BLASTX nr result

ID: Cimicifuga21_contig00019203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019203
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310358.1| predicted protein [Populus trichocarpa] gi|2...   180   4e-43
emb|CBI18428.3| unnamed protein product [Vitis vinifera]              173   5e-41
ref|XP_002267790.1| PREDICTED: uncharacterized protein LOC100249...   173   5e-41
ref|XP_002513304.1| conserved hypothetical protein [Ricinus comm...   147   4e-33
ref|NP_001117620.1| uncharacterized protein [Arabidopsis thalian...   118   3e-24

>ref|XP_002310358.1| predicted protein [Populus trichocarpa] gi|222853261|gb|EEE90808.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  180 bits (457), Expect = 4e-43
 Identities = 86/146 (58%), Positives = 108/146 (73%)
 Frame = -3

Query: 785 MGTVVSKAANGIGAVLGNAFVAPIKSVFGGNCENVCSGTWDITCFIEHLCVSNIVKLVMV 606
           MG+VVS+AANGIG V+GNAF  PIK++FG +CE+VCSG WD+ CFIEHLCVS+++KL+M+
Sbjct: 1   MGSVVSQAANGIGGVVGNAFAVPIKTLFGVSCEDVCSGPWDLICFIEHLCVSDLLKLLMI 60

Query: 605 FCXXXXXXXXXXXXXXXXLVQCIVRSLCKMGWAACETYWFAVEDITCFLWHKLINTKRVH 426
           F                 + QCI RSLCKM WAACETYWFA++DITCFLWHKL NTKRV+
Sbjct: 61  FALSYMTLMFFYLLFKIGVCQCIGRSLCKMCWAACETYWFALDDITCFLWHKLKNTKRVN 120

Query: 425 XXXXRFKDVEEGYSSSEDHSNSVYYN 348
               RF+D+E GY+SS +   S  Y+
Sbjct: 121 -RRRRFRDIEAGYTSSSETDFSEDYH 145


>emb|CBI18428.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  173 bits (439), Expect = 5e-41
 Identities = 88/149 (59%), Positives = 105/149 (70%), Gaps = 2/149 (1%)
 Frame = -3

Query: 785  MGTVVSKAANGIGAVLGNAFVAPIKSVFGGNCENVCSGTWDITCFIEHLCVSNIVKLVMV 606
            MGTV+SKAANGIG  LGNAFVAPIK++FG +CE VC+GTWDITCFIEHLCVSN+VKL +V
Sbjct: 579  MGTVISKAANGIGGALGNAFVAPIKTIFGDSCEGVCAGTWDITCFIEHLCVSNLVKLFLV 638

Query: 605  FCXXXXXXXXXXXXXXXXLVQCIVRSLCKMGWAACETYWFAVEDITCFLWHKLINTKRVH 426
                              + QCI RSLCKM +AACETYW A++ ITCFLW+KL NTKRV+
Sbjct: 639  LGLCYITLLFFYLMFKLGIFQCIGRSLCKMCYAACETYWHALKYITCFLWYKLKNTKRVN 698

Query: 425  --XXXXRFKDVEEGYSSSEDHSNSVYYNT 345
                  RFKD E G+ SS+   +S  Y +
Sbjct: 699  RRRRRERFKDFELGHYSSDTSDSSNNYQS 727


>ref|XP_002267790.1| PREDICTED: uncharacterized protein LOC100249538 [Vitis vinifera]
          Length = 230

 Score =  173 bits (439), Expect = 5e-41
 Identities = 88/149 (59%), Positives = 105/149 (70%), Gaps = 2/149 (1%)
 Frame = -3

Query: 785 MGTVVSKAANGIGAVLGNAFVAPIKSVFGGNCENVCSGTWDITCFIEHLCVSNIVKLVMV 606
           MGTV+SKAANGIG  LGNAFVAPIK++FG +CE VC+GTWDITCFIEHLCVSN+VKL +V
Sbjct: 1   MGTVISKAANGIGGALGNAFVAPIKTIFGDSCEGVCAGTWDITCFIEHLCVSNLVKLFLV 60

Query: 605 FCXXXXXXXXXXXXXXXXLVQCIVRSLCKMGWAACETYWFAVEDITCFLWHKLINTKRVH 426
                             + QCI RSLCKM +AACETYW A++ ITCFLW+KL NTKRV+
Sbjct: 61  LGLCYITLLFFYLMFKLGIFQCIGRSLCKMCYAACETYWHALKYITCFLWYKLKNTKRVN 120

Query: 425 --XXXXRFKDVEEGYSSSEDHSNSVYYNT 345
                 RFKD E G+ SS+   +S  Y +
Sbjct: 121 RRRRRERFKDFELGHYSSDTSDSSNNYQS 149


>ref|XP_002513304.1| conserved hypothetical protein [Ricinus communis]
           gi|223547212|gb|EEF48707.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 193

 Score =  147 bits (371), Expect = 4e-33
 Identities = 68/134 (50%), Positives = 89/134 (66%), Gaps = 1/134 (0%)
 Frame = -3

Query: 785 MGTVVSKAANGIGAVLGNAFVAPIKSVFGGNCENVCSGTWDITCFIEHLCVSNIVKLVMV 606
           MG VV+KAANG+G V+GN F AP ++  G +C++VC+G WD+ CF+EHLCVS++VKLVM+
Sbjct: 1   MGAVVTKAANGVGGVVGNLFGAPFRAFLGASCQDVCAGPWDVMCFVEHLCVSDVVKLVMI 60

Query: 605 FCXXXXXXXXXXXXXXXXLVQCIVRSLCKMGWAACETYWFAVEDITCFLWHKLINTKRVH 426
                             + QCI RSLCKM WAACE+YW  +E ++CFLWHKL NTKR H
Sbjct: 61  LGLCYITLLFLYLLFKIGIWQCIGRSLCKMCWAACESYWSGLEYMSCFLWHKLKNTKRGH 120

Query: 425 -XXXXRFKDVEEGY 387
                   D+E G+
Sbjct: 121 RRRRRGCGDIERGW 134


>ref|NP_001117620.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332198058|gb|AEE36179.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 222

 Score =  118 bits (295), Expect = 3e-24
 Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
 Frame = -3

Query: 785 MGTVVSKAANGIGAVLGNAFVAPIKSVFGGNCENVCSGTWDITCFIEHLCVSNIVKLVMV 606
           MG  + KA+N IG  +GN F AP+K+  G +C +VCSG WD+ CFIEH C+ +I KLV++
Sbjct: 1   MGNAIGKASNDIGGFIGNIFTAPLKATLGRSCLDVCSGPWDLECFIEHFCLPDIAKLVLM 60

Query: 605 FCXXXXXXXXXXXXXXXXLVQCIVRSLCKMGWAACETYWFAVEDITCFLWHKLINTKRVH 426
                             + QC+V+S+CKM  AAC  YWF + ++   L H L N  RV+
Sbjct: 61  SSLCFIILMFITLLFKLGICQCVVKSICKMSCAACAAYWFDIGEMISCLCHSLTNINRVN 120

Query: 425 XXXXRFKDVEE---GYSSSEDHSNS 360
               R  D+E     Y S ++ S+S
Sbjct: 121 RRRKRLDDIEATTYDYPSDDESSSS 145


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