BLASTX nr result

ID: Cimicifuga21_contig00019366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019366
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281747.1| PREDICTED: FAS-associated factor 2-B [Vitis ...    66   3e-09
ref|XP_002511359.1| UBX domain-containing protein 8-B, putative ...    58   9e-07
ref|XP_004157781.1| PREDICTED: LOW QUALITY PROTEIN: FAS-associat...    55   8e-06
ref|XP_004152486.1| PREDICTED: FAS-associated factor 2-B-like [C...    55   8e-06

>ref|XP_002281747.1| PREDICTED: FAS-associated factor 2-B [Vitis vinifera]
          Length = 382

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/84 (46%), Positives = 53/84 (63%)
 Frame = +3

Query: 6   MSFTSRDNTRASDIQAYCNGMMRRMVSLPRSILGGVSRAMTDRMHLMTLGTLGGRDHSHN 185
           MS   R++ RA   +A C+G++RRMVSLPRSI+GGVSR M   + LM    +GGR + H 
Sbjct: 1   MSSAIRESGRAL-AEATCHGIVRRMVSLPRSIIGGVSRVMGHGIDLM---GIGGRRNQHL 56

Query: 186 SSTSYQTQHFTQEPHTILEEWVFL 257
              ++Q  H  Q+P  + EEW FL
Sbjct: 57  LQPNFQLPH-PQQPEMVPEEWAFL 79


>ref|XP_002511359.1| UBX domain-containing protein 8-B, putative [Ricinus communis]
           gi|223550474|gb|EEF51961.1| UBX domain-containing
           protein 8-B, putative [Ricinus communis]
          Length = 392

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
 Frame = +3

Query: 6   MSFTSRDNTRASDIQAYCNGMMRRMVSLPRSILGGVSRAMTDRMHLMTLGTLGGRDHSHN 185
           MS T RD+ RA   +A CNG++RRMVSLPRSI+GG SR M   +  + +G   GR    N
Sbjct: 1   MSSTVRDSARAMR-EASCNGIVRRMVSLPRSIVGGFSRVMGHGIGRIGIGIGSGR-RDQN 58

Query: 186 SSTSYQTQHFTQEPHTIL--EEWVFL 257
              ++  Q   Q+ H ++  EEW FL
Sbjct: 59  LPLNFTVQP-PQDHHPLIAPEEWTFL 83


>ref|XP_004157781.1| PREDICTED: LOW QUALITY PROTEIN: FAS-associated factor 2-B-like
           [Cucumis sativus]
          Length = 370

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/84 (44%), Positives = 48/84 (57%)
 Frame = +3

Query: 6   MSFTSRDNTRASDIQAYCNGMMRRMVSLPRSILGGVSRAMTDRMHLMTLGTLGGRDHSHN 185
           MS T R+ +R ++  A  NG++RRMV+LPRSILGG SR M            GGR+ +  
Sbjct: 1   MSSTMRETSRLAE--ASINGIIRRMVNLPRSILGGFSRVMN-----------GGRNQTLP 47

Query: 186 SSTSYQTQHFTQEPHTILEEWVFL 257
           S  SYQ Q   Q+   + EEW FL
Sbjct: 48  S--SYQYQILQQDTPYVPEEWSFL 69


>ref|XP_004152486.1| PREDICTED: FAS-associated factor 2-B-like [Cucumis sativus]
          Length = 370

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/84 (44%), Positives = 48/84 (57%)
 Frame = +3

Query: 6   MSFTSRDNTRASDIQAYCNGMMRRMVSLPRSILGGVSRAMTDRMHLMTLGTLGGRDHSHN 185
           MS T R+ +R ++  A  NG++RRMV+LPRSILGG SR M            GGR+ +  
Sbjct: 1   MSSTMRETSRLAE--ASINGIIRRMVNLPRSILGGFSRVMN-----------GGRNQTLP 47

Query: 186 SSTSYQTQHFTQEPHTILEEWVFL 257
           S  SYQ Q   Q+   + EEW FL
Sbjct: 48  S--SYQYQILQQDTPYVPEEWSFL 69


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