BLASTX nr result

ID: Cimicifuga21_contig00019170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019170
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26274.3| unnamed protein product [Vitis vinifera]              524   e-146
ref|XP_002278798.1| PREDICTED: uncharacterized protein LOC100254...   522   e-146
ref|XP_002314687.1| predicted protein [Populus trichocarpa] gi|2...   514   e-143
ref|NP_565734.1| major facilitator protein [Arabidopsis thaliana...   512   e-143
ref|XP_002879362.1| integral membrane transporter family protein...   511   e-142

>emb|CBI26274.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  524 bits (1350), Expect = e-146
 Identities = 290/409 (70%), Positives = 316/409 (77%), Gaps = 4/409 (0%)
 Frame = -1

Query: 1217 IRRKSDTLIRSAGTSKRIHRKSKRKPPD--MSVTVPIPAPP-LSDENEEGDTSSRNQLLL 1047
            I RK  T +  AG     HRK++RKPP+  MSV+V +P P    D +++ D  SRN    
Sbjct: 31   IHRKPATFL--AGIHGITHRKTRRKPPEKSMSVSVQMPTPSHRRDRDDDTDVDSRN--CA 86

Query: 1046 EKGDTLKMDIEQETYS-SGTGKRKKRSYMSYVTCFGVDLSPDNIAVAMVYFVQGVLGLSR 870
             KGD L  ++E ET S S    RK R  MS V CFGVDLSPDN+AVAMVYFVQGVLGLSR
Sbjct: 87   GKGDMLTTNMEGETCSHSQVAPRKNRYLMSNVKCFGVDLSPDNVAVAMVYFVQGVLGLSR 146

Query: 869  LAVSFYLKDDLHLDPAETAVVTGVSALPLLVKPLYGFISDSFPLFGYRRRXXXXXXXXXX 690
            LAVSFYLKDDLHLDPAETAV++G SALP LVKPLYGFISDS PLFGYRRR          
Sbjct: 147  LAVSFYLKDDLHLDPAETAVISGFSALPWLVKPLYGFISDSLPLFGYRRRSYLVLSGLLG 206

Query: 689  XXXXXLMATLVDSKYGAAFCILLGSLSVAFSDVVVDSMVVERARGESQSTSGSLQSLCWG 510
                 LMAT VDSKYGAAFCILLGSLSVAFSDVVVDSMVVERARGESQS SGSLQSLCWG
Sbjct: 207  ALSWSLMATFVDSKYGAAFCILLGSLSVAFSDVVVDSMVVERARGESQSMSGSLQSLCWG 266

Query: 509  SSAFGGIVSAYFSGSLVEAYGVRFVFGITALLPLMTSAVAVLVKEKRTPSSTNGHGPAVS 330
            SSAFGGIVS+YFSGSLV AYGVRFVFG+TALLPL+TSAVA+LVKE+              
Sbjct: 267  SSAFGGIVSSYFSGSLVGAYGVRFVFGVTALLPLITSAVAILVKEQ-------------- 312

Query: 329  QGFVESSKQNLIQLWGAIRQPNVFLPTLFIFLWQATPHSESAMFYFTTNQLGFTPEFLGR 150
                     N+IQLW A+RQ N+FLPTLFIFLWQATPHS+SAMFYFTTN+LGFTPEFLGR
Sbjct: 313  --------PNIIQLWDAVRQRNIFLPTLFIFLWQATPHSDSAMFYFTTNRLGFTPEFLGR 364

Query: 149  VKLVTSVASLLGVGLYNGFLKNVALRKIFLVTTIIGSTLGMTQVFLVTG 3
            VKLVTSVASL+GVGLYNGFLK+V LRKIF VTTI GS LGMTQVFLVTG
Sbjct: 365  VKLVTSVASLIGVGLYNGFLKDVPLRKIFFVTTIFGSALGMTQVFLVTG 413


>ref|XP_002278798.1| PREDICTED: uncharacterized protein LOC100254579 [Vitis vinifera]
          Length = 482

 Score =  522 bits (1344), Expect = e-146
 Identities = 275/349 (78%), Positives = 293/349 (83%), Gaps = 2/349 (0%)
 Frame = -1

Query: 1043 KGDTLKMDIEQETYS-SGTGKRKKRSYMSYVTCFGVDLSPDNIAVAMVYFVQGVLGLSRL 867
            KGD L  ++E ET S S    RK R  MS V CFGVDLSPDN+AVAMVYFVQGVLGLSRL
Sbjct: 9    KGDMLTTNMEGETCSHSQVAPRKNRYLMSNVKCFGVDLSPDNVAVAMVYFVQGVLGLSRL 68

