BLASTX nr result

ID: Cimicifuga21_contig00019404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019404
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263902.1| PREDICTED: dolichyldiphosphatase 1 [Vitis vi...   293   5e-77
emb|CBI17482.3| unnamed protein product [Vitis vinifera]              277   3e-72
ref|XP_002310818.1| predicted protein [Populus trichocarpa] gi|2...   268   2e-69
ref|XP_002521546.1| conserved hypothetical protein [Ricinus comm...   258   3e-66
gb|AFK49290.1| unknown [Lotus japonicus]                              250   5e-64

>ref|XP_002263902.1| PREDICTED: dolichyldiphosphatase 1 [Vitis vinifera]
            gi|147812558|emb|CAN70630.1| hypothetical protein
            VITISV_020724 [Vitis vinifera]
          Length = 283

 Score =  293 bits (750), Expect = 5e-77
 Identities = 156/283 (55%), Positives = 203/283 (71%), Gaps = 4/283 (1%)
 Frame = -2

Query: 1124 TAISYRPTFKFSPRLP-SQKPISPHKLSISESRFS---SKHNFRLTAKNRIWGQTETSMT 957
            T + +R  F FSP+   S KPIS    S S   FS   S   F L  KNR+ G    +MT
Sbjct: 5    TTLLHRSPFPFSPKPHRSLKPISIPAFSTSNLAFSGGFSSEKF-LFRKNRVGGPL--TMT 61

Query: 956  ELTKTPSPTSTDELEGFGIMEQEAILSNGSSGFRSDFMSGGLESTINKMSKWLVAVLFGI 777
            EL +T +  + ++ EG  ++E+EA ++ GSS F +D ++GGLE+T+N++SKWLVA LFGI
Sbjct: 62   ELVRTSAFRNGNDDEGATMIEEEAFIT-GSSEFPADIVAGGLEATLNRLSKWLVAALFGI 120

Query: 776  AILWKHDAEALWAGMGCVMNAGLSVTLKQIFNQERPFSTLRSDPGMPSSHAQSIFFAVVF 597
             ILW+HDAE+LWA MG V+N  LSVTLKQI NQERP S LRS PGMPSSHAQSIFF VVF
Sbjct: 121  VILWRHDAESLWAAMGSVLNTVLSVTLKQILNQERPVSALRSGPGMPSSHAQSIFFTVVF 180

Query: 596  AILSMVKFLGLNKITVALGVLALASGSYLSWLRVSQRLHTISQVSVGAVIGTIFSILWFQ 417
             ILS+V++LG+N +T+ +  LALA GSYLSWLRVSQ+ HTISQV VG+ +G++F ILW  
Sbjct: 181  TILSVVEWLGINGLTLTISGLALALGSYLSWLRVSQQFHTISQVLVGSAVGSVFCILWLW 240

Query: 416  AWYAFVLKAFIASLWVRIFVVLGSAMVCASFFVYAIQHWLTEE 288
            +W AFVL A+ + LWVR+ V++G+   C  F ++ I+HWL EE
Sbjct: 241  SWEAFVLNAYTSYLWVRVLVIVGAVGFCLGFVLHVIKHWLLEE 283


>emb|CBI17482.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  277 bits (709), Expect = 3e-72
 Identities = 134/225 (59%), Positives = 176/225 (78%)
 Frame = -2

Query: 962 MTELTKTPSPTSTDELEGFGIMEQEAILSNGSSGFRSDFMSGGLESTINKMSKWLVAVLF 783
           MTEL +T +  + ++ EG  ++E+EA ++ GSS F +D ++GGLE+T+N++SKWLVA LF
Sbjct: 1   MTELVRTSAFRNGNDDEGATMIEEEAFIT-GSSEFPADIVAGGLEATLNRLSKWLVAALF 59

