BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019216
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17838.1| unknown [Picea sitchensis]                             160   1e-37
ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...   139   3e-31
gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygr...   138   5e-31
ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30

>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/161 (47%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
 Frame = -3

Query: 488 MLITGIKPNSFTMATILPSFSYT---EGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCGS 318
           M + GIKPNS TM ++LP+ ++    E   QIH + I+ GF+S+  V  ALV++YAKCG+
Sbjct: 313 MQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGN 372

Query: 317 IFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTALH 138
           + SA ++F  MP++NVV+WNA+I GY+Q+G   E+L LF +M + G ++PDSF++V+ L 
Sbjct: 373 VNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQG-IKPDSFAIVSVLP 431

Query: 137 SCSVLTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCG 15
           +C+   AL  G++IHG+  + G E NV VG GLVD+Y KCG
Sbjct: 432 ACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCG 472



 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/162 (44%), Positives = 108/162 (66%), Gaps = 3/162 (1%)
 Frame = -3

Query: 491 EMLITGIKPNSFTMATILPSFSYT---EGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCG 321
           EM + GIKPNS T+ +++P  ++    E   QIH + I+ G +SDV V+  LV++YAKCG
Sbjct: 211 EMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCG 270

Query: 320 SIFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTAL 141
           ++ +A ++F  MP R+V SWNA+I GY+ N    E+L  F +M   G ++P+S ++V+ L
Sbjct: 271 NVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG-IKPNSITMVSVL 329

Query: 140 HSCSVLTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCG 15
            +C+ L AL  G++IHG+A + G E N  VGN LV+MY KCG
Sbjct: 330 PACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCG 371



 Score =  144 bits (363), Expect = 7e-33
 Identities = 73/162 (45%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
 Frame = -3

Query: 491 EMLITGIKPNSFTMATILP---SFSYTEGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCG 321
           +M  TGI P+     +++    S S  +   ++H  +I  GF+SDV V TAL  +Y KCG
Sbjct: 110 QMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCG 169

Query: 320 SIFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTAL 141
           S+ +A+QVF+ MP+R+VVSWNA+I GY+QNG   E+L LF++M  NG ++P+S ++V+ +
Sbjct: 170 SLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNG-IKPNSSTLVSVM 228

Query: 140 HSCSVLTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCG 15
             C+ L AL  G++IH +A + G+E +V V NGLV+MY KCG
Sbjct: 229 PVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCG 270



 Score =  109 bits (273), Expect = 2e-22
 Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 4/166 (2%)
 Frame = -3

Query: 491 EMLITGIKPNSFTMATILPS---FSYTEGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCG 321
           EM   GIKP+SF + ++LP+   F   E   QIH + I+ GF+S+V V T LVD+YAKCG
Sbjct: 413 EMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCG 472

Query: 320 SIFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTAL 141
           ++ +AQ++F  MPE++VVSW  MIL Y  +G  +++L LF+KM   G  + D  +    L
Sbjct: 473 NVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETG-TKLDHIAFTAIL 531

Query: 140 HSCSVLTALNSG-EEIHGFAYKVGLERNVFVGNGLVDMYGKCGVLE 6
            +CS    ++ G +         GL   +     LVD+ G+ G L+
Sbjct: 532 TACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLD 577



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/90 (34%), Positives = 48/90 (53%)
 Frame = -3

Query: 275 NVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTALHSCSVLTALNSGEEI 96
           N V W   I+GY +NG   ++L+L+ +M   G + PD    ++ + +C   + L +G ++
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTG-INPDKLVFLSVIKACGSQSDLQAGRKV 142

Query: 95  HGFAYKVGLERNVFVGNGLVDMYGKCGVLE 6
           H      G E +V VG  L  MY KCG LE
Sbjct: 143 HEDIIARGFESDVIVGTALASMYTKCGSLE 172


>ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  139 bits (350), Expect = 2e-31
 Identities = 76/165 (46%), Positives = 109/165 (66%), Gaps = 4/165 (2%)
 Frame = -3

Query: 488 MLITGIKPNSFTMATILPSFSY----TEGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCG 321
           M  TGI PN FT + ILP+ ++    +EG  QIH+ + KH F +D FV TAL+D+YAKCG
Sbjct: 191 MRTTGIYPNHFTFSAILPACAHAALLSEGQ-QIHALIHKHCFLNDPFVATALLDMYAKCG 249

Query: 320 SIFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTAL 141
           S+  A+ VF+EMP RN+VSWN+MI+G+ +N     ++ +F ++ S G   PD  S+ + L
Sbjct: 250 SMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG---PDQVSISSVL 306

Query: 140 HSCSVLTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCGVLE 6
            +C+ L  L+ G+++HG   K GL   V+V N LVDMY KCG+ E
Sbjct: 307 SACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFE 351



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/131 (35%), Positives = 71/131 (54%)
 Frame = -3

Query: 407 QIHSFLIKHGFDSDVFVLTALVDVYAKCGSIFSAQQVFNEMPERNVVSWNAMILGYNQNG 228
           Q+H  ++K G    V+V  +LVD+Y KCG    A ++F    +R+VV+WN MI+G  +  
Sbjct: 320 QVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCR 379

Query: 227 DAQESLKLFAKMWSNGDVRPDSFSVVTALHSCSVLTALNSGEEIHGFAYKVGLERNVFVG 48
           + +++   F  M   G V PD  S  +  H+ + + AL  G  IH    K G  +N  + 
Sbjct: 380 NFEQACTYFQAMIREG-VEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRIS 438

Query: 47  NGLVDMYGKCG 15
           + LV MYGKCG
Sbjct: 439 SSLVTMYGKCG 449



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
 Frame = -3

Query: 488 MLITGIKPNSFTMATILPSFS----YTEGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCG 321
           M+  G++P+  + +++  + +     T+G++ IHS ++K G   +  + ++LV +Y KCG
Sbjct: 391 MIREGVEPDEASYSSLFHASASIAALTQGTM-IHSHVLKTGHVKNSRISSSLVTMYGKCG 449

Query: 320 SIFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTAL 141
           S+  A QVF E  E NVV W AMI  ++Q+G A E++KLF +M + G V P+  + V+ L
Sbjct: 450 SMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEG-VVPEYITFVSVL 508

Query: 140 HSCSVLTALNSGEEIHGFAY----------KVGLERNVFVGNGLVDMYGKCGVLE 6
            +CS     ++G+   GF Y          K GLE        +VD+ G+ G LE
Sbjct: 509 SACS-----HTGKIDDGFKYFNSMANVHNIKPGLEHYAC----MVDLLGRVGRLE 554



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
 Frame = -3

Query: 407 QIHSFLIKHGFDSDVFVLTALVDVYAKCGSIFSAQQVFNEMPE--RNVVSWNAMILGYNQ 234
           QIHS L+     + +  +  L+ +YAKCGSI     +FN  P    NVV+W  +I   ++
Sbjct: 118 QIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSR 177

Query: 233 NGDAQESLKLFAKMWSNGDVRPDSFSVVTALHSCSVLTALNSGEEIHGFAYKVGLERNVF 54
           +    ++L  F +M + G + P+ F+    L +C+    L+ G++IH   +K     + F
Sbjct: 178 SNKPFQALTFFNRMRTTG-IYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPF 236

Query: 53  VGNGLVDMYGKCGVLEL 3
           V   L+DMY KCG + L
Sbjct: 237 VATALLDMYAKCGSMLL 253


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/160 (44%), Positives = 107/160 (66%), Gaps = 3/160 (1%)
 Frame = -3

