BLASTX nr result
ID: Cimicifuga21_contig00019430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00019430
(1876 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi... 705 0.0
ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|2... 697 0.0
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,... 653 0.0
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi... 643 0.0
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ... 614 e-173
>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product
[Vitis vinifera]
Length = 533
Score = 705 bits (1819), Expect = 0.0
Identities = 342/516 (66%), Positives = 413/516 (80%)
Frame = -3
Query: 1799 ISQFISNHPTLLMLEKNCTSMTDLHKLHANLIKTGLIKDHIAASRILSFCATSPFGNINY 1620
IS+FIS+HP L +LEK+CT+M DL K+HA+L+KTGL K +A S +L+FCATSP G+INY
Sbjct: 17 ISKFISDHPHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINY 76
Query: 1619 AYLVFSQIQNPNLFIWNTIIRGFSQSSTPHVAISLFLDMLQSSDVQPQRLTYPSLFKAYA 1440
AYLVF+QI +PNLF WNTIIRGFSQSSTPH AISLF+DML S VQP RLTYPS+FKAYA
Sbjct: 77 AYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYA 136
Query: 1439 QLGLAHHGVQLHGRIIKLGLESDPFVRNTIIFMYTNCGYLNEANRLFDENTNLDVVAWNS 1260
QLGLAH+G QLHGR+IKLGL+ DPF+RNTII+MY NCG+L+E + F E + D+VAWNS
Sbjct: 137 QLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNS 196
Query: 1259 MIMGLAKSGLVDDSRRLFDKMPSKTTISWNSMTGGYVRNGRFREAFDLFRGMQSEGIKPS 1080
MIMGLAK G VD+SR+LFD+MP + T+SWNSM GYVRNGR REA DLF MQ E IKPS
Sbjct: 197 MIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPS 256
Query: 1079 EFTMVSLLTACARLGALEQGKWIHAYINKNKIELNTIVLTAIIDMYCKCGCIKEAFQVFT 900
EFTMVSLL A ARLGAL+QG+WIH YI KN ELN IV +IIDMYCKCG I EAFQVF
Sbjct: 257 EFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFE 316
Query: 899 AASKKGLSCWNSMILGLAINGQSEEAIRLFSKLQSSGLKLSDVSFIGALSACTHSGMVDE 720
A KGLS WN+MILGLA+NG EAI+LFS+L+ S L+ DV+F+G L+AC +SG+VD+
Sbjct: 317 MAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDK 376
Query: 719 AKYYFSLMKEKYMIEPTIKHYGCMVDVXXXXXXXXXXXEMITKMPIKPDAIIWGSLLSAC 540
AK YFSLM + Y IEP+IKHY CMVD E+I MP+ PDAIIW SLLSAC
Sbjct: 377 AKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSAC 436
Query: 539 REHGNIEIGERAAKRLTELDPSDSGSYILLSNAYASSGRYEEAMNARRLMKEREIRKEPG 360
R+HGN+E+ +RAAK + +LD +DS Y+LLSN YA+S ++EEAM R MKE++I KEPG
Sbjct: 437 RKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPG 496
Query: 359 CSMIEVDGAVHEFVVGGTLHPQATEIHCLLDDLGLM 252
CS+IEV+G +HEFV GG LHPQA E++ LL++LG+M
Sbjct: 497 CSLIEVNGEIHEFVAGGRLHPQAQEVYSLLNELGMM 532
>ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|222856190|gb|EEE93737.1|
predicted protein [Populus trichocarpa]
Length = 509
Score = 697 bits (1799), Expect = 0.0
