGSDCV+PFVALQNCIK NP+AFS    
Sbjct: 53  LECPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKANPNAFS-KDI 111

Query: 212 XXXXXXXXXXXXXXXXKIIPPTWSKE---PAAKL 120
                           KIIPP WS+E   P +KL
Sbjct: 112 LEEAEEKKEEEPAQEYKIIPPIWSRESQSPKSKL 145


>ref|NP_680211.1| Cox19-like CHCH family protein [Arabidopsis thaliana]
           gi|26450246|dbj|BAC42240.1| unknown protein [Arabidopsis
           thaliana] gi|28827550|gb|AAO50619.1| unknown protein
           [Arabidopsis thaliana] gi|332005776|gb|AED93159.1|
           Cox19-like CHCH family protein [Arabidopsis thaliana]
          Length = 162

 Score =  153 bits (386), Expect = 3e-35
 Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 9/154 (5%)
 Frame = -1

Query: 566 MGQAQSEASS-PVDQTN----PESSVKQQEGDAQPGSMEALIAEATAFG--DSEGESHDA 408
           MGQAQS+ +S P   T     P ++  +   D    SM++L+AEA A+G  D+E ES +A
Sbjct: 1   MGQAQSDENSIPTTTTTNTPPPSANSPRDSEDTSSPSMDSLLAEAAAYGEDDNENESLEA 60

Query: 407 KAQKALECPCIAGLRNGPCGTQFSEAFLCFLKSTAEEKGSDCVNPFVALQNCIKTNPDAF 228
           KAQ+AL+CPCIA LRNG CG+QFSEAFLCFLKSTAEEKGSDCVNPFVALQ+CI  NPDAF
Sbjct: 61  KAQRALDCPCIADLRNGSCGSQFSEAFLCFLKSTAEEKGSDCVNPFVALQSCINANPDAF 120

Query: 227 --SXXXXXXXXXXXXXXXXXXXXKIIPPTWSKEP 132
             S                    +IIPP W+K+P
Sbjct: 121 SKSVTGDEKETEKKEEQPPVQDHRIIPPLWAKDP 154


>ref|XP_003627292.1| Mitochondrial intermembrane space import and assembly protein
           [Medicago truncatula] gi|66947630|emb|CAJ00011.1|
           coiled-coil-helix-coiled-coil-helix domain containing
           protein [Medicago truncatula]
           gi|355521314|gb|AET01768.1| Mitochondrial intermembrane
           space import and assembly protein [Medicago truncatula]
          Length = 150

 Score =  150 bits (378), Expect = 2e-34
 Identities = 77/144 (53%), Positives = 94/144 (65%)
 Frame = -1

Query: 566 MGQAQSEASSPVDQTNPESSVKQQEGDAQPGSMEALIAEATAFGDSEGESHDAKAQKALE 387
           MGQA+S  + P   T   ++V      +   S+E++IAEA A+G    E+ +  AQKALE
Sbjct: 1   MGQAESAEAQPQTTTTTTTAVVSNSSSSDSTSLESVIAEAAAYGSQNTENVEEMAQKALE 60

Query: 386 CPCIAGLRNGPCGTQFSEAFLCFLKSTAEEKGSDCVNPFVALQNCIKTNPDAFSXXXXXX 207
           CPCIA LR+GPCG QFSEAFLCFLKST+EEKGSDCVNPF+ALQ+CIK NP+AFS      
Sbjct: 61  CPCIADLRSGPCGFQFSEAFLCFLKSTSEEKGSDCVNPFIALQSCIKANPNAFS--KDIL 118

Query: 206 XXXXXXXXXXXXXXKIIPPTWSKE 135
                         KI+PP WSKE
Sbjct: 119 GEDESKESEQVQEYKILPPDWSKE 142


>ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  149 bits (377), Expect = 3e-34
 Identities = 80/152 (52%), Positives = 96/152 (63%), Gaps = 7/152 (4%)
 Frame = -1

Query: 566 MGQAQSEASSPVDQTNPESSVKQQEGDAQPGSMEALIAEATAFGDSEGESHDAKAQKALE 387
           MGQA+S A+       P S  +     + P SME+LIAEA A+G+   ES DAKA +ALE
Sbjct: 1   MGQAESVAAVSPPNDLPPSLNQSASPVSGPPSMESLIAEAEAYGNETNESLDAKANRALE 60

Query: 386 CPCIAGLRNGPCGTQFSEAFLCFLKSTAEEKGSDCVNPFVALQNCIKTNPDAFS------ 225
           CPCIA LR GPCG QFS+AFLCF KSTAEEKGSDCV+PFVALQ+CIK NP+AFS      
Sbjct: 61  CPCIADLRKGPCGIQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDE 120

Query: 224 -XXXXXXXXXXXXXXXXXXXXKIIPPTWSKEP 132
                                ++IPP+WS+EP
Sbjct: 121 DEEEKEMEKEKVKTEEPTQDYRVIPPSWSREP 152


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