BLASTX nr result
ID: Cimicifuga21_contig00019392
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00019392 (599 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc... 114 1e-23 ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc... 113 2e-23 ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|2... 104 1e-20 ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ric... 104 1e-20 ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Viti... 103 2e-20 >ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] Length = 892 Score = 114 bits (286), Expect = 1e-23 Identities = 63/107 (58%), Positives = 73/107 (68%), Gaps = 10/107 (9%) Frame = +2 Query: 305 DVSSDSLNDVRFVQDRVLLI----------GSSGVCWNEVGVDGDDCAMEQSDVSLRQWL 454 + S DS R +DRVLL G SG+C +EV VD CA+E D+SLRQWL Sbjct: 41 EASQDS--GFRKERDRVLLAQGGQPKNLGGGFSGLCEDEVEVDPFFCAVEWGDISLRQWL 98 Query: 455 DTPERIISHLECLHIFRQIVEMVDLAHSQGVVLHNVRPSCFVMSSVN 595 D PER + ECLHIFRQIVE+V +AHSQGVV+HNVRPSCFVMSS N Sbjct: 99 DKPERSVDAFECLHIFRQIVEIVSVAHSQGVVVHNVRPSCFVMSSFN 145 >ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] Length = 892 Score = 113 bits (283), Expect = 2e-23 Identities = 54/77 (70%), Positives = 62/77 (80%) Frame = +2 Query: 365 GSSGVCWNEVGVDGDDCAMEQSDVSLRQWLDTPERIISHLECLHIFRQIVEMVDLAHSQG 544 G SG+C +EV VD CA+E D+SLRQWLD PER + ECLHIFRQIVE+V +AHSQG Sbjct: 70 GFSGLCEDEVEVDPFFCAVEWGDISLRQWLDKPERSVGAFECLHIFRQIVEIVSVAHSQG 129 Query: 545 VVLHNVRPSCFVMSSVN 595 VV+HNVRPSCFVMSS N Sbjct: 130 VVVHNVRPSCFVMSSFN 146 >ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1| predicted protein [Populus trichocarpa] Length = 857 Score = 104 bits (260), Expect = 1e-20 Identities = 50/75 (66%), Positives = 59/75 (78%) Frame = +2 Query: 371 SGVCWNEVGVDGDDCAMEQSDVSLRQWLDTPERIISHLECLHIFRQIVEMVDLAHSQGVV 550 SGVC +E VD ME +DVSLR WL+ PER + ECLHIFRQIVE+V++AHSQG+V Sbjct: 59 SGVCEDEAAVDHFVQNMEWNDVSLRHWLNKPERSVDEFECLHIFRQIVEIVNVAHSQGIV 118 Query: 551 LHNVRPSCFVMSSVN 595 +HNVRPSCFVMSS N Sbjct: 119 VHNVRPSCFVMSSFN 133 >ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis] gi|223526576|gb|EEF28831.1| ubiquitin ligase protein cop1, putative [Ricinus communis] Length = 889 Score = 104 bits (259), Expect = 1e-20 Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 8/91 (8%) Frame = +2 Query: 347 DRVLL--------IGSSGVCWNEVGVDGDDCAMEQSDVSLRQWLDTPERIISHLECLHIF 502 DRV+L +G SG +EV VD A+E DVSLRQWLD PER + ECLHIF Sbjct: 42 DRVVLAHHNLKNQVGLSGGYKDEVAVDPFARAIEWGDVSLRQWLDKPERSVDEFECLHIF 101 Query: 503 RQIVEMVDLAHSQGVVLHNVRPSCFVMSSVN 595 RQIV +V+LAHSQG+V+HNVRPSCFVM+S N Sbjct: 102 RQIVGIVNLAHSQGIVVHNVRPSCFVMTSFN 132 >ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera] Length = 903 Score = 103 bits (258), Expect = 2e-20 Identities = 62/131 (47%), Positives = 80/131 (61%), Gaps = 15/131 (11%) Frame = +2 Query: 248 LNACVTSGGSTGLRRE-NRLDVSSDSLNDVRFV-----QDRVLL---------IGSSGVC 382 LN + S G +R NR+ +S + +D F+ +D VL +G S VC Sbjct: 18 LNVSIVSHGRNPRQRHANRIGLSGGASHDSGFISGRKERDHVLSSHTKNHKNQVGISQVC 77 Query: 383 WNEVGVDGDDCAMEQSDVSLRQWLDTPERIISHLECLHIFRQIVEMVDLAHSQGVVLHNV 562 ++V +D A+E DVSLR WLD PER + LECLHIF QI E+V+ AHSQGVV++NV Sbjct: 78 DDDVALDPFVRAIEWGDVSLRHWLDKPERRVDALECLHIFTQIAEIVNAAHSQGVVVNNV 137 Query: 563 RPSCFVMSSVN 595 RPSCFVMSS N Sbjct: 138 RPSCFVMSSFN 148