Identities = 345/508 (67%), Positives = 408/508 (80%), Gaps = 1/508 (0%)
Frame = -3
Query: 1763 MLEKNCTSMTDLHKLHANLIKTGLIKDHIAASRILSFCATSPFGNINYAYLVFSQIQNPN 1584
ML+KNCTSM DL K+HA LIKTGL KD IAASR+L+FC TSP G+INYAYLVF+QI+NPN
Sbjct: 1 MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFC-TSPAGDINYAYLVFTQIRNPN 59
Query: 1583 LFIWNTIIRGFSQSSTPHVAISLFLDMLQSSDV-QPQRLTYPSLFKAYAQLGLAHHGVQL 1407
LF+WNTIIRGFSQSSTPH AISLF+DM+ +S QPQRLTYPS+FKAYAQLGLAH G QL
Sbjct: 60 LFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQL 119
Query: 1406 HGRIIKLGLESDPFVRNTIIFMYTNCGYLNEANRLFDENTNLDVVAWNSMIMGLAKSGLV 1227
HGR+IKLGLE+D F++NTI+ MY NCG+L EA R+FD T DVV WN+MI+GLAK G +
Sbjct: 120 HGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEI 179
Query: 1226 DDSRRLFDKMPSKTTISWNSMTGGYVRNGRFREAFDLFRGMQSEGIKPSEFTMVSLLTAC 1047
D SRRLFDKM + T+SWNSM GYVR GRF EA +LF MQ EGIKPSEFTMVSLL AC
Sbjct: 180 DKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNAC 239
Query: 1046 ARLGALEQGKWIHAYINKNKIELNTIVLTAIIDMYCKCGCIKEAFQVFTAASKKGLSCWN 867
A LGAL QG+WIH YI KN LN+IV+TAIIDMY KCG I +A QVF +A KKGLSCWN
Sbjct: 240 ACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWN 299
Query: 866 SMILGLAINGQSEEAIRLFSKLQSSGLKLSDVSFIGALSACTHSGMVDEAKYYFSLMKEK 687
S+ILGLA++G+ EA+RLFSKL+SS LK VSFIG L+AC H+GMVD AK YF LM E
Sbjct: 300 SLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSET 359
Query: 686 YMIEPTIKHYGCMVDVXXXXXXXXXXXEMITKMPIKPDAIIWGSLLSACREHGNIEIGER 507
Y IEP+IKHY CMVDV E+I MP+ PDAIIWGSLLS+CRE+GNIE+ ++
Sbjct: 360 YKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQ 419
Query: 506 AAKRLTELDPSDSGSYILLSNAYASSGRYEEAMNARRLMKEREIRKEPGCSMIEVDGAVH 327
AAKR+ ELDP++S S+ILLSN YA+ +EEA+ R +KE+++ KEPGCS+IEV+G VH
Sbjct: 420 AAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEVH 479
Query: 326 EFVVGGTLHPQATEIHCLLDDLGLMLKE 243
EFV GG LHP++ +I+ LDDLGL LKE
Sbjct: 480 EFVAGGRLHPRSKDIYHALDDLGLTLKE 507
>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 653 bits (1685), Expect = 0.0
Identities = 325/518 (62%), Positives = 402/518 (77%)
Frame = -3
Query: 1799 ISQFISNHPTLLMLEKNCTSMTDLHKLHANLIKTGLIKDHIAASRILSFCATSPFGNINY 1620
IS+ IS+ L ML+KNCT+M DL K+H+ LIKTGL KD AASRIL+FCA SP G+INY
Sbjct: 15 ISKLISDQTYLSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCA-SPAGDINY 73
Query: 1619 AYLVFSQIQNPNLFIWNTIIRGFSQSSTPHVAISLFLDMLQSSDVQPQRLTYPSLFKAYA 1440
AYLVF QIQNPN+F WNTIIRGFS+SS P +ISL++DML +S VQPQRLTYPS+FKA+A
Sbjct: 74 AYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFA 133
Query: 1439 QLGLAHHGVQLHGRIIKLGLESDPFVRNTIIFMYTNCGYLNEANRLFDENTNLDVVAWNS 1260
QL LA G QLHG++IKLGLE+D F+RNTI+FMY NCG+ +EA ++FD + D+VAWN+
