BLASTX nr result

ID: Cimicifuga21_contig00019230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019230
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28442.3| unnamed protein product [Vitis vinifera]              100   1e-19
gb|ACC60967.1| phytochrome C [Vitis vinifera]                         100   1e-19
ref|XP_002268724.1| PREDICTED: phytochrome C [Vitis vinifera]         100   1e-19
gb|ACC60971.1| phytochrome C [Vitis riparia]                           99   3e-19
gb|AAC49301.2| phytochrome F [Solanum lycopersicum]                    94   9e-18

>emb|CBI28442.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/59 (81%), Positives = 55/59 (93%)
 Frame = -2

Query: 347  GIPGALIQEMFHHSKGVSREGLGLYINQKLVKIMNGSVQYLREAERSSFIILVEFPMVN 171
            GIP  LIQ+MFHHS+GVSREGLGLYINQKLVKIMNG+VQYLREA+ SSFIIL+EFP+ +
Sbjct: 857  GIPEDLIQQMFHHSQGVSREGLGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPLAH 915


>gb|ACC60967.1| phytochrome C [Vitis vinifera]
          Length = 1118

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/59 (81%), Positives = 55/59 (93%)
 Frame = -2

Query: 347  GIPGALIQEMFHHSKGVSREGLGLYINQKLVKIMNGSVQYLREAERSSFIILVEFPMVN 171
            GIP  LIQ+MFHHS+GVSREGLGLYINQKLVKIMNG+VQYLREA+ SSFIIL+EFP+ +
Sbjct: 1060 GIPEDLIQQMFHHSQGVSREGLGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPLAH 1118


>ref|XP_002268724.1| PREDICTED: phytochrome C [Vitis vinifera]
          Length = 1118

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/59 (81%), Positives = 55/59 (93%)
 Frame = -2

Query: 347  GIPGALIQEMFHHSKGVSREGLGLYINQKLVKIMNGSVQYLREAERSSFIILVEFPMVN 171
            GIP  LIQ+MFHHS+GVSREGLGLYINQKLVKIMNG+VQYLREA+ SSFIIL+EFP+ +
Sbjct: 1060 GIPEDLIQQMFHHSQGVSREGLGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPLAH 1118


>gb|ACC60971.1| phytochrome C [Vitis riparia]
          Length = 1123

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = -2

Query: 347  GIPGALIQEMFHHSKGVSREGLGLYINQKLVKIMNGSVQYLREAERSSFIILVEFPMVNR 168
            GIP  LIQ+MFHH +GVSREGLGLYINQKLVKIMNG+VQYLREA+ SSFIIL+EFP+ ++
Sbjct: 1060 GIPEDLIQQMFHHRQGVSREGLGLYINQKLVKIMNGTVQYLREAQGSSFIILIEFPLAHQ 1119


>gb|AAC49301.2| phytochrome F [Solanum lycopersicum]
          Length = 1118

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/60 (73%), Positives = 54/60 (90%)
 Frame = -2

Query: 347  GIPGALIQEMFHHSKGVSREGLGLYINQKLVKIMNGSVQYLREAERSSFIILVEFPMVNR 168
            GIP  LIQ MFH+S+ +SREG GLYI+QKLVKIM+G+VQYLREA+RSSFIILVEFP++ +
Sbjct: 1056 GIPDDLIQHMFHYSRSISREGFGLYISQKLVKIMDGTVQYLREADRSSFIILVEFPLMEK 1115


Top