BLASTX nr result

ID: Cimicifuga21_contig00019356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019356
         (1607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA liga...   641   0.0  
ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI...   641   0.0  
ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus comm...   629   e-178
emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera]   627   e-177
ref|XP_002331538.1| acyl:coa ligase acetate-coa synthetase-like ...   608   e-172

>ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
          Length = 588

 Score =  641 bits (1653), Expect = 0.0
 Identities = 297/418 (71%), Positives = 356/418 (85%), Gaps = 3/418 (0%)
 Frame = +2

Query: 2    RSLVLQAISLFPPNAQVPRLVFINTDNVAPPPDVDL--DYECLIEMGDAAYKWVQPESEW 175
            R L+L+++SLFPP++Q P LV I  D  +PP  VD    YE ++  GD  +KW++PESEW
Sbjct: 161  RPLILESLSLFPPSSQRPLLVLITDDEDSPPSTVDFLCTYEDMVGRGDPEFKWIRPESEW 220

Query: 176  APMVLNYTSGTTSSPKGVVHSHRGLYITSVDSLIEWSVPKQPVYMWTLPMFHANGWCYSW 355
             PM+LNYTSGTTSSPKGVVH HRG++I +VDSLI+W VPKQPVY+WTLPMFHANGW + W
Sbjct: 221  NPMILNYTSGTTSSPKGVVHCHRGIFIVTVDSLIDWCVPKQPVYLWTLPMFHANGWSFPW 280

Query: 356  AMAAVGGANVCLRRFDAAKLYGEIHKHGVTHMCGAPVVLNMLANAPNPEPLLHPVHILTA 535
             MAAVGG NVCLR+FDA+ +Y  I  H VTHMCGAPVVLNML+N P  EPL +PV ILTA
Sbjct: 281  GMAAVGGTNVCLRKFDASVIYEAIRVHRVTHMCGAPVVLNMLSNWPGTEPLKNPVQILTA 340

Query: 536  GAPPPAAVLMRTESLGFIVGHGYGLTETAGVVISCAWKREWNRFPASEQARLKARQGVRT 715
            GAPPPAA+L+RTES GFIV HGYGLTET G+V+SC WK++WNR PA+E+ARLK+RQGVRT
Sbjct: 341  GAPPPAAILLRTESRGFIVSHGYGLTETGGLVVSCVWKQKWNRLPATERARLKSRQGVRT 400

Query: 716  NGMADMDVVDSESGISVKRDGQTLGEVVVRGACVMLGYLKDPIGTDKSMRENGWFYTGDV 895
             GM ++DV+D  SG+SVKRDG +LGE+V+RG C+MLGYLKDP GT KS+ ++GWF+TGDV
Sbjct: 401  VGMTEVDVLDPGSGLSVKRDGSSLGEIVLRGGCIMLGYLKDPKGTSKSLTDDGWFFTGDV 460

Query: 896  GVMHPDGYMEIKDRSKDVIISGGENISSVEVESVLYLHPAINEAAVVARPDECWGETPCA 1075
            GVMH DGY+EIKDRSKDVIISGGEN+SSVEVESVLY HPA+NEAAVVARPD+ WGETPCA
Sbjct: 461  GVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPDDFWGETPCA 520

Query: 1076 FVSLKPDST-KPTDKEIMDFCRSQMPHYMAPKTVIFTTELPKSSTGKIHKFVLRERAR 1246
            FVSLKP+ T +PT+KEIM++CR++MPHYM PKTV+F  ELPK+STGKI KFVLRE A+
Sbjct: 521  FVSLKPERTEQPTEKEIMEYCRARMPHYMVPKTVVFEEELPKTSTGKIQKFVLRETAK 578


>ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
          Length = 549

 Score =  641 bits (1653), Expect = 0.0
 Identities = 299/418 (71%), Positives = 356/418 (85%), Gaps = 3/418 (0%)
 Frame = +2

Query: 2    RSLVLQAISLFPPNAQVPRLVFINTDNVAPPPDVDL--DYECLIEMGDAAYKWVQPESEW 175
            R+L+L+A+SLFPPN Q P LV I  + VAP   VD    YE L+E GD  +KWV+PESEW
Sbjct: 122  RALILEALSLFPPNTQWPLLVLIADEEVAPSSTVDFICTYEDLVERGDPEFKWVRPESEW 181