Sbjct: 134 QLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNT 193
Query: 1259 MIMGLAKSGLVDDSRRLFDKMPSKTTISWNSMTGGYVRNGRFREAFDLFRGMQSEGIKPS 1080
MIMG+AK GLVD+SRRLFDKM + +SWNSM GYVRNGRF +A +LF+ MQ E I+PS
Sbjct: 194 MIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPS 253
Query: 1079 EFTMVSLLTACARLGALEQGKWIHAYINKNKIELNTIVLTAIIDMYCKCGCIKEAFQVFT 900
EFTMVSLL ACA LGA+ QG+WIH Y+ K K ELN IV+TAIIDMY KCG I +A QVF
Sbjct: 254 EFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQ 313
Query: 899 AASKKGLSCWNSMILGLAINGQSEEAIRLFSKLQSSGLKLSDVSFIGALSACTHSGMVDE 720
+A ++GLSCWNSMILGLA+NGQ EA++LFS LQSS L+ DVSFI L+AC H+GMVD+
Sbjct: 314 SAPRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDK 373
Query: 719 AKYYFSLMKEKYMIEPTIKHYGCMVDVXXXXXXXXXXXEMITKMPIKPDAIIWGSLLSAC 540
AK YF LM++KY I+P IKH+ CMVDV E+I M + PDAIIWGSLL +C
Sbjct: 374 AKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSC 433
Query: 539 REHGNIEIGERAAKRLTELDPSDSGSYILLSNAYASSGRYEEAMNARRLMKEREIRKEPG 360
++GNI++ +RAA L EL+PS+S S++L++NAYA++ +EEA+ R +KE I KEPG
Sbjct: 434 CKYGNIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPG 493
Query: 359 CSMIEVDGAVHEFVVGGTLHPQATEIHCLLDDLGLMLK 246
CS IEV G VHEFV GG HP+ EI+ +LD L L K
Sbjct: 494 CSCIEVGGEVHEFVAGGRAHPEIKEIYRVLDVLTLTNK 531
>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 643 bits (1659), Expect = 0.0
Identities = 318/519 (61%), Positives = 401/519 (77%)
Frame = -3
Query: 1799 ISQFISNHPTLLMLEKNCTSMTDLHKLHANLIKTGLIKDHIAASRILSFCATSPFGNINY 1620
I++FIS+ P L ML+ CT+M DL K+HA++IKTGL +AASR+L+FCA+S G+INY
Sbjct: 18 IAKFISDQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSS-GDINY 76
Query: 1619 AYLVFSQIQNPNLFIWNTIIRGFSQSSTPHVAISLFLDMLQSSDVQPQRLTYPSLFKAYA 1440
AYL+F+ I +PNL+ WNTIIRGFS+SSTPH+AISLF+DML SS V PQRLTYPS+FKAYA
Sbjct: 77 AYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSS-VLPQRLTYPSVFKAYA 135
Query: 1439 QLGLAHHGVQLHGRIIKLGLESDPFVRNTIIFMYTNCGYLNEANRLFDENTNLDVVAWNS 1260
QLG + G QLHGR++KLGLE D F++NTII+MY N G L+EA R+FDE +LDVVA NS
Sbjct: 136 QLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNS 195
Query: 1259 MIMGLAKSGLVDDSRRLFDKMPSKTTISWNSMTGGYVRNGRFREAFDLFRGMQSEGIKPS 1080
MIMGLAK G VD SRRLFD MP++T ++WNSM GYVRN R EA +LFR MQ E ++PS
Sbjct: 196 MIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPS 255
Query: 1079 EFTMVSLLTACARLGALEQGKWIHAYINKNKIELNTIVLTAIIDMYCKCGCIKEAFQVFT 900
EFTMVSLL+ACA LGAL+ G+W+H Y+ + ELN IVLTAIIDMYCKCG I +A +VF
Sbjct: 256 EFTMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFE 315
Query: 899 AASKKGLSCWNSMILGLAINGQSEEAIRLFSKLQSSGLKLSDVSFIGALSACTHSGMVDE 720
A+ +GLSCWNS+I+GLA+NG +AI FSKL++S LK VSFIG L+AC + G V +
