BLASTX nr result

ID: Cimicifuga21_contig00019232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019232
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836076.1| ATP synthase CF0 subunit I [Megaleranthis sa...   223   2e-56
gb|AAZ03832.1| ATP synthase CF0 B chain [Ranunculus macranthus]       218   4e-55
ref|YP_001004172.1| ATP synthase CF0 subunit I [Ranunculus macra...   218   4e-55
ref|YP_001294170.1| ATP synthase CF0 subunit I [Buxus microphyll...   218   5e-55
ref|YP_740551.1| ATP synthase CF0 subunit I [Platanus occidental...   216   1e-54

>ref|YP_002836076.1| ATP synthase CF0 subunit I [Megaleranthis saniculifolia]
           gi|226933868|gb|ACO92001.1| ATP synthase CF0 subunit I
           [Megaleranthis saniculifolia]
          Length = 184

 Score =  223 bits (567), Expect = 2e-56
 Identities = 114/118 (96%), Positives = 116/118 (98%)
 Frame = +2

Query: 2   LSDLLDNRKQRILSTIRNSEELREGAIEKLEKATARLRKVKMEADEFRVNGYSEIEREKL 181
           LSDLLDNRKQRILSTIRNSEELREGAIEKLEKA ARLRKV+MEADEFRVNGYSEIEREK 
Sbjct: 49  LSDLLDNRKQRILSTIRNSEELREGAIEKLEKAKARLRKVQMEADEFRVNGYSEIEREKF 108

Query: 182 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHL 355
           NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRVFQQAL+GALGTLNSCLNNELHL
Sbjct: 109 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRVFQQALEGALGTLNSCLNNELHL 166


>gb|AAZ03832.1| ATP synthase CF0 B chain [Ranunculus macranthus]
          Length = 188

 Score =  218 bits (555), Expect = 4e-55
 Identities = 112/118 (94%), Positives = 113/118 (95%)
 Frame = +2

Query: 2   LSDLLDNRKQRILSTIRNSEELREGAIEKLEKATARLRKVKMEADEFRVNGYSEIEREKL 181
           LSDLLDNRKQRILSTIRNSEELR GAIEKLEKA ARLRKVK EADEFR NGYSEIEREK 
Sbjct: 54  LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVKAEADEFRTNGYSEIEREKC 113

Query: 182 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHL 355
           NLINSTYQNLERLENYKNETIQFEQQRAINQVRQR+FQQALQGALGTLNSCLNNELHL
Sbjct: 114 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRIFQQALQGALGTLNSCLNNELHL 171


>ref|YP_001004172.1| ATP synthase CF0 subunit I [Ranunculus macranthus]
           gi|226694449|sp|A1XGM4.1|ATPF_RANMC RecName: Full=ATP
           synthase subunit b, chloroplastic; AltName: Full=ATP
           synthase F(0) sector subunit b; AltName: Full=ATPase
           subunit I gi|85540790|gb|ABC70742.1| ATP synthase CF0
           subunit I [Ranunculus macranthus]
          Length = 183

 Score =  218 bits (555), Expect = 4e-55
 Identities = 112/118 (94%), Positives = 113/118 (95%)
 Frame = +2

Query: 2   LSDLLDNRKQRILSTIRNSEELREGAIEKLEKATARLRKVKMEADEFRVNGYSEIEREKL 181
           LSDLLDNRKQRILSTIRNSEELR GAIEKLEKA ARLRKVK EADEFR NGYSEIEREK 
Sbjct: 49  LSDLLDNRKQRILSTIRNSEELRGGAIEKLEKAKARLRKVKAEADEFRTNGYSEIEREKC 108

Query: 182 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHL 355
           NLINSTYQNLERLENYKNETIQFEQQRAINQVRQR+FQQALQGALGTLNSCLNNELHL
Sbjct: 109 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRIFQQALQGALGTLNSCLNNELHL 166


>ref|YP_001294170.1| ATP synthase CF0 subunit I [Buxus microphylla]
           gi|226741352|sp|A6MM22.1|ATPF_BUXMI RecName: Full=ATP
           synthase subunit b, chloroplastic; AltName: Full=ATP
           synthase F(0) sector subunit b; AltName: Full=ATPase
           subunit I gi|146762271|gb|ABQ45235.1| ATP synthase CF0
           subunit I [Buxus microphylla]
          Length = 184

 Score =  218 bits (554), Expect = 5e-55
 Identities = 112/118 (94%), Positives = 115/118 (97%)
 Frame = +2

Query: 2   LSDLLDNRKQRILSTIRNSEELREGAIEKLEKATARLRKVKMEADEFRVNGYSEIEREKL 181
           LSDLLDNRKQRILSTIRNSEELR GAIE+LEKA ARLRKV+MEADEFRVNGYSEIEREKL
Sbjct: 49  LSDLLDNRKQRILSTIRNSEELRVGAIEQLEKARARLRKVEMEADEFRVNGYSEIEREKL 108

Query: 182 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHL 355
           NLINSTY+NLERLENYKNETI FEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHL
Sbjct: 109 NLINSTYKNLERLENYKNETIHFEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHL 166


>ref|YP_740551.1| ATP synthase CF0 subunit I [Platanus occidentalis]
           gi|122166049|sp|Q09G60.1|ATPF_PLAOC RecName: Full=ATP
           synthase subunit b, chloroplastic; AltName: Full=ATP
           synthase F(0) sector subunit b; AltName: Full=ATPase
           subunit I gi|114054370|gb|ABI49764.1| ATP synthase CF0
           subunit I [Platanus occidentalis]
          Length = 184

 Score =  216 bits (551), Expect = 1e-54
 Identities = 112/118 (94%), Positives = 115/118 (97%)
 Frame = +2

Query: 2   LSDLLDNRKQRILSTIRNSEELREGAIEKLEKATARLRKVKMEADEFRVNGYSEIEREKL 181
           LSDLLDNRKQRILSTIRNSEELR GAIE+LEKA ARLRKV+MEADEFRVNGYSEIEREKL
Sbjct: 49  LSDLLDNRKQRILSTIRNSEELRGGAIEQLEKARARLRKVEMEADEFRVNGYSEIEREKL 108

Query: 182 NLINSTYQNLERLENYKNETIQFEQQRAINQVRQRVFQQALQGALGTLNSCLNNELHL 355
           NLINSTY+NLERLENYKNETIQFEQQRAINQVRQRVFQQALQ ALGTLNSCLNNELHL
Sbjct: 109 NLINSTYKNLERLENYKNETIQFEQQRAINQVRQRVFQQALQRALGTLNSCLNNELHL 166


Top