Query: 866  AVSFYLKDDLHLDPAETAVVTGVSALPLLVKPLYGFISDSFPLFGYRRRXXXXXXXXXXX 687
            AVSFYLKDDLHLDPAETAV++G SALP LVKPLYGFISDS PLFGYRRR           
Sbjct: 69   AVSFYLKDDLHLDPAETAVISGFSALPWLVKPLYGFISDSLPLFGYRRRSYLVLSGLLGA 128

Query: 686  XXXXLMATLVDSKYGAAFCILLGSLSVAFSDVVVDSMVVERARGESQSTSGSLQSLCWGS 507
                LMAT VDSKYGAAFCILLGSLSVAFSDVVVDSMVVERARGESQS SGSLQSLCWGS
Sbjct: 129  LSWSLMATFVDSKYGAAFCILLGSLSVAFSDVVVDSMVVERARGESQSMSGSLQSLCWGS 188

Query: 506  SAFGGIVSAYFSGSLVEAYGVRFVFGITALLPLMTSAVAVLVKEKRTPSSTNGHG-PAVS 330
            SAFGGIVS+YFSGSLV AYGVRFVFG+TALLPL+TSAVA+LVKE+       G   P +S
Sbjct: 189  SAFGGIVSSYFSGSLVGAYGVRFVFGVTALLPLITSAVAILVKEQPVAGPARGQAFPLIS 248

Query: 329  QGFVESSKQNLIQLWGAIRQPNVFLPTLFIFLWQATPHSESAMFYFTTNQLGFTPEFLGR 150
              F ESSKQN+IQLW A+RQ N+FLPTLFIFLWQATPHS+SAMFYFTTN+LGFTPEFLGR
Sbjct: 249  PSFYESSKQNIIQLWDAVRQRNIFLPTLFIFLWQATPHSDSAMFYFTTNRLGFTPEFLGR 308

Query: 149  VKLVTSVASLLGVGLYNGFLKNVALRKIFLVTTIIGSTLGMTQVFLVTG 3
            VKLVTSVASL+GVGLYNGFLK+V LRKIF VTTI GS LGMTQVFLVTG
Sbjct: 309  VKLVTSVASLIGVGLYNGFLKDVPLRKIFFVTTIFGSALGMTQVFLVTG 357


>ref|XP_002314687.1| predicted protein [Populus trichocarpa] gi|222863727|gb|EEF00858.1|
            predicted protein [Populus trichocarpa]
          Length = 559

 Score =  514 bits (1323), Expect = e-143
 Identities = 272/396 (68%), Positives = 314/396 (79%), Gaps = 9/396 (2%)
 Frame = -1

Query: 1163 HRKSKRKP-------PDMSVTVPIPAPP-LSDENEEGDTSSRNQLLLEKGDTLKMDIEQE 1008
            HR+++R+P        DMSV + +P P    D++++    S N     + + L  D+E E
Sbjct: 42   HRRTRRRPRRKLAGGKDMSVAINMPTPSHRRDKSQDSVLDSTNSA--GEREMLTADVEGE 99

Query: 1007 TYSSGTGKRKKRSYMSYVTCFGVDLSPDNIAVAMVYFVQGVLGLSRLAVSFYLKDDLHLD 828
              S+     +   Y+    CFGVDLSPDNIAVAMVYFVQGVLGL+RLAVSFYLKDDLHL+
Sbjct: 100  MSSTSKNAMRISKYLISRICFGVDLSPDNIAVAMVYFVQGVLGLARLAVSFYLKDDLHLE 159

Query: 827  PAETAVVTGVSALPLLVKPLYGFISDSFPLFGYRRRXXXXXXXXXXXXXXXLMATLVDSK 648
            PAETAV++G SALP L+KPLYGFISDS PLFGYRRR               LM+T VDSK
Sbjct: 160  PAETAVISGFSALPWLIKPLYGFISDSVPLFGYRRRSYLVLSGLLGALSWSLMSTFVDSK 219

Query: 647  YGAAFCILLGSLSVAFSDVVVDSMVVERARGESQSTSGSLQSLCWGSSAFGGIVSAYFSG 468
            Y AAFCILLGSLSVAFSDVVVDSMVVERARGESQS SGSLQSLCWGSSAFGGIVS+YFSG
Sbjct: 220  YSAAFCILLGSLSVAFSDVVVDSMVVERARGESQSMSGSLQSLCWGSSAFGGIVSSYFSG 279

