BLASTX nr result

ID: Cimicifuga21_contig00019424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019424
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27914.3| unnamed protein product [Vitis vinifera]              218   4e-55
ref|XP_002282186.1| PREDICTED: angio-associated migratory cell p...   218   4e-55
gb|ABS32230.1| transducin family protein [Carica papaya] gi|1645...   218   7e-55
ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
emb|CAN60774.1| hypothetical protein VITISV_007962 [Vitis vinifera]   214   1e-53

>emb|CBI27914.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  218 bits (556), Expect = 4e-55
 Identities = 113/187 (60%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
 Frame = -3

Query: 563 LAFSADGRYLASGSLNGQVQVWDVYSGCQKCTFEGPMK-TEWVRWHPRGHLVLAGSKDDC 387
           L FS DG+ LASGS +G V++WD  SG  KCT EGP    EWVRWHPRGH+VLAGS +DC
Sbjct: 112 LDFSMDGQLLASGSFDGLVKIWDASSGDLKCTLEGPGGGIEWVRWHPRGHVVLAGS-EDC 170

Query: 386 IVGLWDADEYGCQNMYSGHKNGVTCGDFIPDGNAICTGSVDGSLRVWNVIDGKTIHDVRV 207
            V +W+AD     NM+SGH + VTCGDF PDG  ICTGS D +LR+WN   G+ IH VR 
Sbjct: 171 TVWMWNADRGAYLNMFSGHASSVTCGDFTPDGKTICTGSDDATLRIWNPSSGENIHVVRG 230

Query: 206 SPHINSVGLTCLMISSDSALAITGSLDGSVHIVNIRTGKVVSSLTDIGMEWDYIECVELS 27
            P+ ++ GLTCL I+SDS LA+TGS D SVH+VNI TGKVVSSLT      D IEC+ LS
Sbjct: 231 HPY-HTEGLTCLAITSDSTLALTGSKDSSVHVVNITTGKVVSSLTS---HTDSIECIGLS 286

Query: 26  PRLPWAA 6
              PWAA
Sbjct: 287 LSPPWAA 293


>ref|XP_002282186.1| PREDICTED: angio-associated migratory cell protein-like [Vitis
           vinifera]
          Length = 391

 Score =  218 bits (556), Expect = 4e-55
 Identities = 113/187 (60%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
 Frame = -3

Query: 563 LAFSADGRYLASGSLNGQVQVWDVYSGCQKCTFEGPMK-TEWVRWHPRGHLVLAGSKDDC 387
           L FS DG+ LASGS +G V++WD  SG  KCT EGP    EWVRWHPRGH+VLAGS +DC
Sbjct: 110 LDFSMDGQLLASGSFDGLVKIWDASSGDLKCTLEGPGGGIEWVRWHPRGHVVLAGS-EDC 168

Query: 386 IVGLWDADEYGCQNMYSGHKNGVTCGDFIPDGNAICTGSVDGSLRVWNVIDGKTIHDVRV 207
            V +W+AD     NM+SGH + VTCGDF PDG  ICTGS D +LR+WN   G+ IH VR 
Sbjct: 169 TVWMWNADRGAYLNMFSGHASSVTCGDFTPDGKTICTGSDDATLRIWNPSSGENIHVVRG 228

Query: 206 SPHINSVGLTCLMISSDSALAITGSLDGSVHIVNIRTGKVVSSLTDIGMEWDYIECVELS 27
            P+ ++ GLTCL I+SDS LA+TGS D SVH+VNI TGKVVSSLT      D IEC+ LS
Sbjct: 229 HPY-HTEGLTCLAITSDSTLALTGSKDSSVHVVNITTGKVVSSLTS---HTDSIECIGLS 284

Query: 26  PRLPWAA 6
              PWAA
Sbjct: 285 LSPPWAA 291


>gb|ABS32230.1| transducin family protein [Carica papaya]
           gi|164522082|gb|ABY60781.1| transducin family protein
           [Carica papaya]
          Length = 408

 Score =  218 bits (554), Expect = 7e-55
 Identities = 112/182 (61%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
 Frame = -3

Query: 563 LAFSADGRYLASGSLNGQVQVWDVYSGCQKCTFEGPMK-TEWVRWHPRGHLVLAGSKDDC 387
           LAFS DG++LASG L+G VQ+WD  SG  KC  EGP K  EWVRWHPRGHLVLAGS +DC
Sbjct: 109 LAFSTDGQFLASGGLDGLVQIWDASSGNIKCALEGPEKGIEWVRWHPRGHLVLAGS-EDC 167