Query: 782 GIAILWKHDAEALWAGMGCVMNAGLSVTLKQIFNQERPFSTLRSDPGMPSSHAQSIFFAV 603
           GI ILW+HDAE+LWA MG V+N  LSVTLKQI NQERP S LRS PGMPSSHAQSIFF V
Sbjct: 60  GIVILWRHDAESLWAAMGSVLNTVLSVTLKQILNQERPVSALRSGPGMPSSHAQSIFFTV 119

Query: 602 VFAILSMVKFLGLNKITVALGVLALASGSYLSWLRVSQRLHTISQVSVGAVIGTIFSILW 423
           VF ILS+V++LG+N +T+ +  LALA GSYLSWLRVSQ+ HTISQV VG+ +G++F ILW
Sbjct: 120 VFTILSVVEWLGINGLTLTISGLALALGSYLSWLRVSQQFHTISQVLVGSAVGSVFCILW 179

Query: 422 FQAWYAFVLKAFIASLWVRIFVVLGSAMVCASFFVYAIQHWLTEE 288
             +W AFVL A+ + LWVR+ V++G+   C  F ++ I+HWL EE
Sbjct: 180 LWSWEAFVLNAYTSYLWVRVLVIVGAVGFCLGFVLHVIKHWLLEE 224


>ref|XP_002310818.1| predicted protein [Populus trichocarpa] gi|222853721|gb|EEE91268.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  268 bits (685), Expect = 2e-69
 Identities = 134/228 (58%), Positives = 174/228 (76%), Gaps = 3/228 (1%)
 Frame = -2

Query: 962 MTELTKTP---SPTSTDELEGFGIMEQEAILSNGSSGFRSDFMSGGLESTINKMSKWLVA 792
           MTEL +     S   +D  E  G+ +QEA++ +G + F+S  ++ GLE+T+N++SKWLVA
Sbjct: 1   MTELVRMSAFRSGNGSDSEESTGLFQQEAVI-DGLNEFQSGLLADGLEATLNRLSKWLVA 59

Query: 791 VLFGIAILWKHDAEALWAGMGCVMNAGLSVTLKQIFNQERPFSTLRSDPGMPSSHAQSIF 612
            LFG  ILW+HDAEA+WA +G ++N+ LSV LK+IFNQERP STLRSDPGMPSSH QSIF
Sbjct: 60  ALFGAVILWRHDAEAMWAVLGSIVNSILSVILKRIFNQERPDSTLRSDPGMPSSHGQSIF 119

Query: 611 FAVVFAILSMVKFLGLNKITVALGVLALASGSYLSWLRVSQRLHTISQVSVGAVIGTIFS 432
           F VVFAILS+V++LG+N  ++ LG L LA G+YL+WLRVSQ LHTISQV+ GA +G IFS
Sbjct: 120 FTVVFAILSVVEWLGVNGFSLILGALILAFGTYLTWLRVSQGLHTISQVAAGAAVGFIFS 179

Query: 431 ILWFQAWYAFVLKAFIASLWVRIFVVLGSAMVCASFFVYAIQHWLTEE 288
           I WF +W AFVLKAFI+SL VRI V++ +A  C  F VY I++W  +E
Sbjct: 180 IFWFWSWDAFVLKAFISSLSVRIIVIMAAAASCMGFLVYVIRYWFRDE 227


>ref|XP_002521546.1| conserved hypothetical protein [Ricinus communis]
            gi|223539224|gb|EEF40817.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 279

 Score =  258 bits (658), Expect = 3e-66
 Identities = 138/284 (48%), Positives = 181/284 (63%), Gaps = 4/284 (1%)
 Frame = -2

Query: 1127 TTAISYRPTFKFSPRLPSQ----KPISPHKLSISESRFSSKHNFRLTAKNRIWGQTETSM 960
            T A+ ++PTFK S   PS+    K     +L  S S F S    +             +M
Sbjct: 4    TVALLHKPTFKLSFSRPSKLDSCKSTLLLRLPASRSIFFSGFGSKKAVSK--------TM 55

