BLASTX nr result

ID: Cimicifuga21_contig00019339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019339
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation...    82   8e-14
ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation...    82   1e-13
ref|XP_004159873.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    81   2e-13
ref|XP_004146257.1| PREDICTED: eukaryotic translation initiation...    81   2e-13
ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|2...    80   5e-13

>ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 925

 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 13/170 (7%)
 Frame = +1

Query: 4    DFEAKNSALLCDVYHLAVLDMYNAS--LRSFNKFLDLAMLLNSSDQVRFWRAVAQLALCS 177
            D   K  A+LCD+YH A+LD ++ +  L   +   D    ++ S Q+ F RA++QL LC+
Sbjct: 505  DERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCA 564

Query: 178  HREGHEDEAYCLLCCLYGAGSLEDVLGKTVTH------IPLVDMM--KQHTPRHMHIDLG 333
             R G   EA+  L  LY  G ++++L + V+        P  + +  ++  P HMHI+L 
Sbjct: 565  FRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLE 624

Query: 334  LFQALKL--EWLADAPNMAGNIRCAVAKVTSLKFRSLFQLC-KSVNSGDP 474
            L +A+ L    L + PNMA N+  A  KV S  FR L ++  K   +G P
Sbjct: 625  LLEAVHLVSAMLLEVPNMAANVHDAKRKVISKTFRRLLEVSEKQTFTGPP 674


>ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 926

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 13/170 (7%)
 Frame = +1

Query: 4    DFEAKNSALLCDVYHLAVLDMYNAS--LRSFNKFLDLAMLLNSSDQVRFWRAVAQLALCS 177
            D   K  A+LCD+YH A+LD ++ +  L   +   D    ++ S Q+ F RA++QL LC+
Sbjct: 506  DERTKARAMLCDIYHHALLDEFSIARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCA 565

Query: 178  HREGHEDEAYCLLCCLYGAGSLEDVLGKTVTH------IPLVDMM--KQHTPRHMHIDLG 333
             R G   EA+  L  LY  G ++++L + V+        P  + +  ++  P HMHI+L 
Sbjct: 566  FRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLE 625

Query: 334  LFQALKL--EWLADAPNMAGNIRCAVAKVTSLKFRSLFQLC-KSVNSGDP 474
            L +A+ L    L + PNMA N+  A  KV S  FR L ++  K   +G P
Sbjct: 626  LLEAVHLVSAMLLEVPNMAANVHDAKRKVISKTFRRLLEVSEKQTFTGPP 675


>ref|XP_004159873.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit C-like [Cucumis sativus]
          Length = 939

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
 Frame = +1

Query: 4   DFEAKNSALLCDVYHLAVLDMYNAS--LRSFNKFLDLAMLLNSSDQVRFWRAVAQLALCS 177
           D   K  A+LCD+YH A+LD +  S  L   +   D    L+ S Q+ F RA+AQL LC 
Sbjct: 508 DERTKARAMLCDIYHHALLDEFYISRDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCG 567

Query: 178 HREGHEDEAYCLLCCLYGAGSLEDVLGKTVTH------IPLVDMM--KQHTPRHMHIDLG 333
            R G   E +  +  LY  G ++++L + V+        P  + +  ++  P HMHI+L 
Sbjct: 568 FRVGLISEGHGCVSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLE 627

Query: 334 LFQALKL--EWLADAPNMAGNIRCAVAKVTSLKFRSLFQL 447
           L +A+ L    L + PNMAGN+  +  KV S  FR L ++
Sbjct: 628 LLEAVHLISAMLLEVPNMAGNVHDSKRKVISKNFRRLLEV 667


>ref|XP_004146257.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Cucumis sativus]
          Length = 939

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
 Frame = +1

Query: 4   DFEAKNSALLCDVYHLAVLDMYNAS--LRSFNKFLDLAMLLNSSDQVRFWRAVAQLALCS 177
           D   K  A+LCD+YH A+LD +  S  L   +   D    L+ S Q+ F RA+AQL LC 
Sbjct: 508 DERTKARAMLCDIYHHALLDEFYISRDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCG 567

Query: 178 HREGHEDEAYCLLCCLYGAGSLEDVLGKTVTH------IPLVDMM--KQHTPRHMHIDLG 333
            R G   E +  +  LY  G ++++L + V+        P  + +  ++  P HMHI+L 
Sbjct: 568 FRVGLISEGHGCVSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLE 627

Query: 334 LFQALKL--EWLADAPNMAGNIRCAVAKVTSLKFRSLFQL 447
           L +A+ L    L + PNMAGN+  +  KV S  FR L ++
Sbjct: 628 LLEAVHLISAMLLEVPNMAGNVHDSKRKVISKNFRRLLEV 667


>ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|222867983|gb|EEF05114.1|
           predicted protein [Populus trichocarpa]
          Length = 895

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 12/160 (7%)
 Frame = +1

Query: 4   DFEAKNSALLCDVYHLAVLDMYNAS--LRSFNKFLDLAMLLNSSDQVRFWRAVAQLALCS 177
           D   K  A+LCD+YH A+LD  + S  L   +   D    ++ S Q+ F RA+AQL LC+
Sbjct: 485 DERTKARAMLCDIYHHALLDELSTSRDLLLMSHLQDNIQHMDISSQILFNRAMAQLGLCA 544

Query: 178 HREGHEDEAYCLLCCLYGAGSLEDVLGKTVTHIPLVDM--------MKQHTPRHMHIDLG 333
            R G   EA+  L  LY  G ++++L + V+     +          ++  P HMHI+L 
Sbjct: 545 FRVGMITEAHGCLFELYSGGRVKELLAQGVSQSRYHEKTQEQERLERRRQMPYHMHINLE 604

Query: 334 LFQALKL--EWLADAPNMAGNIRCAVAKVTSLKFRSLFQL 447
           L +++ L    L + PNMA NI  A  KV S  FR L ++
Sbjct: 605 LLESVHLICAMLLEVPNMAANIYDAKRKVISKTFRRLLEV 644


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