BLASTX nr result

ID: Cimicifuga21_contig00019407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019407
         (1863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vin...   400   e-109
emb|CBI38885.3| unnamed protein product [Vitis vinifera]              400   e-109
gb|AFK39131.1| unknown [Lotus japonicus]                              392   e-106
ref|XP_002320713.1| predicted protein [Populus trichocarpa] gi|2...   391   e-106
ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arab...   389   e-105

>ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vinifera]
          Length = 239

 Score =  400 bits (1028), Expect = e-109
 Identities = 206/239 (86%), Positives = 222/239 (92%), Gaps = 3/239 (1%)
 Frame = +3

Query: 108 VMDINLELQESGWEELRKEARKIEGDLDVKLSSYAKLSGRFTQG---DSGSPTVGSSRSW 278
           +MD NL+LQESGWEELRKEARKIEGDLDVKLSSYAKL  RFTQG   D+GSPTV SSRSW
Sbjct: 1   MMDPNLDLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVSSSRSW 60

Query: 279 KSMEMEIESLLEKLQDTNDSMSRCAASATPTTSVSQKLARHRDILHEFIQEFRRIKGNIS 458
           KSMEMEI+SLLEKL DTND+MSRCAASA PTTSV+QKLARHRDILHEF QEFRRIKGN++
Sbjct: 61  KSMEMEIQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNMN 120

Query: 459 SMREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVVQIDDVISQAQTTRSVLG 638
           SMREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGS+  IDDVISQAQTTR+ L 
Sbjct: 121 SMREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSISHIDDVISQAQTTRAALN 180

Query: 639 SQRSMLGDVQGKVKQLSDKFPIIRGLLGAIKRKRSRDTLILAAVIAACTLFLIIYWLSK 815
           SQR++ GD QGKVK LSDKFPIIRGLLG+I+R+RSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 181 SQRTLFGDFQGKVKLLSDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 239


>emb|CBI38885.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  400 bits (1027), Expect = e-109
 Identities = 206/238 (86%), Positives = 221/238 (92%), Gaps = 3/238 (1%)
 Frame = +3

Query: 111 MDINLELQESGWEELRKEARKIEGDLDVKLSSYAKLSGRFTQG---DSGSPTVGSSRSWK 281
           MD NL+LQESGWEELRKEARKIEGDLDVKLSSYAKL  RFTQG   D+GSPTV SSRSWK
Sbjct: 1   MDPNLDLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVSSSRSWK 60

Query: 282 SMEMEIESLLEKLQDTNDSMSRCAASATPTTSVSQKLARHRDILHEFIQEFRRIKGNISS 461
           SMEMEI+SLLEKL DTND+MSRCAASA PTTSV+QKLARHRDILHEF QEFRRIKGN++S
Sbjct: 61  SMEMEIQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNMNS 120

Query: 462 MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVVQIDDVISQAQTTRSVLGS 641
           MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGS+  IDDVISQAQTTR+ L S
Sbjct: 121 MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSISHIDDVISQAQTTRAALNS 180

Query: 642 QRSMLGDVQGKVKQLSDKFPIIRGLLGAIKRKRSRDTLILAAVIAACTLFLIIYWLSK 815
           QR++ GD QGKVK LSDKFPIIRGLLG+I+R+RSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 181 QRTLFGDFQGKVKLLSDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 238


>gb|AFK39131.1| unknown [Lotus japonicus]
          Length = 239

 Score =  392 bits (1007), Expect = e-106
 Identities = 203/237 (85%), Positives = 216/237 (91%), Gaps = 3/237 (1%)
 Frame = +3

Query: 114 DINLELQESGWEELRKEARKIEGDLDVKLSSYAKLSGRFTQG---DSGSPTVGSSRSWKS 284
           D NLELQESGWEELRKEARKIEGDLDVKLSSYAKL  RFTQG   D GSP +GSSRSWKS
Sbjct: 3   DSNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKS 62

Query: 285 MEMEIESLLEKLQDTNDSMSRCAASATPTTSVSQKLARHRDILHEFIQEFRRIKGNISSM 464
           MEMEI+SLLEKL D NDSMSRCAASA P TSV+QKLARHRDILHEF QEFRRIKGNI+SM
Sbjct: 63  MEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSM 122