Sbjct: 316 ASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGK 375
Query: 719 AKYYFSLMKEKYMIEPTIKHYGCMVDVXXXXXXXXXXXEMITKMPIKPDAIIWGSLLSAC 540
A+ YFSLM KY IEP+IKHY CMV+V ++I MP+K D IIWGSLLS+C
Sbjct: 376 ARDYFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSC 435
Query: 539 REHGNIEIGERAAKRLTELDPSDSGSYILLSNAYASSGRYEEAMNARRLMKEREIRKEPG 360
R+HGN+EI +RAA+R+ EL+PSD+ Y+L+SN A+S ++EEAM R LM+ER KEPG
Sbjct: 436 RKHGNVEIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPG 495
Query: 359 CSMIEVDGAVHEFVVGGTLHPQATEIHCLLDDLGLMLKE 243
CS IE+ G VHEF+ GG LHP+A EI+ LL+D L++
Sbjct: 496 CSSIELYGEVHEFLAGGRLHPKAREIYYLLNDSSFALQD 534
>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 542
Score = 614 bits (1584), Expect = e-173
Identities = 305/517 (58%), Positives = 389/517 (75%), Gaps = 5/517 (0%)
Frame = -3
Query: 1799 ISQFISNHPTLLMLEKNCTSMTDLHKLHANLIKTGLIKDHIAASRILSFCATSPFGNINY 1620
IS+FISNHP L ML+ +CT++ H+++ ++IKTGL + IA++R L+FCA SP GNINY
Sbjct: 21 ISKFISNHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCA-SPSGNINY 79
Query: 1619 AYLVFSQIQNPNLFIWNTIIRGFSQSSTPHVAISLFLDMLQSSDVQPQRLTYPSLFKAYA 1440
AY +F ++ NPNL+ WNTIIR FS+SSTP AISLF+DML S +QPQ LTYPS+FKAYA
Sbjct: 80 AYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQ-IQPQYLTYPSVFKAYA 138
Query: 1439 QLGLAHHGVQLHGRIIKLGLESDPFVRNTIIFMYTNCGYLNEANRLFD----ENTNLDVV 1272
QLG AH+G QLHGR++KLGL++D F+ NTII+MY N G ++EA R+FD E + DVV
Sbjct: 139 QLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVV 198
Query: 1271 AWNSMIMGLAKSGLVDDSRRLFDKMPSKTTISWNSMTGGYVRNGRFREAFDLFRGMQSEG 1092
A NSMIMG AK G +D+SR LFD M ++T++SWNSM GYVRNG+ EA +LF MQ EG
Sbjct: 199 AINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEG 258
Query: 1091 IKPSEFTMVSLLTACARLGALEQGKWIHAYINKNKIELNTIVLTAIIDMYCKCGCIKEAF 912
+ SEFTMVSLL ACA LGAL+ GKW+H YI +N ELN IV+TAIIDMYCKCG ++ A
Sbjct: 259 FEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAV 318
Query: 911 QVFTAASKKGLSCWNSMILGLAINGQSEEAIRLFSKLQSSG-LKLSDVSFIGALSACTHS 735
+VF ++GLSCWNS+I+GLA+NG EA FSKL+SS LK VSFIG L+AC H
Sbjct: 319 EVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHL 378
Query: 734 GMVDEAKYYFSLMKEKYMIEPTIKHYGCMVDVXXXXXXXXXXXEMITKMPIKPDAIIWGS 555
G +++A+ YF LM KY IEP+IKHY C+VDV E+I MP+KPDAIIWGS
Sbjct: 379 GAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGS 438
Query: 554 LLSACREHGNIEIGERAAKRLTELDPSDSGSYILLSNAYASSGRYEEAMNARRLMKEREI 375
LLS+CR+H N++I RAA+R+ EL+PSD+ Y+L+SN +A+S ++EEA+ R LMKE
Sbjct: 439 LLSSCRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLT 498
Query: 374 RKEPGCSMIEVDGAVHEFVVGGTLHPQATEIHCLLDD 264
KEPGCS IE+ G VHEF+ GG LHP+ EI+ LL+D
Sbjct: 499 EKEPGCSSIELYGEVHEFIAGGRLHPKTQEIYHLLND 535