BLASTX nr result

ID: Cimicifuga21_contig00019440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019440
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]    61   9e-14
emb|CAN66751.1| hypothetical protein VITISV_018060 [Vitis vinifera]    55   8e-12
emb|CAN63971.1| hypothetical protein VITISV_004149 [Vitis vinifera]    53   8e-12
emb|CAN77201.1| hypothetical protein VITISV_002545 [Vitis vinifera]    55   2e-11
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]                72   4e-11

>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
          Length = 839

 Score = 60.8 bits (146), Expect(2) = 9e-14
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +3

Query: 135 PGSKTLGYKWIFKKKLKPDGSIDKYKARLVVK*FR 239
           PG+K LG KWIFKKK+KPDG+IDKYKARLV K F+
Sbjct: 518 PGNKHLGCKWIFKKKMKPDGTIDKYKARLVAKGFK 552



 Score = 40.4 bits (93), Expect(2) = 9e-14
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = +1

Query: 67  RKAINSETQSILQNHTWELVDLP 135
           ++AINSE +SI+ NHTW+LVDLP
Sbjct: 495 KEAINSEIESIMHNHTWKLVDLP 517


>emb|CAN66751.1| hypothetical protein VITISV_018060 [Vitis vinifera]
          Length = 577

 Score = 55.5 bits (132), Expect(2) = 8e-12
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +3

Query: 141 SKTLGYKWIFKKKLKPDGSIDKYKARLVVK*FR 239
           +KT+GYKWIFK+KLK DGSI+KYKA LV K F+
Sbjct: 247 AKTIGYKWIFKRKLKQDGSIEKYKAHLVAKGFK 279



 Score = 39.3 bits (90), Expect(2) = 8e-12
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +1

Query: 70  KAINSETQSILQNHTWELVDLP 135
           +AINSE +SI+ NHTW+LVDLP
Sbjct: 223 EAINSEIESIMYNHTWKLVDLP 244


>emb|CAN63971.1| hypothetical protein VITISV_004149 [Vitis vinifera]
          Length = 570

 Score = 52.8 bits (125), Expect(2) = 8e-12
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +3

Query: 135 PGSKTLGYKWIFKKKLKPDGSIDKYKARLVVK*FR 239
           P +KT+G  WIFK+KLK D SI+KYKARLVVK F+
Sbjct: 288 PHAKTIGCNWIFKRKLKQDXSIEKYKARLVVKGFK 322



 Score = 42.0 bits (97), Expect(2) = 8e-12
 Identities = 18/27 (66%), Positives = 21/27 (77%)
 Frame = +1

Query: 55  LFNRRKAINSETQSILQNHTWELVDLP 135
           + N   AINSE +SI+ NHTWELVDLP
Sbjct: 261 MMNAMLAINSEIESIMYNHTWELVDLP 287


>emb|CAN77201.1| hypothetical protein VITISV_002545 [Vitis vinifera]
          Length = 515

 Score = 55.5 bits (132), Expect(2) = 2e-11
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +3

Query: 135 PGSKTLGYKWIFKKKLKPDGSIDKYKARLVVK*FR 239
           PG+KT+G KWIFK+KLK DGSI+KY+A LV K F+
Sbjct: 103 PGAKTVGCKWIFKRKLKQDGSIEKYRAHLVAKGFK 137



 Score = 38.1 bits (87), Expect(2) = 2e-11
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +1

Query: 61  NRRKAINSETQSILQNHTWELVDLP 135
           N   AIN+E +SI+ +HTWELVDLP
Sbjct: 78  NAMLAINNEIESIMYSHTWELVDLP 102


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/79 (49%), Positives = 52/79 (65%)
 Frame = +3

Query: 3    MIEDGPQTFKVDMSSSEAL**KEGYK**DSIYLAKSHLGTSGSSPGSKTLGYKWIFKKKL 182
            ++E+ P TFK  MSSSE++  KE         L+      +   PG+K+LG KWIFK+K+
Sbjct: 783  LLENEPPTFKATMSSSESIYWKEAVNSEIESILSNHTWELADLPPGNKSLGSKWIFKRKM 842

Query: 183  KPDGSIDKYKARLVVK*FR 239
            K DG+IDKYKARLVVK +R
Sbjct: 843  KVDGTIDKYKARLVVKGYR 861


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