Query: 465 REHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVVQIDDVISQAQTTRSVLGSQ 644
           REHAELL+SVRDDIS++K SGSMSPRMQLLRERAAIHGS+  IDDVISQAQ TRSVLGSQ
Sbjct: 123 REHAELLTSVRDDISDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQ 182

Query: 645 RSMLGDVQGKVKQLSDKFPIIRGLLGAIKRKRSRDTLILAAVIAACTLFLIIYWLSK 815
           R++ GDVQGKVK L DKFPIIR LLG+I+RKRSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 183 RALFGDVQGKVKVLGDKFPIIRSLLGSIRRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|XP_002320713.1| predicted protein [Populus trichocarpa] gi|222861486|gb|EEE99028.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  391 bits (1004), Expect = e-106
 Identities = 201/241 (83%), Positives = 219/241 (90%), Gaps = 7/241 (2%)
 Frame = +3

Query: 114 DINLELQESGWEELRKEARKIEGDLDVKLSSYAKLSGRFTQG-------DSGSPTVGSSR 272
           D NLELQESGWEELR+EARKIEGDLDVKLSSYAKL  RFTQG       ++GSPTVGSSR
Sbjct: 3   DTNLELQESGWEELRREARKIEGDLDVKLSSYAKLGSRFTQGGGGGGYVETGSPTVGSSR 62

Query: 273 SWKSMEMEIESLLEKLQDTNDSMSRCAASATPTTSVSQKLARHRDILHEFIQEFRRIKGN 452
           SWKSMEMEI+S LEKL D ND+MSRCAASA P TSV+QKLARHRDILH+F QEFRRIKGN
Sbjct: 63  SWKSMEMEIQSSLEKLLDINDAMSRCAASAAPATSVTQKLARHRDILHDFTQEFRRIKGN 122

Query: 453 ISSMREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVVQIDDVISQAQTTRSV 632
           I+SMREH+ELLSSVRDDISEYKASGSMSPR+QLLRERAAIHGS+  IDDVI+QAQTTR+V
Sbjct: 123 INSMREHSELLSSVRDDISEYKASGSMSPRVQLLRERAAIHGSISHIDDVINQAQTTRAV 182

Query: 633 LGSQRSMLGDVQGKVKQLSDKFPIIRGLLGAIKRKRSRDTLILAAVIAACTLFLIIYWLS 812
           LGSQR+  GDVQGKVK L DKFPIIRGLLG+I+R+RSRDTLIL+AVIAACTLFLIIYWLS
Sbjct: 183 LGSQRAFFGDVQGKVKLLGDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLS 242

Query: 813 K 815
           K
Sbjct: 243 K 243


>ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arabidopsis lyrata subsp.
           lyrata] gi|297327840|gb|EFH58260.1| hypothetical protein
           ARALYDRAFT_903960 [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score =  389 bits (999), Expect = e-105
 Identities = 199/235 (84%), Positives = 216/235 (91%), Gaps = 3/235 (1%)
 Frame = +3

Query: 120 NLELQESGWEELRKEARKIEGDLDVKLSSYAKLSGRFTQG---DSGSPTVGSSRSWKSME 290
           +L+LQESGWEELR+EARKIEGDLDVKLSSYAKL  RFTQG   D+GSPTVGS RSWKSME
Sbjct: 5   SLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDAGSPTVGSGRSWKSME 64

Query: 291 MEIESLLEKLQDTNDSMSRCAASATPTTSVSQKLARHRDILHEFIQEFRRIKGNISSMRE 470
           MEI+SLLEKL D NDSMSRCAASA PTTSV+QKLARHRDILHE+ QEFRRIKGNI+SMRE
Sbjct: 65  MEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSMRE 124

Query: 471 HAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVVQIDDVISQAQTTRSVLGSQRS 650
           HAELLSSVRDDISEYKASGSMSP +Q+LRERA+IHGS+  IDDVI QAQ TR+VLGSQRS
Sbjct: 125 HAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQRS 184

Query: 651 MLGDVQGKVKQLSDKFPIIRGLLGAIKRKRSRDTLILAAVIAACTLFLIIYWLSK 815
           +  DVQGKVK L DKFP+IRGLLG+IKRKRSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 185 LFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


Top