Query: 959  TELTKTPSPTSTDELEGFGIMEQEAILSNGSSGFRSDFMSGGLESTINKMSKWLVAVLFG 780
            TE+  T +  S D  E   I++ +  L++ SS FRS  M+ G E  +N++SKWLVA LFG
Sbjct: 56   TEMVWTSAFRSGDGEENVKILQPDT-LADDSSDFRSQLMARGFEPLLNRLSKWLVAALFG 114

Query: 779  IAILWKHDAEALWAGMGCVMNAGLSVTLKQIFNQERPFSTLRSDPGMPSSHAQSIFFAVV 600
            + +LW+HDAEALW  MG V+NA LSVTLK++FNQERPF+T +SDPGMPSSHAQ IF+ VV
Sbjct: 115  VVLLWRHDAEALWIAMGSVLNAILSVTLKRVFNQERPFATAKSDPGMPSSHAQCIFYTVV 174

Query: 599  FAILSMVKFLGLNKITVALGVLALASGSYLSWLRVSQRLHTISQVSVGAVIGTIFSILWF 420
            F  LS+ ++LG+N+ T+ +  L LA GSY SWLRVSQ+ HT SQV VGA  G++FS LW+
Sbjct: 175  FCSLSVTEWLGVNEFTLLISGLNLALGSYFSWLRVSQQYHTASQVVVGAAAGSLFSFLWY 234

Query: 419  QAWYAFVLKAFIASLWVRIFVVLGSAMVCASFFVYAIQHWLTEE 288
              W   VL  F +SLWVRI VV  +   C  F +Y I+HWL +E
Sbjct: 235  WLWQTIVLDEFNSSLWVRIVVVFAAFSFCLGFLLYVIRHWLKDE 278


>gb|AFK49290.1| unknown [Lotus japonicus]
          Length = 286

 Score =  250 bits (638), Expect = 5e-64
 Identities = 140/288 (48%), Positives = 185/288 (64%), Gaps = 8/288 (2%)
 Frame = -2

Query: 1127 TTAISYRPT-FKFSPRLPSQKPISPHKLSISESR---FSSKHNFR----LTAKNRIWGQT 972
            TTAI + P+     P L  Q+ +  +    + +R   FS+  +F     +  K  +   T
Sbjct: 4    TTAICFHPSSILHRPVLLKQRYLKKNTTLFASARSHSFSASRSFLSGEFVPKKLSLGRNT 63

Query: 971  ETSMTELTKTPSPTSTDELEGFGIMEQEAILSNGSSGFRSDFMSGGLESTINKMSKWLVA 792
                + +  + S    +  E   + EQEA++  GSS     F+S  +E  +N++SKW+VA
Sbjct: 64   NWVSSPMNASASRDGGNSDENIQVFEQEALIDAGSS----KFLSQDMEYKLNRLSKWIVA 119

Query: 791  VLFGIAILWKHDAEALWAGMGCVMNAGLSVTLKQIFNQERPFSTLRSDPGMPSSHAQSIF 612
             LF   ILW+HD EALW G G V+NA LSV LK+I NQERP ST++SDPGMPSSHAQSIF
Sbjct: 120  ALFAGLILWRHDVEALWFGAGSVLNAVLSVWLKRILNQERP-STVKSDPGMPSSHAQSIF 178

Query: 611  FAVVFAILSMVKFLGLNKITVALGVLALASGSYLSWLRVSQRLHTISQVSVGAVIGTIFS 432
            F V+F ILS +++LGLN  T+A+  L LA GS+ S+LRVSQ+LHT SQV VG  IG+I+S
Sbjct: 179  FTVIFVILSSIEWLGLNGFTIAISGLVLAFGSFFSYLRVSQQLHTTSQVLVGGAIGSIYS 238

Query: 431  ILWFQAWYAFVLKAFIASLWVRIFVVLGSAMVCASFFVYAIQHWLTEE 288
            ILW+  W  FVL AFIASLWVRI VVLGSA +C  F ++A +HWL  E
Sbjct: 239  ILWYWLWKHFVLDAFIASLWVRIIVVLGSAGLCLGFVIFAFRHWLRNE 286


Top