BLASTX nr result

ID: Cimicifuga21_contig00019211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019211
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324325.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002331903.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002327600.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002306327.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16

>ref|XP_002324325.1| predicted protein [Populus trichocarpa] gi|222865759|gb|EEF02890.1|
           predicted protein [Populus trichocarpa]
          Length = 1026

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 52/121 (42%), Positives = 76/121 (62%)
 Frame = +3

Query: 12  KLARLINLRRRIPSNNSFDGAILANMSHTSNLRKHELASTKLTGKIPPELGSLSKLALLN 191
           ++ RL+ LR  + +NNS +G I AN+S  S+L +  +   KL G+IP ELG LSKL +L+
Sbjct: 117 EVGRLLRLRVLMLTNNSIEGKIPANLSGCSSLAELYIDRNKLGGEIPTELGFLSKLTILS 176

Query: 192 FHMNNITRRIPPSFSNLSSLQHLTLNFNYLEESL*DSLRGMPS*QYIRIGVNKFSGIVLP 371
           F  NN+  +IP S  NL+SL+ L+L  N LE ++ DSL  +     + +G NK SG + P
Sbjct: 177 FRQNNLLGKIPHSIGNLTSLESLSLKRNVLEGTIPDSLGRLKRLTSLLLGENKLSGFIPP 236

Query: 372 S 374
           S
Sbjct: 237 S 237


>ref|XP_002331903.1| predicted protein [Populus trichocarpa] gi|222874575|gb|EEF11706.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/119 (40%), Positives = 69/119 (57%)
 Frame = +3

Query: 9   KKLARLINLRRRIPSNNSFDGAILANMSHTSNLRKHELASTKLTGKIPPELGSLSKLALL 188
           +++ RL+ L+  I  NNSF G I AN+SH SNL    L    LTG +P  LGSLSKL + 
Sbjct: 112 REIDRLVRLQTLILGNNSFTGEIPANISHCSNLLSLNLEGNNLTGNLPAGLGSLSKLQVF 171

Query: 189 NFHMNNITRRIPPSFSNLSSLQHLTLNFNYLEESL*DSLRGMPS*QYIRIGVNKFSGIV 365
           +F  NN+  +IPPSF NLSS+  +    N L+  +  S+  + +  +  +G N  SG +
Sbjct: 172 SFRKNNLGGKIPPSFENLSSIIEIDGTLNNLQGGIPSSIGKLKTLSFFSLGSNNLSGTI 230


>ref|XP_002327600.1| predicted protein [Populus trichocarpa] gi|222836154|gb|EEE74575.1|
           predicted protein [Populus trichocarpa]
          Length = 985

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/119 (40%), Positives = 69/119 (57%)
 Frame = +3

Query: 9   KKLARLINLRRRIPSNNSFDGAILANMSHTSNLRKHELASTKLTGKIPPELGSLSKLALL 188
           +++ RL+ L+  I  NNSF G I AN+SH SNL    L    LTG +P  LGSLSKL + 
Sbjct: 89  QEIDRLVRLQTLILGNNSFTGEIPANISHCSNLLSLNLEGNNLTGNLPAGLGSLSKLQVF 148

Query: 189 NFHMNNITRRIPPSFSNLSSLQHLTLNFNYLEESL*DSLRGMPS*QYIRIGVNKFSGIV 365
           +F  NN+  +IPPSF NLSS+  +    N L+  +  S+  + +  +  +G N  SG +
Sbjct: 149 SFRKNNLGGKIPPSFENLSSIIEIDGTLNNLQGGIPSSIGKLKTLSFFSLGSNNLSGTI 207


>ref|XP_002306327.1| predicted protein [Populus trichocarpa] gi|222855776|gb|EEE93323.1|
           predicted protein [Populus trichocarpa]
          Length = 1011

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/119 (42%), Positives = 66/119 (55%)
 Frame = +3

Query: 9   KKLARLINLRRRIPSNNSFDGAILANMSHTSNLRKHELASTKLTGKIPPELGSLSKLALL 188
           ++L RL  L+R +  NN+F G I  N+S  SNL    L S  LTGKIP +LGSLSKL   
Sbjct: 116 QELGRLFRLQRLVLGNNTFSGEIPVNISSCSNLLVLHLGSNNLTGKIPAQLGSLSKLGAF 175

Query: 189 NFHMNNITRRIPPSFSNLSSLQHLTLNFNYLEESL*DSLRGMPS*QYIRIGVNKFSGIV 365
               NN+   IP SF NLSS+Q+     NYL   + +SL  +   +Y  +  N  SG +
Sbjct: 176 VLQGNNLVGDIPSSFGNLSSVQNFFWTKNYLRGGIPESLGNLKRLKYFAVAENDLSGTI 234


>ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|222855108|gb|EEE92655.1|
           predicted protein [Populus trichocarpa]
          Length = 1034

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 48/122 (39%), Positives = 75/122 (61%)
 Frame = +3

Query: 9   KKLARLINLRRRIPSNNSFDGAILANMSHTSNLRKHELASTKLTGKIPPELGSLSKLALL 188
           +++ RL  L+    SNNSF G I AN+S  S+L    L   KLTG+IP +LGSL KL  +
Sbjct: 121 QEIGRLDRLKYINFSNNSFSGEIPANLSGCSSLLMLRLGFNKLTGQIPYQLGSLQKLERV 180

Query: 189 NFHMNNITRRIPPSFSNLSSLQHLTLNFNYLEESL*DSLRGMPS*QYIRIGVNKFSGIVL 368
             H NN+   +P S  N+SS++ L+L+ N  E S+ D+L  + +  ++ +G+N  SG++ 
Sbjct: 181 QLHYNNLNGSVPDSLGNISSVRSLSLSVNNFEGSIPDALGRLKTLNFLGLGLNNLSGMIP 240

Query: 369 PS 374
           P+
Sbjct: 241 PT 242



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
 Frame = +3

Query: 12  KLARLINLRRRIPSNNSFDGAILANMSHTSNLRKHELASTKLTGKIPPELGSLSKLALLN 191
           +L  L  L R     N+ +G++  ++ + S++R   L+     G IP  LG L  L  L 
Sbjct: 170 QLGSLQKLERVQLHYNNLNGSVPDSLGNISSVRSLSLSVNNFEGSIPDALGRLKTLNFLG 229

Query: 192 FHMNNITRRIPPSFSNLSSLQHLTLNFNYLEESL*DSL-RGMPS*QYIRIGVNKFSG 359
             +NN++  IPP+  NLSSL   TL +N L  +L   L   +P+ Q + IG N FSG
Sbjct: 230 LGLNNLSGMIPPTIFNLSSLIVFTLPYNQLHGTLPSDLGLTLPNLQVLNIGHNFFSG 286


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