BLASTX nr result

ID: Cimicifuga21_contig00019342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019342
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding prote...   237   3e-60
ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding prote...   233   5e-59
gb|AAZ94630.1| zinc finger protein-like protein [Gossypium hirsu...   219   7e-55
ref|XP_002304153.1| predicted protein [Populus trichocarpa] gi|2...   217   3e-54
ref|XP_002299606.1| predicted protein [Populus trichocarpa] gi|1...   217   3e-54

>ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|297743402|emb|CBI36269.3| unnamed protein
           product [Vitis vinifera]
          Length = 150

 Score =  237 bits (604), Expect = 3e-60
 Identities = 107/150 (71%), Positives = 115/150 (76%), Gaps = 5/150 (3%)
 Frame = -1

Query: 814 MSRPGDWNCRSCQHLNFSRRDSCQRCGDPXXXXXXXXXXXXXXXXXXXXXXXDVRPGDWY 635
           MSRPGDWNCRSCQH+NF RRDSCQRCGDP                       DVRPGDWY
Sbjct: 1   MSRPGDWNCRSCQHMNFQRRDSCQRCGDPKSGGGDFGSFGGRGGSSFGFTGSDVRPGDWY 60

Query: 634 CAAGNCGAHNFASRSSCFKCGAFKDESAGGFEGDMTRSRGF-----AGRSGWKSGDWICS 470
           C AGNCGAHNFASRS+CFKCGAFKDESAGG++ DM+RSRGF     +GRSGWKSGDWICS
Sbjct: 61  CNAGNCGAHNFASRSNCFKCGAFKDESAGGYDSDMSRSRGFGFGGGSGRSGWKSGDWICS 120

Query: 469 RPGCNEHNFASRMECFRCNAPRDSGSKSPY 380
           R GCNEHNFASRMECFRCNAPRD  +K+ Y
Sbjct: 121 RSGCNEHNFASRMECFRCNAPRDLSNKTSY 150


>ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|296082008|emb|CBI21013.3| unnamed protein
           product [Vitis vinifera]
          Length = 158

 Score =  233 bits (594), Expect = 5e-59
 Identities = 106/158 (67%), Positives = 115/158 (72%), Gaps = 11/158 (6%)
 Frame = -1

Query: 814 MSRPGDWNCRSCQHLNFSRRDSCQRCGDPXXXXXXXXXXXXXXXXXXXXXXXDVRPGDWY 635
           MSRPGDWNCRSCQ+LNF RRDSCQRCG+P                       DVRPGDWY
Sbjct: 1   MSRPGDWNCRSCQYLNFQRRDSCQRCGEPRPGDRGDYGGFSRGSSSFGFTGPDVRPGDWY 60

Query: 634 CAAGNCGAHNFASRSSCFKCGAFKDESAGGFEGDMTRSRGFA-----------GRSGWKS 488
           C  GNCGAHNFASRSSCFKCG  KDES+GG+EGDM+R RGF            GRSGWKS
Sbjct: 61  CTIGNCGAHNFASRSSCFKCGGLKDESSGGYEGDMSRPRGFGFGSGGSSGSGIGRSGWKS 120

Query: 487 GDWICSRPGCNEHNFASRMECFRCNAPRDSGSKSPYAT 374
           GDWIC+R GCNEHNFASRMECFRCNAPRDSG+KS Y++
Sbjct: 121 GDWICNRSGCNEHNFASRMECFRCNAPRDSGNKSSYSS 158


>gb|AAZ94630.1| zinc finger protein-like protein [Gossypium hirsutum]
          Length = 139

 Score =  219 bits (558), Expect = 7e-55
 Identities = 99/146 (67%), Positives = 110/146 (75%), Gaps = 1/146 (0%)
 Frame = -1

Query: 814 MSRPGDWNCRSCQHLNFSRRDSCQRCGDPXXXXXXXXXXXXXXXXXXXXXXXDVRPGDWY 635
           MSRPGDWNCRSCQHLNF RRD+CQRCG+                         VRPGDWY
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDNCQRCGESRYGVRVGSTFGFTAGSD-------VRPGDWY 53