Query: 176  APMVLNYTSGTTSSPKGVVHSHRGLYITSVDSLIEWSVPKQPVYMWTLPMFHANGWCYSW 355
             P++LNYTSGTTSSPKGVVH HRG++I ++DSL+EWSVPKQPVY+WTLPMFH NGW ++W
Sbjct: 182  DPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLWTLPMFHGNGWTFTW 241

Query: 356  AMAAVGGANVCLRRFDAAKLYGEIHKHGVTHMCGAPVVLNMLANAPNPEPLLHPVHILTA 535
             MAA+GG NVCLR+FDA  +Y  I K+G+THMC APVVLNML+N PN +PL  PV ILTA
Sbjct: 242  GMAAIGGTNVCLRKFDARIIYDAIPKYGITHMCAAPVVLNMLSNYPNHQPLGDPVKILTA 301

Query: 536  GAPPPAAVLMRTESLGFIVGHGYGLTETAGVVISCAWKREWNRFPASEQARLKARQGVRT 715
            GAPPP +VL+RTESLGF+V HGYG+TETAGVV+SCAWK +W+RFPASE+AR+KARQGVRT
Sbjct: 302  GAPPPYSVLLRTESLGFVVSHGYGMTETAGVVVSCAWKPQWDRFPASERARVKARQGVRT 361

Query: 716  NGMADMDVVDSESGISVKRDGQTLGEVVVRGACVMLGYLKDPIGTDKSMRENGWFYTGDV 895
              M ++DVVD +SG+SVKRDG +LGE+V+RGAC+MLGYLKDP GT K M + GW YTGDV
Sbjct: 362  VVMTEVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTSKCMSKEGWLYTGDV 421

Query: 896  GVMHPDGYMEIKDRSKDVIISGGENISSVEVESVLYLHPAINEAAVVARPDECWGETPCA 1075
             VMHPDGY+EIKDRSKDVIISGGEN+SSVEVESVLY HPA+NEAAVVARPD+ WGETPCA
Sbjct: 422  AVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPDDFWGETPCA 481

Query: 1076 FVSLKPDS-TKPTDKEIMDFCRSQMPHYMAPKTVIFTTELPKSSTGKIHKFVLRERAR 1246
            FVSLKP+S  KPT KE+M++CR++MPHYM PKTV+F  ELPK+STGKI KF LR+ A+
Sbjct: 482  FVSLKPESPDKPTAKEMMEYCRARMPHYMVPKTVVFKEELPKTSTGKIQKFKLRDIAK 539


>ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus communis]
            gi|223538956|gb|EEF40553.1| AMP dependent ligase,
            putative [Ricinus communis]
          Length = 556

 Score =  629 bits (1621), Expect = e-178
 Identities = 292/425 (68%), Positives = 354/425 (83%), Gaps = 10/425 (2%)
 Frame = +2

Query: 2    RSLVLQAISLFPPNAQVPRLVFINTDNVAPPP---------DVDLDYECLIEMGDAAYKW 154
            R LVL+A+SLFP + + P LV I  D+ AP           D    YE ++E GD  +KW
Sbjct: 122  RDLVLEAVSLFPSSVKRPTLVLITDDDEAPASSSTSSSSTVDFCCTYESMVEKGDPEFKW 181

Query: 155  VQPESEWAPMVLNYTSGTTSSPKGVVHSHRGLYITSVDSLIEWSVPKQPVYMWTLPMFHA 334
            VQP+SEW PM+LNYTSGTTSSPKGVVH HRG+YI +V+SLI+W+VP+QPVY+WTLP+FHA
Sbjct: 182  VQPQSEWDPMILNYTSGTTSSPKGVVHCHRGIYIITVESLIDWNVPRQPVYLWTLPLFHA 241

Query: 335  NGWCYSWAMAAVGGANVCLRRFDAAKLYGEIHKHGVTHMCGAPVVLNMLANAPNPEPLLH 514
            NGW + W MAAVGG N+C+R+FDA+ +YG I +HGVTHMCGAPVVLNML N+P+ EPL  
Sbjct: 242  NGWSFPWGMAAVGGTNICIRKFDASSIYGLIKRHGVTHMCGAPVVLNMLTNSPDNEPLKR 301

