BLASTX nr result
ID: Cimicifuga21_contig00019180
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00019180 (289 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|2... 106 2e-21 ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransf... 104 9e-21 emb|CAN62777.1| hypothetical protein VITISV_019372 [Vitis vinifera] 104 9e-21 ref|XP_004159757.1| PREDICTED: rab proteins geranylgeranyltransf... 102 3e-20 ref|XP_004146177.1| PREDICTED: rab proteins geranylgeranyltransf... 102 3e-20 >ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|222832862|gb|EEE71339.1| predicted protein [Populus trichocarpa] Length = 553 Score = 106 bits (264), Expect = 2e-21 Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 9/103 (8%) Frame = -1 Query: 289 LVMGPSFIVPLPSPVQD---------LQQKRSDEQVARAVCIMRGSIMSGLSNLLVIFPP 137 LV+ PSF + PS L + +VAR +CI R S+ +SNLLV++PP Sbjct: 345 LVLDPSFTLASPSASPSDLLHESFNFLSTRDVKGKVARGICITRNSLKPDMSNLLVVYPP 404 Query: 136 RSLYPEQVASVRVLQLSNNLAVCPSGLFVLYLSVLCDDEAQGK 8 RSLYPEQ+ S+R LQ+S NLAVCP G+FVLYLS LCDD QGK Sbjct: 405 RSLYPEQITSIRALQISGNLAVCPLGMFVLYLSALCDDAIQGK 447 >ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransferase component A 2-like [Vitis vinifera] gi|296088658|emb|CBI37649.3| unnamed protein product [Vitis vinifera] Length = 556 Score = 104 bits (259), Expect = 9e-21 Identities = 52/105 (49%), Positives = 73/105 (69%), Gaps = 10/105 (9%) Frame = -1 Query: 289 LVMGPSFIVPLP-SPVQ-DLQQKRSD--------EQVARAVCIMRGSIMSGLSNLLVIFP 140 L++ PSFIVP+P +P Q D + S ++VAR +CIM+ S+ +SN + ++P Sbjct: 346 LLVDPSFIVPVPVAPSQPDCMPESSQVINLVDAKQKVARGICIMKSSLKPDVSNFVFVYP 405 Query: 139 PRSLYPEQVASVRVLQLSNNLAVCPSGLFVLYLSVLCDDEAQGKE 5 PRSLYPEQ ++R +Q+ +NL VCPSG+FVLYLS LC+D QGKE Sbjct: 406 PRSLYPEQAMAIRAVQIGSNLGVCPSGMFVLYLSTLCNDATQGKE 450 >emb|CAN62777.1| hypothetical protein VITISV_019372 [Vitis vinifera] Length = 812 Score = 104 bits (259), Expect = 9e-21 Identities = 52/105 (49%), Positives = 73/105 (69%), Gaps = 10/105 (9%) Frame = -1 Query: 289 LVMGPSFIVPLP-SPVQ-DLQQKRSD--------EQVARAVCIMRGSIMSGLSNLLVIFP 140 L++ PSFIVP+P +P Q D + S ++VAR +CIM+ S+ +SN + ++P Sbjct: 412 LLVDPSFIVPVPVAPSQPDCMPESSQVINLVYAKQKVARGICIMKSSLKPDVSNFVFVYP 471 Query: 139 PRSLYPEQVASVRVLQLSNNLAVCPSGLFVLYLSVLCDDEAQGKE 5 PRSLYPEQ ++R +Q+ +NL VCPSG+FVLYLS LC+D QGKE Sbjct: 472 PRSLYPEQAMAIRAVQIGSNLGVCPSGMFVLYLSTLCNDATQGKE 516 >ref|XP_004159757.1| PREDICTED: rab proteins geranylgeranyltransferase component A 2-like, partial [Cucumis sativus] Length = 425 Score = 102 bits (255), Expect = 3e-20 Identities = 49/100 (49%), Positives = 70/100 (70%), Gaps = 5/100 (5%) Frame = -1 Query: 289 LVMGPSFIVPLP-----SPVQDLQQKRSDEQVARAVCIMRGSIMSGLSNLLVIFPPRSLY 125 LV+ P FIVP +QD+ + + +VAR +CI + SI+S + N L+++PP++L+ Sbjct: 223 LVLDPCFIVPQLFKLSLESLQDVSSRDVNRKVARGICITKHSIVSDVKNCLLVYPPKTLF 282 Query: 124 PEQVASVRVLQLSNNLAVCPSGLFVLYLSVLCDDEAQGKE 5 PEQV+SVRVLQ+ NLAVCP +FV+Y+S LCD QGKE Sbjct: 283 PEQVSSVRVLQIGGNLAVCPEDMFVIYISTLCDSANQGKE 322 >ref|XP_004146177.1| PREDICTED: rab proteins geranylgeranyltransferase component A 1-like [Cucumis sativus] Length = 543 Score = 102 bits (255), Expect = 3e-20 Identities = 49/100 (49%), Positives = 70/100 (70%), Gaps = 5/100 (5%) Frame = -1 Query: 289 LVMGPSFIVPLP-----SPVQDLQQKRSDEQVARAVCIMRGSIMSGLSNLLVIFPPRSLY 125 LV+ P FIVP +QD+ + + +VAR +CI + SI+S + N L+++PP++L+ Sbjct: 341 LVLDPCFIVPQLFKLSLESLQDVSSRDVNRKVARGICITKHSIVSDVKNCLLVYPPKTLF 400 Query: 124 PEQVASVRVLQLSNNLAVCPSGLFVLYLSVLCDDEAQGKE 5 PEQV+SVRVLQ+ NLAVCP +FV+Y+S LCD QGKE Sbjct: 401 PEQVSSVRVLQIGGNLAVCPEDMFVIYISTLCDSANQGKE 440