Query: 476 GIKPNSFTMATILPSFSYT---EGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCGSIFSA 306
           G  PN+FT   +L + +     +  ++IH+ ++K GFD DVFV T+LV +YAKCG +  A
Sbjct: 107 GFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDA 166

Query: 305 QQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTALHSCSV 126
            +VF+++P++NVVSW A+I GY   G  +E++ +F ++    ++ PDSF++V  L +C+ 
Sbjct: 167 HKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEM-NLAPDSFTIVRVLSACTQ 225

Query: 125 LTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCGVLE 6
           L  LNSGE IH    ++G+ RNVFVG  LVDMY KCG +E
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNME 265



 Score =  114 bits (284), Expect = 1e-23
 Identities = 63/162 (38%), Positives = 99/162 (61%), Gaps = 4/162 (2%)
 Frame = -3

Query: 488 MLITGIKPNSFTMATILPSFSYTEGSIQ----IHSFLIKHGFDSDVFVLTALVDVYAKCG 321
           +L   + P+SFT+  +L + +   G +     IH  +++ G   +VFV T+LVD+YAKCG
Sbjct: 204 LLEMNLAPDSFTIVRVLSACTQL-GDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCG 262

Query: 320 SIFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTAL 141
           ++  A+ VF+ MPE+++VSW AMI GY  NG  +E++ LF +M    +V+PD ++VV  L
Sbjct: 263 NMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQM-QRENVKPDCYTVVGVL 321

Query: 140 HSCSVLTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCG 15
            +C+ L AL  GE + G   +     N  +G  L+D+Y KCG
Sbjct: 322 SACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCG 363



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 46/167 (27%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
 Frame = -3

Query: 491 EMLITGIKPNSFTMATILPSFSYTEGSIQIHSFLI----KHGFDSDVFVLTALVDVYAKC 324
           +M    +KP+ +T+  +L + +   G++++  ++     ++ F  +  + TAL+D+YAKC
Sbjct: 304 QMQRENVKPDCYTVVGVLSACARL-GALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKC 362

Query: 323 GSIFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTA 144
           GS+  A +VF  M E++ V WNA+I G   NG  + S  LF ++   G ++PD  + +  
Sbjct: 363 GSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLG-IKPDGNTFIGL 421

Query: 143 LHSCSVLTALNSGEEIHGFAYK-VGLERNVFVGNGLVDMYGKCGVLE 6
           L  C+    ++ G       Y+   L  ++     +VD+ G+ G+L+
Sbjct: 422 LCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLD 468


>gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  138 bits (347), Expect = 5e-31
 Identities = 74/164 (45%), Positives = 106/164 (64%), Gaps = 3/164 (1%)
 Frame = -3

Query: 491 EMLITGIKPNSFTMATILPSFSYT---EGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCG 321
           +M   G+KPN  T  +IL +       E   QIHS + K G++SDV V TAL+++Y KCG
Sbjct: 191 QMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCG 250

Query: 320 SIFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTAL 141
           S+  A++VFNEM ERNVVSW AMI GY Q+GD++E+L LF K+  +G ++P+  S  + L
Sbjct: 251 SLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSG-IQPNKVSFASIL 309

Query: 140 HSCSVLTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCGVL 9
            +C+    L  G ++H +  + GLE+ V VGN L+ MY +CG L
Sbjct: 310 GACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSL 353



 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
 Frame = -3

Query: 476  GIKPNSFTMATILPSFSYTE---GSIQIHSFLIKHGFDSDVFVLTALVDVYAKCGSIFSA 306
            G K + +T   +L + +  E       IH  + K GF  D+ VLT L+ +Y+KCGS+  A
Sbjct: 599  GGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDA 658

Query: 305  QQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTALHSCSV 126
            + VF+ + E++VV WNAM+  Y  +   Q++LKLF +M   G V PDS +  TAL++C+ 
Sbjct: 659  ENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEG-VNPDSSTYSTALNACAR 717

