BLASTX nr result
ID: Cimicifuga21_contig00019339
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00019339 (716 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation... 82 8e-14 ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation... 82 1e-13 ref|XP_004159873.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t... 81 2e-13 ref|XP_004146257.1| PREDICTED: eukaryotic translation initiation... 81 2e-13 ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|2... 80 5e-13 >ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Glycine max] Length = 925 Score = 82.4 bits (202), Expect = 8e-14 Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 13/170 (7%) Frame = +1 Query: 4 DFEAKNSALLCDVYHLAVLDMYNAS--LRSFNKFLDLAMLLNSSDQVRFWRAVAQLALCS 177 D K A+LCD+YH A+LD ++ + L + D ++ S Q+ F RA++QL LC+ Sbjct: 505 DERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCA 564 Query: 178 HREGHEDEAYCLLCCLYGAGSLEDVLGKTVTH------IPLVDMM--KQHTPRHMHIDLG 333 R G EA+ L LY G ++++L + V+ P + + ++ P HMHI+L Sbjct: 565 FRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLE 624 Query: 334 LFQALKL--EWLADAPNMAGNIRCAVAKVTSLKFRSLFQLC-KSVNSGDP 474 L +A+ L L + PNMA N+ A KV S FR L ++ K +G P Sbjct: 625 LLEAVHLVSAMLLEVPNMAANVHDAKRKVISKTFRRLLEVSEKQTFTGPP 674 >ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Glycine max] Length = 926 Score = 82.0 bits (201), Expect = 1e-13 Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 13/170 (7%) Frame = +1 Query: 4 DFEAKNSALLCDVYHLAVLDMYNAS--LRSFNKFLDLAMLLNSSDQVRFWRAVAQLALCS 177 D K A+LCD+YH A+LD ++ + L + D ++ S Q+ F RA++QL LC+ Sbjct: 506 DERTKARAMLCDIYHHALLDEFSIARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCA 565 Query: 178 HREGHEDEAYCLLCCLYGAGSLEDVLGKTVTH------IPLVDMM--KQHTPRHMHIDLG 333 R G EA+ L LY G ++++L + V+ P + + ++ P HMHI+L Sbjct: 566 FRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLE 625 Query: 334 LFQALKL--EWLADAPNMAGNIRCAVAKVTSLKFRSLFQLC-KSVNSGDP 474 L +A+ L L + PNMA N+ A KV S FR L ++ K +G P Sbjct: 626 LLEAVHLVSAMLLEVPNMAANVHDAKRKVISKTFRRLLEVSEKQTFTGPP 675 >ref|XP_004159873.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit C-like [Cucumis sativus] Length = 939 Score = 81.3 bits (199), Expect = 2e-13 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 12/160 (7%) Frame = +1 Query: 4 DFEAKNSALLCDVYHLAVLDMYNAS--LRSFNKFLDLAMLLNSSDQVRFWRAVAQLALCS 177 D K A+LCD+YH A+LD + S L + D L+ S Q+ F RA+AQL LC Sbjct: 508 DERTKARAMLCDIYHHALLDEFYISRDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCG 567 Query: 178 HREGHEDEAYCLLCCLYGAGSLEDVLGKTVTH------IPLVDMM--KQHTPRHMHIDLG 333 R G E + + LY G ++++L + V+ P + + ++ P HMHI+L Sbjct: 568 FRVGLISEGHGCVSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLE 627 Query: 334 LFQALKL--EWLADAPNMAGNIRCAVAKVTSLKFRSLFQL 447 L +A+ L L + PNMAGN+ + KV S FR L ++ Sbjct: 628 LLEAVHLISAMLLEVPNMAGNVHDSKRKVISKNFRRLLEV 667 >ref|XP_004146257.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Cucumis sativus] Length = 939 Score = 81.3 bits (199), Expect = 2e-13 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 12/160 (7%) Frame = +1 Query: 4 DFEAKNSALLCDVYHLAVLDMYNAS--LRSFNKFLDLAMLLNSSDQVRFWRAVAQLALCS 177 D K A+LCD+YH A+LD + S L + D L+ S Q+ F RA+AQL LC Sbjct: 508 DERTKARAMLCDIYHHALLDEFYISRDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCG 567 Query: 178 HREGHEDEAYCLLCCLYGAGSLEDVLGKTVTH------IPLVDMM--KQHTPRHMHIDLG 333 R G E + + LY G ++++L + V+ P + + ++ P HMHI+L Sbjct: 568 FRVGLISEGHGCVSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLE 627 Query: 334 LFQALKL--EWLADAPNMAGNIRCAVAKVTSLKFRSLFQL 447 L +A+ L L + PNMAGN+ + KV S FR L ++ Sbjct: 628 LLEAVHLISAMLLEVPNMAGNVHDSKRKVISKNFRRLLEV 667 >ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|222867983|gb|EEF05114.1| predicted protein [Populus trichocarpa] Length = 895 Score = 79.7 bits (195), Expect = 5e-13 Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 12/160 (7%) Frame = +1 Query: 4 DFEAKNSALLCDVYHLAVLDMYNAS--LRSFNKFLDLAMLLNSSDQVRFWRAVAQLALCS 177 D K A+LCD+YH A+LD + S L + D ++ S Q+ F RA+AQL LC+ Sbjct: 485 DERTKARAMLCDIYHHALLDELSTSRDLLLMSHLQDNIQHMDISSQILFNRAMAQLGLCA 544 Query: 178 HREGHEDEAYCLLCCLYGAGSLEDVLGKTVTHIPLVDM--------MKQHTPRHMHIDLG 333 R G EA+ L LY G ++++L + V+ + ++ P HMHI+L Sbjct: 545 FRVGMITEAHGCLFELYSGGRVKELLAQGVSQSRYHEKTQEQERLERRRQMPYHMHINLE 604 Query: 334 LFQALKL--EWLADAPNMAGNIRCAVAKVTSLKFRSLFQL 447 L +++ L L + PNMA NI A KV S FR L ++ Sbjct: 605 LLESVHLICAMLLEVPNMAANIYDAKRKVISKTFRRLLEV 644