BLASTX nr result
ID: Cimicifuga21_contig00019342
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00019342 (907 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding prote... 237 3e-60 ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding prote... 233 5e-59 gb|AAZ94630.1| zinc finger protein-like protein [Gossypium hirsu... 219 7e-55 ref|XP_002304153.1| predicted protein [Populus trichocarpa] gi|2... 217 3e-54 ref|XP_002299606.1| predicted protein [Populus trichocarpa] gi|1... 217 3e-54 >ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis vinifera] gi|297743402|emb|CBI36269.3| unnamed protein product [Vitis vinifera] Length = 150 Score = 237 bits (604), Expect = 3e-60 Identities = 107/150 (71%), Positives = 115/150 (76%), Gaps = 5/150 (3%) Frame = -1 Query: 814 MSRPGDWNCRSCQHLNFSRRDSCQRCGDPXXXXXXXXXXXXXXXXXXXXXXXDVRPGDWY 635 MSRPGDWNCRSCQH+NF RRDSCQRCGDP DVRPGDWY Sbjct: 1 MSRPGDWNCRSCQHMNFQRRDSCQRCGDPKSGGGDFGSFGGRGGSSFGFTGSDVRPGDWY 60 Query: 634 CAAGNCGAHNFASRSSCFKCGAFKDESAGGFEGDMTRSRGF-----AGRSGWKSGDWICS 470 C AGNCGAHNFASRS+CFKCGAFKDESAGG++ DM+RSRGF +GRSGWKSGDWICS Sbjct: 61 CNAGNCGAHNFASRSNCFKCGAFKDESAGGYDSDMSRSRGFGFGGGSGRSGWKSGDWICS 120 Query: 469 RPGCNEHNFASRMECFRCNAPRDSGSKSPY 380 R GCNEHNFASRMECFRCNAPRD +K+ Y Sbjct: 121 RSGCNEHNFASRMECFRCNAPRDLSNKTSY 150 >ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis vinifera] gi|296082008|emb|CBI21013.3| unnamed protein product [Vitis vinifera] Length = 158 Score = 233 bits (594), Expect = 5e-59 Identities = 106/158 (67%), Positives = 115/158 (72%), Gaps = 11/158 (6%) Frame = -1 Query: 814 MSRPGDWNCRSCQHLNFSRRDSCQRCGDPXXXXXXXXXXXXXXXXXXXXXXXDVRPGDWY 635 MSRPGDWNCRSCQ+LNF RRDSCQRCG+P DVRPGDWY Sbjct: 1 MSRPGDWNCRSCQYLNFQRRDSCQRCGEPRPGDRGDYGGFSRGSSSFGFTGPDVRPGDWY 60 Query: 634 CAAGNCGAHNFASRSSCFKCGAFKDESAGGFEGDMTRSRGFA-----------GRSGWKS 488 C GNCGAHNFASRSSCFKCG KDES+GG+EGDM+R RGF GRSGWKS Sbjct: 61 CTIGNCGAHNFASRSSCFKCGGLKDESSGGYEGDMSRPRGFGFGSGGSSGSGIGRSGWKS 120 Query: 487 GDWICSRPGCNEHNFASRMECFRCNAPRDSGSKSPYAT 374 GDWIC+R GCNEHNFASRMECFRCNAPRDSG+KS Y++ Sbjct: 121 GDWICNRSGCNEHNFASRMECFRCNAPRDSGNKSSYSS 158 >gb|AAZ94630.1| zinc finger protein-like protein [Gossypium hirsutum] Length = 139 Score = 219 bits (558), Expect = 7e-55 Identities = 99/146 (67%), Positives = 110/146 (75%), Gaps = 1/146 (0%) Frame = -1 Query: 814 MSRPGDWNCRSCQHLNFSRRDSCQRCGDPXXXXXXXXXXXXXXXXXXXXXXXDVRPGDWY 635 MSRPGDWNCRSCQHLNF RRD+CQRCG+ VRPGDWY Sbjct: 1 MSRPGDWNCRSCQHLNFQRRDNCQRCGESRYGVRVGSTFGFTAGSD-------VRPGDWY 53 Query: 634 CAAGNCGAHNFASRSSCFKCGAFKDESAGGFEGDMTRSRGFAG-RSGWKSGDWICSRPGC 458 C AGNCG HNFASRS+CF CGAFKDESAGGF+ DM+RSRGF G RSGWKSGDWIC+R GC Sbjct: 54 CTAGNCGTHNFASRSTCFNCGAFKDESAGGFDLDMSRSRGFGGNRSGWKSGDWICTRLGC 113 Query: 457 NEHNFASRMECFRCNAPRDSGSKSPY 380 NEHNFASRMECFRC+APR+ +++ Y Sbjct: 114 NEHNFASRMECFRCSAPREFNNRTSY 139 >ref|XP_002304153.1| predicted protein [Populus trichocarpa] gi|222841585|gb|EEE79132.1| predicted protein [Populus trichocarpa] Length = 151 Score = 217 bits (552), Expect = 3e-54 Identities = 100/152 (65%), Positives = 110/152 (72%), Gaps = 7/152 (4%) Frame = -1 Query: 814 MSRPGDWNCRSCQHLNFSRRDSCQRCGDPXXXXXXXXXXXXXXXXXXXXXXXDVRPGDWY 635 MSRPGDWNCRSCQHLNF RRDSCQRCGDP VRPGDWY Sbjct: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDPRTGGDLGGFGARGGSAFGFTGSD-VRPGDWY 59 Query: 634 CAAGNCGAHNFASRSSCFKCGAFKD-ESAGGFEGDMTRSRGFAG------RSGWKSGDWI 476 C AGNCGAHNFASRSSCFKCG +K+ +S+GGF+ D +RSRGF G RSGWKSGDWI Sbjct: 60 CTAGNCGAHNFASRSSCFKCGVYKEIDSSGGFDSDFSRSRGFGGSTGGSNRSGWKSGDWI 119 Query: 475 CSRPGCNEHNFASRMECFRCNAPRDSGSKSPY 380 C+R GCNEHNFASRMECF+CNAPRD + + Y Sbjct: 120 CTRWGCNEHNFASRMECFKCNAPRDLSNTTSY 151 >ref|XP_002299606.1| predicted protein [Populus trichocarpa] gi|118483479|gb|ABK93638.1| unknown [Populus trichocarpa] gi|222846864|gb|EEE84411.1| predicted protein [Populus trichocarpa] Length = 151 Score = 217 bits (552), Expect = 3e-54 Identities = 99/152 (65%), Positives = 111/152 (73%), Gaps = 7/152 (4%) Frame = -1 Query: 814 MSRPGDWNCRSCQHLNFSRRDSCQRCGDPXXXXXXXXXXXXXXXXXXXXXXXDVRPGDWY 635 M+RPGDWNCRSCQHLNF RRDSCQRCGDP VRPGDWY Sbjct: 1 MNRPGDWNCRSCQHLNFQRRDSCQRCGDPRSAGDFGGFGGRGGSSLGFTGSD-VRPGDWY 59 Query: 634 CAAGNCGAHNFASRSSCFKCGAFKD-ESAGGFEGDMTRSRGFAG------RSGWKSGDWI 476 C AGNCGAHNFASRSSCFKCG +K+ +SAGGF+ D +R+RGF G RSGWKSGDWI Sbjct: 60 CTAGNCGAHNFASRSSCFKCGVYKEMDSAGGFDSDFSRTRGFGGSTGGGNRSGWKSGDWI 119 Query: 475 CSRPGCNEHNFASRMECFRCNAPRDSGSKSPY 380 C+R GCNEHNFASRMECF+CNAPRD +++ Y Sbjct: 120 CTRWGCNEHNFASRMECFKCNAPRDLSNRTSY 151