Query: 125  LTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCGVL 9
            LTA+  G++IH    + G+E +  V N L++MY +CG L
Sbjct: 718  LTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCL 756



 Score =  112 bits (281), Expect = 2e-23
 Identities = 62/159 (38%), Positives = 94/159 (59%), Gaps = 3/159 (1%)
 Frame = -3

Query: 476 GIKPNSFTMATILP---SFSYTEGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCGSIFSA 306
           G +P+ FT A++L      +  +   ++HS +   G+ +D+ V TAL+ +YAKCGS   A
Sbjct: 397 GFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEA 456

Query: 305 QQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTALHSCSV 126
           ++VFN+MPERNV+SWNA I    ++   +E+ + F +M    DV PD  + +T L+SC+ 
Sbjct: 457 RKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQM-RRDDVNPDHITFITLLNSCTS 515

Query: 125 LTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCGVL 9
              L  G  IHG   + G+  N  V N L+ MYG+CG L
Sbjct: 516 PEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNL 554



 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/142 (40%), Positives = 83/142 (58%)
 Frame = -3

Query: 428 SYTEGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCGSIFSAQQVFNEMPERNVVSWNAMI 249
           S  EG  ++H  +    F  D+++   L+ +Y+KCGSI  A  VF  M +++VVSWNAMI
Sbjct: 115 SLAEGK-KVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMI 173

Query: 248 LGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTALHSCSVLTALNSGEEIHGFAYKVGL 69
            GY  +G  QE+  LF +M   G ++P+  + ++ L +C    AL  GE+IH    K G 
Sbjct: 174 SGYALHGRDQEAADLFYQMQREG-LKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGY 232

Query: 68  ERNVFVGNGLVDMYGKCGVLEL 3
           E +V V   L++MY KCG LEL
Sbjct: 233 ESDVNVSTALINMYCKCGSLEL 254



 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/162 (32%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
 Frame = -3

Query: 491 EMLITGIKPNSFTMATILPSFSYTEG---SIQIHSFLIKHGFDSDVFVLTALVDVYAKCG 321
           +++ +GI+PN  + A+IL + +        +++H+++ + G + +V V  AL+ +Y++CG
Sbjct: 292 KLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCG 351

Query: 320 SIFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTAL 141
           S+ +A+QVF+ +   N  +WNAMI GY + G  +E+ +LF  M   G  +PD F+  + L
Sbjct: 352 SLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKG-FQPDKFTYASLL 409

Query: 140 HSCSVLTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCG 15
             C+    L+ G+E+H      G + ++ V   L+ MY KCG
Sbjct: 410 AICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCG 451



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
 Frame = -3

Query: 473 IKPNSFTMATILPSFSYTEGSIQ---IHSFLIKHGFDSDVFVLTALVDVYAKCGSIFSAQ 303
           + P+  T  T+L S +  E   +   IH  + + G  S+  V  AL+ +Y +CG++  A+
Sbjct: 499 VNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAR 558

Query: 302 QVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTALHSCSVL 123
           +VF  +  R++ SWNAMI    Q+G    +  LF K  S G  + D ++ +  L + + L
Sbjct: 559 EVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGG-KGDKYTFINVLRAVANL 617

Query: 122 TALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKCGVL 9
             L++G  IHG   K G  +++ V   L+ MY KCG L
Sbjct: 618 EDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSL 655



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/146 (30%), Positives = 82/146 (56%), Gaps = 3/146 (2%)
 Frame = -3

Query: 491  EMLITGIKPNSFTMATILPS---FSYTEGSIQIHSFLIKHGFDSDVFVLTALVDVYAKCG 321
            +M + G+ P+S T +T L +    +  E   +IH+ L + G ++D  V  +L+++Y++CG
Sbjct: 695  QMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCG 754

Query: 320  SIFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTAL 141
             + SA+QVF +M  R++ SWNA+I GY QNG    +L+ + ++     + P+  +  + L
Sbjct: 755  CLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYY-ELMLRASIVPNKATFTSIL 813

