BLASTX nr result

ID: Cimicifuga21_contig00019205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019205
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273550.1| PREDICTED: short-chain dehydrogenase TIC 32,...   164   7e-39
ref|XP_002457359.1| hypothetical protein SORBIDRAFT_03g005980 [S...   160   8e-38
ref|XP_003568767.1| PREDICTED: retinol dehydrogenase 14-like [Br...   157   9e-37
gb|AFK45597.1| unknown [Medicago truncatula]                          156   1e-36
ref|XP_003637512.1| Retinol dehydrogenase [Medicago truncatula] ...   156   1e-36

>ref|XP_002273550.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|297741471|emb|CBI32603.3| unnamed protein
           product [Vitis vinifera]
          Length = 324

 Score =  164 bits (415), Expect = 7e-39
 Identities = 85/127 (66%), Positives = 98/127 (77%)
 Frame = -2

Query: 382 MGYISLITGSHGPSGFGSASTAEEVTNGINATYLTAIVTGGASGIGLETARVLALRGAQV 203
           MG  SLITG  GPSGFGSASTAE+VT G++A+ LTAIVTGGASGIG ETARVLALR A V
Sbjct: 1   MGIFSLITGRPGPSGFGSASTAEQVTEGVDASNLTAIVTGGASGIGFETARVLALRKAHV 60

Query: 202 IIGARNLEAANEAKQLILNENPTARIHVLKLDLCSIKSIKAFADEFXXXXXXXXXXXXNA 23
           +I ARN++AANEAKQLIL +N  A + VLKLDLCS+KSI+AF D F            NA
Sbjct: 61  VIAARNMDAANEAKQLILKDNEAAHVDVLKLDLCSMKSIRAFVDNFNALNLPLNLLINNA 120

Query: 22  GVMFCPY 2
           G+MFCP+
Sbjct: 121 GIMFCPF 127


>ref|XP_002457359.1| hypothetical protein SORBIDRAFT_03g005980 [Sorghum bicolor]
           gi|241929334|gb|EES02479.1| hypothetical protein
           SORBIDRAFT_03g005980 [Sorghum bicolor]
          Length = 320

 Score =  160 bits (406), Expect = 8e-38
 Identities = 81/127 (63%), Positives = 101/127 (79%)
 Frame = -2

Query: 382 MGYISLITGSHGPSGFGSASTAEEVTNGINATYLTAIVTGGASGIGLETARVLALRGAQV 203
           MG +SLITG  G SGFGSASTAE+VT+G++A+ LT ++TGGASGIGLET+RV ALRGA V
Sbjct: 1   MGILSLITGKAGASGFGSASTAEQVTDGVDASRLTVVITGGASGIGLETSRVFALRGAHV 60

Query: 202 IIGARNLEAANEAKQLILNENPTARIHVLKLDLCSIKSIKAFADEFXXXXXXXXXXXXNA 23
           +I ARN EAA+EA++ I+ +NPTARI VLKLDL S+KS++AFAD+F            NA
Sbjct: 61  VIAARNTEAASEARKTIMEKNPTARIDVLKLDLSSLKSVRAFADQFNSMKLPLNILINNA 120

Query: 22  GVMFCPY 2
           GVMFCP+
Sbjct: 121 GVMFCPF 127


>ref|XP_003568767.1| PREDICTED: retinol dehydrogenase 14-like [Brachypodium distachyon]
          Length = 320

 Score =  157 bits (397), Expect = 9e-37
 Identities = 82/127 (64%), Positives = 98/127 (77%)
 Frame = -2

Query: 382 MGYISLITGSHGPSGFGSASTAEEVTNGINATYLTAIVTGGASGIGLETARVLALRGAQV 203
           MG +SLITG  G SGFGS STAE+VT+G++AT LT IVTGG+SGIGLET+RV ALRGA V
Sbjct: 1   MGILSLITGKLGASGFGSGSTAEQVTDGVDATRLTVIVTGGSSGIGLETSRVFALRGAHV 60

Query: 202 IIGARNLEAANEAKQLILNENPTARIHVLKLDLCSIKSIKAFADEFXXXXXXXXXXXXNA 23
           II ARN EAA+EA++ I   NPTAR+ VLKLDL S+KS+KAFA++F            NA
Sbjct: 61  IIAARNTEAASEARKRITEANPTARVDVLKLDLSSLKSVKAFAEQFNSMNLPLNILINNA 120

Query: 22  GVMFCPY 2
           GVMFCP+
Sbjct: 121 GVMFCPF 127


>gb|AFK45597.1| unknown [Medicago truncatula]
          Length = 324

 Score =  156 bits (395), Expect = 1e-36
 Identities = 80/127 (62%), Positives = 96/127 (75%)
 Frame = -2

Query: 382 MGYISLITGSHGPSGFGSASTAEEVTNGINATYLTAIVTGGASGIGLETARVLALRGAQV 203
           +G ISLITG  GPSGFGSASTAE+VT GI+A+ LTAI+TGGASGIGLET RVLALR   V
Sbjct: 2   VGVISLITGMAGPSGFGSASTAEQVTQGIDASNLTAIITGGASGIGLETTRVLALRKVHV 61

Query: 202 IIGARNLEAANEAKQLILNENPTARIHVLKLDLCSIKSIKAFADEFXXXXXXXXXXXXNA 23
           II ARN+E+A EAKQ I  EN +AR+ ++KLDLCS KS+++F D F            NA
Sbjct: 62  IIAARNIESAEEAKQQITQENKSARVDIMKLDLCSTKSVRSFVDNFIALDLPLNILINNA 121

Query: 22  GVMFCPY 2
           G+MFCP+
Sbjct: 122 GIMFCPF 128


>ref|XP_003637512.1| Retinol dehydrogenase [Medicago truncatula]
           gi|355503447|gb|AES84650.1| Retinol dehydrogenase
           [Medicago truncatula]
          Length = 323

 Score =  156 bits (395), Expect = 1e-36
 Identities = 77/127 (60%), Positives = 99/127 (77%)
 Frame = -2

Query: 382 MGYISLITGSHGPSGFGSASTAEEVTNGINATYLTAIVTGGASGIGLETARVLALRGAQV 203
           +G  SL+TG  GPSGFGS++TAE+VT GI+A+ LTAI+TGGASGIGLETARVLALR   V
Sbjct: 2   VGIFSLVTGMAGPSGFGSSTTAEQVTQGIDASNLTAIITGGASGIGLETARVLALRKVHV 61

Query: 202 IIGARNLEAANEAKQLILNENPTARIHVLKLDLCSIKSIKAFADEFXXXXXXXXXXXXNA 23
           II ARN+E+A EAKQ+IL +N +AR+ ++KLDLCS+KS+++F + F            NA
Sbjct: 62  IIAARNMESAKEAKQIILQDNESARVDIMKLDLCSVKSVRSFVENFLALDLPLNILINNA 121

Query: 22  GVMFCPY 2
           GVMFCP+
Sbjct: 122 GVMFCPF 128


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