Query: 386 IVGLWDADEYGCQNMYSGHKNGVTCGDFIPDGNAICTGSVDGSLRVWNVIDGKTIHDVRV 207
            V +W+AD     NM+SGH + VTCGDF PDG  ICTGS D +LR+WN   G+ IH V+ 
Sbjct: 168 TVWMWNADRGAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRIWNPRSGENIHVVKG 227

Query: 206 SPHINSVGLTCLMISSDSALAITGSLDGSVHIVNIRTGKVVSSLTDIGMEWDYIECVELS 27
            P+ ++ GLTCL +SSDS+LA+TGS D SVHIVNI TGKVVSSL       D +ECV  S
Sbjct: 228 HPY-HTEGLTCLAMSSDSSLALTGSKDSSVHIVNIVTGKVVSSLDS---HTDSVECVGFS 283

Query: 26  PR 21
           PR
Sbjct: 284 PR 285


>ref|XP_002326013.1| predicted protein [Populus trichocarpa] gi|222862888|gb|EEF00395.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  216 bits (550), Expect = 2e-54
 Identities = 111/187 (59%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
 Frame = -3

Query: 563 LAFSADGRYLASGSLNGQVQVWDVYSGCQKCTFEGPMK-TEWVRWHPRGHLVLAGSKDDC 387
           LAFS+DG+ LASG  +G VQ+WD  SG  KC  EGP +  EWVRWHP+GHLVLAGS+D  
Sbjct: 109 LAFSSDGQLLASGGFDGLVQIWDASSGNHKCVLEGPDEGIEWVRWHPKGHLVLAGSEDKS 168

Query: 386 IVGLWDADEYGCQNMYSGHKNGVTCGDFIPDGNAICTGSVDGSLRVWNVIDGKTIHDVRV 207
            V +W+AD     N ++GH+  VTCGDF PDG  ICTGS D SLR+WN   G+ IH VR 
Sbjct: 169 -VWMWNADRGAYLNSFTGHEASVTCGDFTPDGKTICTGSDDASLRIWNPKSGENIHVVRG 227

Query: 206 SPHINSVGLTCLMISSDSALAITGSLDGSVHIVNIRTGKVVSSLTDIGMEWDYIECVELS 27
            P+ ++ GLTCL +SSDS LAITGS D SVHIVNI +G+VVSSL       D +ECVEL+
Sbjct: 228 HPY-HTDGLTCLALSSDSTLAITGSKDNSVHIVNITSGRVVSSLAS---HSDSVECVELA 283

Query: 26  PRLPWAA 6
           P  PWAA
Sbjct: 284 PSSPWAA 290


>emb|CAN60774.1| hypothetical protein VITISV_007962 [Vitis vinifera]
          Length = 391

 Score =  214 bits (544), Expect = 1e-53
 Identities = 113/187 (60%), Positives = 132/187 (70%), Gaps = 1/187 (0%)
 Frame = -3

Query: 563 LAFSADGRYLASGSLNGQVQVWDVYSGCQKCTFEGPMK-TEWVRWHPRGHLVLAGSKDDC 387
           L FSADG+ LASGS +G V++WD  SG  K T EGP    EWVRWHPRGHLVLAGS +DC
Sbjct: 110 LDFSADGQLLASGSFDGLVKIWDASSGDLKGTLEGPGGGIEWVRWHPRGHLVLAGS-EDC 168

Query: 386 IVGLWDADEYGCQNMYSGHKNGVTCGDFIPDGNAICTGSVDGSLRVWNVIDGKTIHDVRV 207
            V +W+AD     NM+SGH + VTCG+F PDG  ICTGS D +LR+WN   G+  H VR 
Sbjct: 169 TVWMWNADRSAYLNMFSGHASSVTCGNFTPDGKTICTGSDDATLRIWNPRSGENTHVVRG 228

Query: 206 SPHINSVGLTCLMISSDSALAITGSLDGSVHIVNIRTGKVVSSLTDIGMEWDYIECVELS 27
            P+ ++ GLTCL I+SDS LA+TGS D SVHIVNI TGKVVSSLT      D IEC+ LS
Sbjct: 229 HPY-HTEGLTCLAITSDSTLALTGSKDSSVHIVNIATGKVVSSLTS---HTDSIECIGLS 284

Query: 26  PRLPWAA 6
              PWAA
Sbjct: 285 LSSPWAA 291


Top