Query: 467  SLVEAYGVRFVFGITALLPLMTSAVAVLVKEKRTPSSTNGHGPAV-SQGFVESSKQNLIQ 291
            SLV+AYGVRFVFG+TALLPL+TSAVAVLV+E+R     +G   A+   GF+ESSKQ+++Q
Sbjct: 280  SLVDAYGVRFVFGVTALLPLITSAVAVLVREQRVLGPASGPSLALPGSGFLESSKQHIVQ 339

Query: 290  LWGAIRQPNVFLPTLFIFLWQATPHSESAMFYFTTNQLGFTPEFLGRVKLVTSVASLLGV 111
            LW A++QPNVFLPTLFIFLWQATP S+SAMF+FTTN+LGFTPEFLGRVKLVTSVASLLGV
Sbjct: 340  LWDAVKQPNVFLPTLFIFLWQATPQSDSAMFFFTTNKLGFTPEFLGRVKLVTSVASLLGV 399

Query: 110  GLYNGFLKNVALRKIFLVTTIIGSTLGMTQVFLVTG 3
            GLYNGFLKNV LRKIF+ TT+ G+ LGMTQVFLVTG
Sbjct: 400  GLYNGFLKNVPLRKIFVATTVTGTALGMTQVFLVTG 435


>ref|NP_565734.1| major facilitator protein [Arabidopsis thaliana]
            gi|75206588|sp|Q9SKZ5.2|FBT1_ARATH RecName:
            Full=Folate-biopterin transporter 1, chloroplastic;
            Flags: Precursor gi|19698919|gb|AAL91195.1| unknown
            protein [Arabidopsis thaliana] gi|20197619|gb|AAD15400.2|
            expressed protein [Arabidopsis thaliana]
            gi|21553656|gb|AAM62749.1| unknown [Arabidopsis thaliana]
            gi|28059039|gb|AAO29981.1| unknown protein [Arabidopsis
            thaliana] gi|330253531|gb|AEC08625.1| major facilitator
            protein [Arabidopsis thaliana]
          Length = 560

 Score =  512 bits (1318), Expect = e-143
 Identities = 281/411 (68%), Positives = 322/411 (78%), Gaps = 15/411 (3%)
 Frame = -1

Query: 1190 RSAGTSKRIHRKSKRK----PPD--MSVTVPIPAPPLSDENEEGDTSSRNQLLLEKGDTL 1029
            R    + R HR S+RK    PPD  MS  V IP  P   ++EE      +++ + +GDT 
Sbjct: 27   RRLAIAARSHRLSRRKIRKRPPDRDMSSIVSIPELPRRRDSEESLLLD-SRISVAEGDTS 85

Query: 1028 KMDIEQETYSSGTGK-----RKKRSYMSY-VTCFGVDLSPDNIAVAMVYFVQGVLGLSRL 867
              D+E +  ++ + +     RK R+  S  +  +GV+LSPDN+AVAMVYFVQGVLGL+RL
Sbjct: 86   NTDVEGDRDTTSSIRTQPPPRKGRNLSSSRIKFYGVELSPDNVAVAMVYFVQGVLGLARL 145

Query: 866  AVSFYLKDDLHLDPAETAVVTGVSALPLLVKPLYGFISDSFPLFGYRRRXXXXXXXXXXX 687
            AVSFYLKDDLHLDPAETAV+TG+S+LP LVKPLYGFISDS PLFGYRRR           
Sbjct: 146  AVSFYLKDDLHLDPAETAVITGLSSLPWLVKPLYGFISDSVPLFGYRRRSYLVLSGLLGA 205

Query: 686  XXXXLMATLVDSKYGAAFCILLGSLSVAFSDVVVDSMVVERARGESQSTSGSLQSLCWGS 507
                LMA  VDSKY AAFCILLGSLSVAFSDVVVDSMVVERARGESQS SGSLQSLCWGS
Sbjct: 206  FSWSLMAGFVDSKYSAAFCILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGS 265

Query: 506  SAFGGIVSAYFSGSLVEAYGVRFVFGITALLPLMTSAVAVLVKEKRTPSSTNGHGPAV-- 333
            SAFGGIVS+YFSGSLVE+YGVRFVFG+TALLPL+TSAVAVLV E+R     +G    +  
Sbjct: 266  SAFGGIVSSYFSGSLVESYGVRFVFGVTALLPLITSAVAVLVNEQRVVRPASGQKENITL 325

