BLASTX nr result

ID: Cimicifuga21_contig00019220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019220
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-a...    60   2e-07
emb|CBI40185.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-a...    57   1e-06
ref|XP_002531133.1| WD-repeat protein, putative [Ricinus communi...    56   3e-06
ref|XP_004174196.1| PREDICTED: probable U3 small nucleolar RNA-a...    55   4e-06

>ref|XP_002269978.2| PREDICTED: probable U3 small nucleolar RNA-associated protein 7
           [Vitis vinifera]
          Length = 610

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +2

Query: 233 HRYGTEVILLIM*EHGNVLRLQFLKNHFLLASINENGRLHYQDV 364
           +R GTE+  L   EHG+VL+LQFLKNHFLLASIN+ G+LHYQDV
Sbjct: 258 NRDGTELHCLK--EHGSVLKLQFLKNHFLLASINKFGQLHYQDV 299


>emb|CBI40185.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +2

Query: 233 HRYGTEVILLIM*EHGNVLRLQFLKNHFLLASINENGRLHYQDV 364
           +R GTE+  L   EHG+VL+LQFLKNHFLLASIN+ G+LHYQDV
Sbjct: 184 NRDGTELHCLK--EHGSVLKLQFLKNHFLLASINKFGQLHYQDV 225


>ref|XP_004138833.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like [Cucumis sativus]
           gi|449528879|ref|XP_004171429.1| PREDICTED: probable U3
           small nucleolar RNA-associated protein 7-like [Cucumis
           sativus]
          Length = 536

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/44 (68%), Positives = 35/44 (79%)
 Frame = +2

Query: 233 HRYGTEVILLIM*EHGNVLRLQFLKNHFLLASINENGRLHYQDV 364
           +R GTE+  L   EHG+V RLQFLKNHFLL SIN+ G+LHYQDV
Sbjct: 184 NREGTELHCLK--EHGSVRRLQFLKNHFLLVSINKFGQLHYQDV 225


>ref|XP_002531133.1| WD-repeat protein, putative [Ricinus communis]
           gi|223529282|gb|EEF31253.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 526

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +2

Query: 233 HRYGTEVILLIM*EHGNVLRLQFLKNHFLLASINENGRLHYQDV 364
           +R GTE+  L    HG VLRLQFL+NHFLLASIN+ G+LHYQD+
Sbjct: 173 YRDGTELHCLE--GHGAVLRLQFLRNHFLLASINKLGQLHYQDI 214


>ref|XP_004174196.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           7-like, partial [Cucumis sativus]
          Length = 236

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 272 EHGNVLRLQFLKNHFLLASINENGRLHYQDV 364
           EHG+V RLQFLKNHFLL SIN+ G+LHYQDV
Sbjct: 1   EHGSVRRLQFLKNHFLLVSINKFGQLHYQDV 31


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