BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019302
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containi...   268   1e-69
emb|CBI21839.3| unnamed protein product [Vitis vinifera]              268   1e-69
ref|XP_002517927.1| pentatricopeptide repeat-containing protein,...   256   3e-66
ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containi...   252   8e-65
ref|XP_002517929.1| pentatricopeptide repeat-containing protein,...   244   2e-62

>ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 461

 Score =  268 bits (684), Expect = 1e-69
 Identities = 128/233 (54%), Positives = 168/233 (72%), Gaps = 1/233 (0%)
 Frame = -1

Query: 696 LLKRVSRIHDPKASIIPVLDKWIDEGNTINKEKLHSIICTMRKFKRFHHALEISQWMTDR 517
           L  R+  + DPKASI P+L++WI+EG T++K +L S++  M+ F+RFHHALEISQWMTDR
Sbjct: 24  LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83

Query: 516 RYINLASSDVAVRLKLIYSVHGLEHVEKYFNNIPKHFKVAQTYGAILDCYVKEKFVDKAE 337
           RY  L  SD A+RL LI  VHG    E YFNNIP + K +  YGA+L  YV+EK V+KAE
Sbjct: 84  RYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAE 143

Query: 336 AVMKEMKTTGVEISSFPYNKLIDLYAQTGQQEKIDILLAEMEVKGIPQDKYTLANRLIGY 157
           A M++M+      SSFPYN LI+LY+QTG   KI+ L+ EM+ K IP D +T+ N ++ Y
Sbjct: 144 ATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAY 203

Query: 156 IAVSDIEGMENILNLM-KDPSICIDWSAYAVAATWYLKIGLIDKVLEMIKKVE 1
           +A SDI  ME  LN M +DP I +DW+ Y+VAA+ YLK+GLIDK LEM+KK+E
Sbjct: 204 VAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIE 256


>emb|CBI21839.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score =  268 bits (684), Expect = 1e-69
 Identities = 128/233 (54%), Positives = 168/233 (72%), Gaps = 1/233 (0%)
 Frame = -1

Query: 696 LLKRVSRIHDPKASIIPVLDKWIDEGNTINKEKLHSIICTMRKFKRFHHALEISQWMTDR 517
           L  R+  + DPKASI P+L++WI+EG T++K +L S++  M+ F+RFHHALEISQWMTDR
Sbjct: 24  LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDR 83

Query: 516 RYINLASSDVAVRLKLIYSVHGLEHVEKYFNNIPKHFKVAQTYGAILDCYVKEKFVDKAE 337
           RY  L  SD A+RL LI  VHG    E YFNNIP + K +  YGA+L  YV+EK V+KAE
Sbjct: 84  RYFTLTPSDAAIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAE 143

Query: 336 AVMKEMKTTGVEISSFPYNKLIDLYAQTGQQEKIDILLAEMEVKGIPQDKYTLANRLIGY 157
           A M++M+      SSFPYN LI+LY+QTG   KI+ L+ EM+ K IP D +T+ N ++ Y
Sbjct: 144 ATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAY 203

Query: 156 IAVSDIEGMENILNLM-KDPSICIDWSAYAVAATWYLKIGLIDKVLEMIKKVE 1
           +A SDI  ME  LN M +DP I +DW+ Y+VAA+ YLK+GLIDK LEM+KK+E
Sbjct: 204 VAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIE 256


>ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542909|gb|EEF44445.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  256 bits (655), Expect = 3e-66
 Identities = 133/252 (52%), Positives = 171/252 (67%), Gaps = 3/252 (1%)
 Frame = -1

Query: 747 LLFSTK--TLIXXXXXXXSLLKRVSRIHDPKASIIPVLDKWIDEGNTINKEKLHSIICTM 574
           L FST+  T          L  R+  + DPK SIIPVL++W+ EG+T+ K  L S++  M
Sbjct: 31  LFFSTRSQTQSSSSSESSKLYDRIQIVRDPKESIIPVLNQWVSEGHTVGKALLQSLVHLM 90

Query: 573 RKFKRFHHALEISQWMTDRRYINLASSDVAVRLKLIYSVHGLEHVEKYFNNIPKHFKVAQ 394
           + +KRF+HALE+S WMTD RY +L+ SDVAVRL+LIY V+G  H E YF  I    K   
Sbjct: 91  KGYKRFNHALEMSHWMTDCRYFSLSPSDVAVRLELIYRVYGSAHAEMYFEKISDKLKSGN 150