Query: 332  -SQGFVESSKQNLIQLWGAIRQPNVFLPTLFIFLWQATPHSESAMFYFTTNQLGFTPEFL 156
             S GF+++SKQN+IQLWGAI+QPNVFLPTLFIFLWQATPHS+SAMFYFTTN+LGFTPEFL
Sbjct: 326  LSPGFLQTSKQNMIQLWGAIKQPNVFLPTLFIFLWQATPHSDSAMFYFTTNKLGFTPEFL 385

Query: 155  GRVKLVTSVASLLGVGLYNGFLKNVALRKIFLVTTIIGSTLGMTQVFLVTG 3
            GRVKLVTS+ASLLGVGLYNGFLK V LRKIFLVTTI G+ LGMTQV LV+G
Sbjct: 386  GRVKLVTSIASLLGVGLYNGFLKTVPLRKIFLVTTIFGTGLGMTQVILVSG 436


>ref|XP_002879362.1| integral membrane transporter family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297325201|gb|EFH55621.1| integral
            membrane transporter family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 558

 Score =  511 bits (1315), Expect = e-142
 Identities = 279/404 (69%), Positives = 317/404 (78%), Gaps = 10/404 (2%)
 Frame = -1

Query: 1184 AGTSKRIHRKSKRKPP---DMSVTVPIPAPPLSDENEEGDTSSRNQLLLEKGDTLKMDIE 1014
            A  S R+ R+  RK P   DMS  V IP  P   ++EE      +++ + +GDT   ++E
Sbjct: 32   AARSHRVPRRKIRKRPPDRDMSSIVSIPELPRRRDSEESLLLD-SRISVAEGDTSNTNVE 90

Query: 1013 QE--TYSSGTGKRKKRSYMSYVTC--FGVDLSPDNIAVAMVYFVQGVLGLSRLAVSFYLK 846
            ++  T S  T   +K   +S      +GV+LSPDN+AVAMVYFVQGVLGL+RLAVSFYLK
Sbjct: 91   EDRDTSSIRTQPPRKERNLSITRSKFYGVELSPDNVAVAMVYFVQGVLGLARLAVSFYLK 150

Query: 845  DDLHLDPAETAVVTGVSALPLLVKPLYGFISDSFPLFGYRRRXXXXXXXXXXXXXXXLMA 666
            DDL LDPAETAV+TG+S+LP LVKPLYGFISDS PLFGYRRR               LMA
Sbjct: 151  DDLRLDPAETAVITGLSSLPWLVKPLYGFISDSVPLFGYRRRSYLVLSGLLGAFSWSLMA 210

Query: 665  TLVDSKYGAAFCILLGSLSVAFSDVVVDSMVVERARGESQSTSGSLQSLCWGSSAFGGIV 486
              VDSKY AAFCILLGSLSVAFSDVVVDSMVVERARGESQS SGSLQSLCWGSSAFGGIV
Sbjct: 211  AFVDSKYSAAFCILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAFGGIV 270

Query: 485  SAYFSGSLVEAYGVRFVFGITALLPLMTSAVAVLVKEKRTPSSTNGHG---PAVSQGFVE 315
            S+YFSGSLVE+YGVRFVFG+TALLPL+TSAVAVLV E+R     +G     P VS GF++
Sbjct: 271  SSYFSGSLVESYGVRFVFGVTALLPLITSAVAVLVNEQRVVRPASGQKENIPLVSPGFLQ 330

Query: 314  SSKQNLIQLWGAIRQPNVFLPTLFIFLWQATPHSESAMFYFTTNQLGFTPEFLGRVKLVT 135
            +SKQN+IQLW AI+QPNVFLPTLFIFLWQATPHS+SAMFYFTTN+LGFTPEFLGRVKLVT
Sbjct: 331  TSKQNMIQLWSAIKQPNVFLPTLFIFLWQATPHSDSAMFYFTTNKLGFTPEFLGRVKLVT 390

Query: 134  SVASLLGVGLYNGFLKNVALRKIFLVTTIIGSTLGMTQVFLVTG 3
            S+ASLLGVGLYNGFLK V LRKIFLVTTI G+ LGMTQV LV+G
Sbjct: 391  SIASLLGVGLYNGFLKTVPLRKIFLVTTIFGTGLGMTQVILVSG 434


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