Query: 140  HSCSVLTALNSGEEIHGFAYKVGLER 63
             S + L     GEE   F +   +++
Sbjct: 814  SSYAQL-----GEEEQAFDFLESIKK 834


>ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/156 (44%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
 Frame = -3

Query: 476 GIKPNSFTMATILPSFSYTEG---SIQIHSFLIKHGFDSDVFVLTALVDVYAKCGSIFSA 306
           G +P++ T+ ++LP+ +  +      ++H+F ++ GFD  V V TA++DVY KCG++ SA
Sbjct: 322 GERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSA 381

Query: 305 QQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTALHSCSV 126
           ++VF+ M +RN VSWNAMI GY +NGDA E+L LF +M   G V     SV+ ALH+C  
Sbjct: 382 RKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEG-VDVTDVSVLAALHACGE 440

Query: 125 LTALNSGEEIHGFAYKVGLERNVFVGNGLVDMYGKC 18
           L  L+ G  +H    ++GLE NV V N L+ MY KC
Sbjct: 441 LGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKC 476



 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/164 (35%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
 Frame = -3

Query: 488  MLITGIKPNSFTMATILPSFSYTEGSIQ---IHSFLIKHGFDSDVFVLTALVDVYAKCGS 318
            M +  +KP+SFT+ +I+P+ +     +Q   IH + I+   D DV+VLTAL+D+YAKCG 
Sbjct: 520  MQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 579

Query: 317  IFSAQQVFNEMPERNVVSWNAMILGYNQNGDAQESLKLFAKMWSNGDVRPDSFSVVTALH 138
            +  A+ +FN   +R+V++WNAMI GY  +G  + +++LF +M S+G V P+  + ++ L 
Sbjct: 580  VSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKV-PNETTFLSVLS 638

Query: 137  SCSVLTALNSGEE-IHGFAYKVGLERNVFVGNGLVDMYGKCGVL 9
            +CS    ++ G+E         GLE  +     +VD+ G+ G L
Sbjct: 639  ACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKL 682



 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/131 (38%), Positives = 89/131 (67%)
 Frame = -3

Query: 407 QIHSFLIKHGFDSDVFVLTALVDVYAKCGSIFSAQQVFNEMPERNVVSWNAMILGYNQNG 228
           ++H  L++ G +S+V V+ AL+ +Y KC     A QVF+E+  +  VSWNAMILG  QNG
Sbjct: 449 RVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNG 508

Query: 227 DAQESLKLFAKMWSNGDVRPDSFSVVTALHSCSVLTALNSGEEIHGFAYKVGLERNVFVG 48
            ++++++LF++M    +V+PDSF++V+ + + + ++       IHG++ ++ L+++V+V 
Sbjct: 509 SSEDAVRLFSRMQLE-NVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVL 567

Query: 47  NGLVDMYGKCG 15
             L+DMY KCG
Sbjct: 568 TALIDMYAKCG 578



 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/133 (34%), Positives = 79/133 (59%)
 Frame = -3

Query: 404 IHSFLIKHGFDSDVFVLTALVDVYAKCGSIFSAQQVFNEMPERNVVSWNAMILGYNQNGD 225
           +H+ L   G   +    TAL ++YAKC     A++VF+ MP R+ V+WNA++ GY +NG 
Sbjct: 247 VHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGL 306

Query: 224 AQESLKLFAKMWSNGDVRPDSFSVVTALHSCSVLTALNSGEEIHGFAYKVGLERNVFVGN 45
           A+ ++ +  +M      RPD+ ++V+ L +C+   AL +  E+H FA + G +  V V  
Sbjct: 307 AEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVST 366

Query: 44  GLVDMYGKCGVLE 6
            ++D+Y KCG ++
Sbjct: 367 AILDVYCKCGAVD 379