Query: 393 TYGAILDCYVKEKFVDKAEAVMKEMKTTGVEISSFPYNKLIDLYAQTGQQEKIDILLAEM 214
            YGA+L  YV+E  V KAEAV++EM+  G+  SSFPYN +I+LYAQ G  EKIDIL  EM
Sbjct: 151 VYGALLSGYVRENSVQKAEAVLQEMREKGIATSSFPYNIMINLYAQNGAFEKIDILKEEM 210

Query: 213 EVKGIPQDKYTLANRLIGYIAVSDIEGMENILN-LMKDPSICIDWSAYAVAATWYLKIGL 37
           E  GIPQDKYT+ N +  Y+A SDI GME ILN L   P +   W AY+VAA+ YLK+GL
Sbjct: 211 ERNGIPQDKYTMRNLMAAYVAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKVGL 270

Query: 36  IDKVLEMIKKVE 1
           I+K L+M++K+E
Sbjct: 271 IEKALKMLRKME 282


>ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
           gi|449479168|ref|XP_004155524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 500

 Score =  252 bits (643), Expect = 8e-65
 Identities = 120/233 (51%), Positives = 166/233 (71%), Gaps = 1/233 (0%)
 Frame = -1

Query: 696 LLKRVSRIHDPKASIIPVLDKWIDEGNTINKEKLHSIICTMRKFKRFHHALEISQWMTDR 517
           L +++  I  PK S++PVL+KW+ +G  I K +L  ++  M+  +RF+HALEISQWMTDR
Sbjct: 38  LRQKIVNIRAPKISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDR 97

Query: 516 RYINLASSDVAVRLKLIYSVHGLEHVEKYFNNIPKHFKVAQTYGAILDCYVKEKFVDKAE 337
           RY++L+ SD AVRL LI+SVHGLEH E YFN+I    K +  YGA+L CYV+EK ++KAE
Sbjct: 98  RYLSLSPSDAAVRLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAE 157

Query: 336 AVMKEMKTTGVEISSFPYNKLIDLYAQTGQQEKIDILLAEMEVKGIPQDKYTLANRLIGY 157
           A+M+EM+  G+  +SF YN LI+LYAQ GQ +KID+L+ EM+ KGIPQD Y++ N    Y
Sbjct: 158 AIMQEMRKMGIATTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAY 217

Query: 156 IAVSDIEGMENIL-NLMKDPSICIDWSAYAVAATWYLKIGLIDKVLEMIKKVE 1
           +A +DI GME IL  + +D  +  DW+ Y++AA  YL  GL  + L M+KK E
Sbjct: 218 VAKADISGMEKILKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTE 270


>ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542911|gb|EEF44447.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 446

 Score =  244 bits (622), Expect = 2e-62
 Identities = 116/230 (50%), Positives = 163/230 (70%), Gaps = 1/230 (0%)
 Frame = -1

Query: 687 RVSRIHDPKASIIPVLDKWIDEGNTINKEKLHSIICTMRKFKRFHHALEISQWMTDRRYI 508
           R+  + DPKAS+IPVLD+W++EGNT+ K  L S++  M+ F RF+HAL+ISQWM DR  +
Sbjct: 13  RIVNLKDPKASVIPVLDQWVNEGNTVRKALLRSLVNLMKGFNRFNHALQISQWMADRPNL 72

Query: 507 NLASSDVAVRLKLIYSVHGLEHVEKYFNNIPKHFKVAQTYGAILDCYVKEKFVDKAEAVM 328
            L+ SDV VRL+L++ ++G  H EKYF  +P  FK  + Y A+L  YV+E  V KAEA+M
Sbjct: 73  TLSPSDVVVRLELVHRIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQESSVRKAEAIM 132

Query: 327 KEMKTTGVEISSFPYNKLIDLYAQTGQQEKIDILLAEMEVKGIPQDKYTLANRLIGYIAV 148
           +EM+  G+  S FPYN LI+LY + G  EKI++L+ EME  G+ +  YT++N +  Y+A 
Sbjct: 133 EEMRAKGMANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLMAAYVAA 192

Query: 147 SDIEGMENILN-LMKDPSICIDWSAYAVAATWYLKIGLIDKVLEMIKKVE 1
           S+I GME ILN + KDP +  DW  Y+VAA+ YLK GLI+K L M++K+E
Sbjct: 193 SNISGMERILNQIEKDPQLGNDWRVYSVAASGYLKFGLIEKALTMLRKLE 242