Query: 515  PVHILTAGAPPPAAVLMRTESLGFIVGHGYGLTETAGVVISCAWKREWNRFPASEQARLK 694
            PVHILTAGAPPPAAVL RTESLGF+V HGYGLTETAG+V+SCAWK +WN  PASE+ARLK
Sbjct: 302  PVHILTAGAPPPAAVLFRTESLGFVVSHGYGLTETAGLVVSCAWKPKWNTVPASERARLK 361

Query: 695  ARQGVRTNGMADMDVVDSESGISVKRDGQTLGEVVVRGACVMLGYLKDPIGTDKSMRENG 874
            ARQGVR  G  ++DV+D ++G+SVKRDG +LGE+V+RG CVM+GYLKDP GT K ++++G
Sbjct: 362  ARQGVRIAGFTEIDVIDPKTGLSVKRDGLSLGEIVLRGGCVMMGYLKDPDGTSKCLKDDG 421

Query: 875  WFYTGDVGVMHPDGYMEIKDRSKDVIISGGENISSVEVESVLYLHPAINEAAVVARPDEC 1054
            WFYTGDVGVMHPDGY+EIKDRSKDVIISGGENISSVEVESVLY +P +NEAAVVARPDE 
Sbjct: 422  WFYTGDVGVMHPDGYLEIKDRSKDVIISGGENISSVEVESVLYSNPVVNEAAVVARPDEY 481

Query: 1055 WGETPCAFVSLKPDS-TKPTDKEIMDFCRSQMPHYMAPKTVIFTTELPKSSTGKIHKFVL 1231
            WGETPCAFVSL+  +  K ++K+I+++CR +MPHYM PKTV+F  ELPK+STGKI KFVL
Sbjct: 482  WGETPCAFVSLRDGAREKVSEKDIIEYCREKMPHYMVPKTVVFKEELPKTSTGKIQKFVL 541

Query: 1232 RERAR 1246
            R+ A+
Sbjct: 542  RDIAK 546


>emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera]
          Length = 537

 Score =  627 bits (1616), Expect = e-177
 Identities = 294/416 (70%), Positives = 349/416 (83%), Gaps = 1/416 (0%)
 Frame = +2

Query: 2    RSLVLQAISLFPPNAQVPRLVFINTDNVAPPPDVDLDYECLIEMGDAAYKWVQPESEWAP 181
            R+L+L+A+SLFPPN Q P LV I  + VAP              GD  +KWV+PESEW P
Sbjct: 122  RALILEALSLFPPNTQWPLLVLIADEEVAPSST----------RGDPEFKWVRPESEWDP 171

Query: 182  MVLNYTSGTTSSPKGVVHSHRGLYITSVDSLIEWSVPKQPVYMWTLPMFHANGWCYSWAM 361
            ++LNYTSGTTSSPKGVVH HRG++I ++DSL+EWSVPKQPVY+WTLPMFH NGW ++W M
Sbjct: 172  IILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLWTLPMFHGNGWTFTWGM 231

Query: 362  AAVGGANVCLRRFDAAKLYGEIHKHGVTHMCGAPVVLNMLANAPNPEPLLHPVHILTAGA 541
            AAVGG NVCLR+FDA  +Y  I K+G+THMC APVVLNML+N PN +PL +PV ILTAGA
Sbjct: 232  AAVGGTNVCLRKFDARIIYDAIPKYGITHMCAAPVVLNMLSNYPNHQPLGYPVKILTAGA 291

Query: 542  PPPAAVLMRTESLGFIVGHGYGLTETAGVVISCAWKREWNRFPASEQARLKARQGVRTNG 721
            PPP +VL+RTESLGF+V HGYG+TETAGVV+SCAWK +W+RFPASE+AR+KARQGVRT  
Sbjct: 292  PPPYSVLLRTESLGFVVSHGYGMTETAGVVVSCAWKPQWDRFPASERARVKARQGVRTVV 351

Query: 722  MADMDVVDSESGISVKRDGQTLGEVVVRGACVMLGYLKDPIGTDKSMRENGWFYTGDVGV 901
            M ++DVVD +SG+SVKRDG +LGE+V+RGAC+MLGYLKDP GT K M + GW YTGDV V
Sbjct: 352  MTEVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTSKCMSKEGWLYTGDVAV 411

Query: 902  MHPDGYMEIKDRSKDVIISGGENISSVEVESVLYLHPAINEAAVVARPDECWGETPCAFV 1081
            MHPDGY+EIKDRSKDVIISGGEN+SSVEVESVLY HPA+NEAAVVARPD+ WGETPCAFV
Sbjct: 412  MHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPDDFWGETPCAFV 471

Query: 1082 SLKPDS-TKPTDKEIMDFCRSQMPHYMAPKTVIFTTELPKSSTGKIHKFVLRERAR 1246
            SLKP S  KPT KE+M++CR++MPHYM PKTV+F  ELPK+STGKI KF LR+ A+
Sbjct: 472  SLKPGSPDKPTAKEMMEYCRARMPHYMVPKTVVFKEELPKTSTGKIQKFKLRDIAK 527


>ref|XP_002331538.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
            trichocarpa] gi|222873762|gb|EEF10893.1| acyl:coa ligase
            acetate-coa synthetase-like protein [Populus trichocarpa]
          Length = 554

 Score =  608 bits (1569), Expect = e-172
 Identities = 291/422 (68%), Positives = 347/422 (82%), Gaps = 8/422 (1%)
 Frame = +2

Query: 5    SLVLQAISLFPPNAQVPRLVFINTDNVA----PPPDVDL--DYECLIEMGDAAYKWVQPE 166
            SLV +AISL P +A+ P LV I  D+      P P +     YE L+E GD A+ W +P+
Sbjct: 123  SLVNEAISLLPSSAKPPLLVLIADDDEVLPQQPSPTIHFYDTYEGLLEKGDPAFNWTRPK 182

Query: 167  SEWAPMVLNYTSGTTSSPKGVVHSHRGLYITSVDSLIEWSVPKQPVYMWTLPMFHANGWC 346
            +++ P+VLNYTSGTTSSPKGVVH HRGL+I ++DSL++WS PKQPV++WTLPMFH+NGW 
Sbjct: 183  NDFDPIVLNYTSGTTSSPKGVVHCHRGLFIVTLDSLVDWSFPKQPVFLWTLPMFHSNGWS 242

Query: 347  YSWAMAAVGGANVCLRRFDAAKLYGEIHKHGVTHMCGAPVVLNMLANAP-NPEPLLHPVH 523
            Y W MAAVGG N+CLR+FDA  +YG I KHGVTHMCGAPVVLNML+N+P   EPL +PVH
Sbjct: 243  YPWGMAAVGGTNICLRKFDAPTIYGLIKKHGVTHMCGAPVVLNMLSNSPITMEPLKNPVH 302

Query: 524  ILTAGAPPPAAVLMRTESLGFIVGHGYGLTETAGVVISCAWKREWNRFPASEQARLKARQ 703
            I+TAGAPPPA +L RTESLGF+VGHGYGLTET G+V+SCAWKR+WN FPA+E+ARLKARQ
Sbjct: 303  IITAGAPPPATILSRTESLGFVVGHGYGLTETGGIVVSCAWKRQWNLFPATERARLKARQ 362

Query: 704  GVRTNGMADMDVVDSESGISVKRDGQTLGEVVVRGACVMLGYLKDPIGTDKSMRENGWFY 883
            GVRT GM ++DVVD  +G+SVKRDG TLGE+V+RG C+MLGYLKDP+ T K M ENGWF 
Sbjct: 363  GVRTVGMTEVDVVDPVTGMSVKRDGLTLGEIVLRGGCIMLGYLKDPVATAKCMTENGWFC 422

Query: 884  TGDVGVMHPDGYMEIKDRSKDVIISGGENISSVEVESVLYLHPAINEAAVVARPDECWGE 1063
            TGDVGVMHPDGY+EIKDRSKDVIISGGEN+SSVEVESVLY  P INEAAVVARPDE WGE
Sbjct: 423  TGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVEVESVLYTFPDINEAAVVARPDEFWGE 482

Query: 1064 TPCAFVSLKPDSTK-PTDKEIMDFCRSQMPHYMAPKTVIFTTELPKSSTGKIHKFVLRER 1240
            TPCAFVSLK    + PT+KEI++ CR ++PHYM PKTV+   +LPK+STGKI K VLR+ 
Sbjct: 483  TPCAFVSLKEACCRIPTEKEIIEHCRGKLPHYMVPKTVVVKEKLPKTSTGKIQKAVLRDM 542

Query: 1241 AR 1246
            A+
Sbjct: 543  AK 544


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