BLASTX nr result

ID: Cimicifuga21_contig00019392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019392
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...   114   1e-23
ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...   113   2e-23
ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|2...   104   1e-20
ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ric...   104   1e-20
ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Viti...   103   2e-20

>ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score =  114 bits (286), Expect = 1e-23
 Identities = 63/107 (58%), Positives = 73/107 (68%), Gaps = 10/107 (9%)
 Frame = +2

Query: 305 DVSSDSLNDVRFVQDRVLLI----------GSSGVCWNEVGVDGDDCAMEQSDVSLRQWL 454
           + S DS    R  +DRVLL           G SG+C +EV VD   CA+E  D+SLRQWL
Sbjct: 41  EASQDS--GFRKERDRVLLAQGGQPKNLGGGFSGLCEDEVEVDPFFCAVEWGDISLRQWL 98

Query: 455 DTPERIISHLECLHIFRQIVEMVDLAHSQGVVLHNVRPSCFVMSSVN 595
           D PER +   ECLHIFRQIVE+V +AHSQGVV+HNVRPSCFVMSS N
Sbjct: 99  DKPERSVDAFECLHIFRQIVEIVSVAHSQGVVVHNVRPSCFVMSSFN 145


>ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score =  113 bits (283), Expect = 2e-23
 Identities = 54/77 (70%), Positives = 62/77 (80%)
 Frame = +2

Query: 365 GSSGVCWNEVGVDGDDCAMEQSDVSLRQWLDTPERIISHLECLHIFRQIVEMVDLAHSQG 544
           G SG+C +EV VD   CA+E  D+SLRQWLD PER +   ECLHIFRQIVE+V +AHSQG
Sbjct: 70  GFSGLCEDEVEVDPFFCAVEWGDISLRQWLDKPERSVGAFECLHIFRQIVEIVSVAHSQG 129

Query: 545 VVLHNVRPSCFVMSSVN 595
           VV+HNVRPSCFVMSS N
Sbjct: 130 VVVHNVRPSCFVMSSFN 146


>ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1|
           predicted protein [Populus trichocarpa]
          Length = 857

 Score =  104 bits (260), Expect = 1e-20
 Identities = 50/75 (66%), Positives = 59/75 (78%)
 Frame = +2

Query: 371 SGVCWNEVGVDGDDCAMEQSDVSLRQWLDTPERIISHLECLHIFRQIVEMVDLAHSQGVV 550
           SGVC +E  VD     ME +DVSLR WL+ PER +   ECLHIFRQIVE+V++AHSQG+V
Sbjct: 59  SGVCEDEAAVDHFVQNMEWNDVSLRHWLNKPERSVDEFECLHIFRQIVEIVNVAHSQGIV 118

Query: 551 LHNVRPSCFVMSSVN 595
           +HNVRPSCFVMSS N
Sbjct: 119 VHNVRPSCFVMSSFN 133


>ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
           gi|223526576|gb|EEF28831.1| ubiquitin ligase protein
           cop1, putative [Ricinus communis]
          Length = 889

 Score =  104 bits (259), Expect = 1e-20
 Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
 Frame = +2

Query: 347 DRVLL--------IGSSGVCWNEVGVDGDDCAMEQSDVSLRQWLDTPERIISHLECLHIF 502
           DRV+L        +G SG   +EV VD    A+E  DVSLRQWLD PER +   ECLHIF
Sbjct: 42  DRVVLAHHNLKNQVGLSGGYKDEVAVDPFARAIEWGDVSLRQWLDKPERSVDEFECLHIF 101

Query: 503 RQIVEMVDLAHSQGVVLHNVRPSCFVMSSVN 595
           RQIV +V+LAHSQG+V+HNVRPSCFVM+S N
Sbjct: 102 RQIVGIVNLAHSQGIVVHNVRPSCFVMTSFN 132


>ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera]
          Length = 903

 Score =  103 bits (258), Expect = 2e-20
 Identities = 62/131 (47%), Positives = 80/131 (61%), Gaps = 15/131 (11%)
 Frame = +2

Query: 248 LNACVTSGGSTGLRRE-NRLDVSSDSLNDVRFV-----QDRVLL---------IGSSGVC 382
           LN  + S G    +R  NR+ +S  + +D  F+     +D VL          +G S VC
Sbjct: 18  LNVSIVSHGRNPRQRHANRIGLSGGASHDSGFISGRKERDHVLSSHTKNHKNQVGISQVC 77

Query: 383 WNEVGVDGDDCAMEQSDVSLRQWLDTPERIISHLECLHIFRQIVEMVDLAHSQGVVLHNV 562
            ++V +D    A+E  DVSLR WLD PER +  LECLHIF QI E+V+ AHSQGVV++NV
Sbjct: 78  DDDVALDPFVRAIEWGDVSLRHWLDKPERRVDALECLHIFTQIAEIVNAAHSQGVVVNNV 137

Query: 563 RPSCFVMSSVN 595
           RPSCFVMSS N
Sbjct: 138 RPSCFVMSSFN 148


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