BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019325
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi...   114   3e-35
ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi...   114   1e-34
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...   115   2e-34
emb|CBI30973.3| unnamed protein product [Vitis vinifera]              114   5e-34
ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|2...   115   7e-34

>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  114 bits (286), Expect(2) = 3e-35
 Identities = 51/65 (78%), Positives = 58/65 (89%)
 Frame = -3

Query: 195 RKKMMGCGVQGDDYTFGILMKGLCLTNRIADGFKLLTLMKSRGITPNTVIYNTLIHALCK 16
           RK MM  GV+GDDYTFGILMKGLCLTNRI +GFKLL L+KSRG+ PNTV+YNTL+HALC+
Sbjct: 163 RKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCR 222

Query: 15  NGNVG 1
           NG VG
Sbjct: 223 NGKVG 227



 Score = 58.9 bits (141), Expect(2) = 3e-35
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = -2

Query: 292 EMPHSIGAPPDEDIFVTIVRGLGRARMNRKAIKEED 185
           EMPHS+GAPP +DIF+TI+RGLGRARM R  IK  D
Sbjct: 94  EMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLD 129


>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  114 bits (286), Expect(2) = 1e-34
 Identities = 55/65 (84%), Positives = 57/65 (87%)
 Frame = -3

Query: 195 RKKMMGCGVQGDDYTFGILMKGLCLTNRIADGFKLLTLMKSRGITPNTVIYNTLIHALCK 16
           RKKMM  GV GDDYTFGILMKGLCLTNRI D FKLL +MKSRG TPNTVIYNT+IHALCK
Sbjct: 221 RKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCK 280

Query: 15  NGNVG 1
           NG VG
Sbjct: 281 NGKVG 285



 Score = 56.6 bits (135), Expect(2) = 1e-34
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 292 EMPHSIGAPPDEDIFVTIVRGLGRARMNRKAIKEED 185
           EMP SIG+PPDE IFVTIVRGLGRARM R+ IK  D
Sbjct: 152 EMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLD 187


>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score =  115 bits (289), Expect(2) = 2e-34
 Identities = 52/65 (80%), Positives = 58/65 (89%)
 Frame = -3

Query: 195 RKKMMGCGVQGDDYTFGILMKGLCLTNRIADGFKLLTLMKSRGITPNTVIYNTLIHALCK 16
           RK+MMG GVQGDDYTF ILMKGLCLTNRI DGF+LL +MKSRG+ PN V+YNTL+HALCK
Sbjct: 166 RKQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCK 225

Query: 15  NGNVG 1
           NG VG
Sbjct: 226 NGKVG 230



 Score = 54.7 bits (130), Expect(2) = 2e-34
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = -2

Query: 292 EMPHSIGAPPDEDIFVTIVRGLGRARMNRKAIKEED 185
           EMPH+IG+PPDE+IF+T++RGLGRARM    IK  D
Sbjct: 97  EMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLD 132


>emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  114 bits (286), Expect(2) = 5e-34
 Identities = 55/65 (84%), Positives = 57/65 (87%)
 Frame = -3

Query: 195 RKKMMGCGVQGDDYTFGILMKGLCLTNRIADGFKLLTLMKSRGITPNTVIYNTLIHALCK 16
           RKKMM  GV GDDYTFGILMKGLCLTNRI D FKLL +MKSRG TPNTVIYNT+IHALCK
Sbjct: 69  RKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCK 128

Query: 15  NGNVG 1
           NG VG
Sbjct: 129 NGKVG 133



 Score = 54.7 bits (130), Expect(2) = 5e-34
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = -2

Query: 289 MPHSIGAPPDEDIFVTIVRGLGRARMNRKAIKEED 185
           MP SIG+PPDE IFVTIVRGLGRARM R+ IK  D
Sbjct: 1   MPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLD 35


>ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|222856668|gb|EEE94215.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  115 bits (287), Expect(2) = 7e-34
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = -3

Query: 204 KRLRKKMMGCGVQGDDYTFGILMKGLCLTNRIADGFKLLTLMKSRGITPNTVIYNTLIHA 25
           K  RKKMMG G+QGDDYT+GILMKGLCLTNRI +GFKLL ++KSRG+ PN VIYNTL+HA
Sbjct: 139 KFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHA 198

Query: 24  LCKNGNVG 1
           LC NG VG
Sbjct: 199 LCNNGKVG 206



 Score = 53.9 bits (128), Expect(2) = 7e-34
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -2

Query: 292 EMPHSIGAPPDEDIFVTIVRGLGRARMNRKAIKEED 185
           EMP SIG PPDE IF+TI+RGLGRARM R  IK  D
Sbjct: 73  EMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLD 108