Query: 634 CAAGNCGAHNFASRSSCFKCGAFKDESAGGFEGDMTRSRGFAG-RSGWKSGDWICSRPGC 458
           C AGNCG HNFASRS+CF CGAFKDESAGGF+ DM+RSRGF G RSGWKSGDWIC+R GC
Sbjct: 54  CTAGNCGTHNFASRSTCFNCGAFKDESAGGFDLDMSRSRGFGGNRSGWKSGDWICTRLGC 113

Query: 457 NEHNFASRMECFRCNAPRDSGSKSPY 380
           NEHNFASRMECFRC+APR+  +++ Y
Sbjct: 114 NEHNFASRMECFRCSAPREFNNRTSY 139


>ref|XP_002304153.1| predicted protein [Populus trichocarpa] gi|222841585|gb|EEE79132.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  217 bits (552), Expect = 3e-54
 Identities = 100/152 (65%), Positives = 110/152 (72%), Gaps = 7/152 (4%)
 Frame = -1

Query: 814 MSRPGDWNCRSCQHLNFSRRDSCQRCGDPXXXXXXXXXXXXXXXXXXXXXXXDVRPGDWY 635
           MSRPGDWNCRSCQHLNF RRDSCQRCGDP                        VRPGDWY
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDPRTGGDLGGFGARGGSAFGFTGSD-VRPGDWY 59

Query: 634 CAAGNCGAHNFASRSSCFKCGAFKD-ESAGGFEGDMTRSRGFAG------RSGWKSGDWI 476
           C AGNCGAHNFASRSSCFKCG +K+ +S+GGF+ D +RSRGF G      RSGWKSGDWI
Sbjct: 60  CTAGNCGAHNFASRSSCFKCGVYKEIDSSGGFDSDFSRSRGFGGSTGGSNRSGWKSGDWI 119

Query: 475 CSRPGCNEHNFASRMECFRCNAPRDSGSKSPY 380
           C+R GCNEHNFASRMECF+CNAPRD  + + Y
Sbjct: 120 CTRWGCNEHNFASRMECFKCNAPRDLSNTTSY 151


>ref|XP_002299606.1| predicted protein [Populus trichocarpa] gi|118483479|gb|ABK93638.1|
           unknown [Populus trichocarpa]
           gi|222846864|gb|EEE84411.1| predicted protein [Populus
           trichocarpa]
          Length = 151

 Score =  217 bits (552), Expect = 3e-54
 Identities = 99/152 (65%), Positives = 111/152 (73%), Gaps = 7/152 (4%)
 Frame = -1

Query: 814 MSRPGDWNCRSCQHLNFSRRDSCQRCGDPXXXXXXXXXXXXXXXXXXXXXXXDVRPGDWY 635
           M+RPGDWNCRSCQHLNF RRDSCQRCGDP                        VRPGDWY
Sbjct: 1   MNRPGDWNCRSCQHLNFQRRDSCQRCGDPRSAGDFGGFGGRGGSSLGFTGSD-VRPGDWY 59

Query: 634 CAAGNCGAHNFASRSSCFKCGAFKD-ESAGGFEGDMTRSRGFAG------RSGWKSGDWI 476
           C AGNCGAHNFASRSSCFKCG +K+ +SAGGF+ D +R+RGF G      RSGWKSGDWI
Sbjct: 60  CTAGNCGAHNFASRSSCFKCGVYKEMDSAGGFDSDFSRTRGFGGSTGGGNRSGWKSGDWI 119

Query: 475 CSRPGCNEHNFASRMECFRCNAPRDSGSKSPY 380
           C+R GCNEHNFASRMECF+CNAPRD  +++ Y
Sbjct: 120 CTRWGCNEHNFASRMECFKCNAPRDLSNRTSY 151


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