BLASTX nr result

ID: Cimicifuga21_contig00019142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019142
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like is...   143   3e-46
ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   142   9e-46
gb|AFK35500.1| unknown [Lotus japonicus]                              140   4e-45
emb|CBI17162.3| unnamed protein product [Vitis vinifera]              138   4e-45
ref|XP_002523696.1| conserved hypothetical protein [Ricinus comm...   135   5e-44

>ref|XP_004152166.1| PREDICTED: 50S ribosomal protein L18-like isoform 1 [Cucumis
           sativus] gi|449468916|ref|XP_004152167.1| PREDICTED: 50S
           ribosomal protein L18-like isoform 2 [Cucumis sativus]
          Length = 129

 Score =  143 bits (361), Expect(2) = 3e-46
 Identities = 65/81 (80%), Positives = 78/81 (96%)
 Frame = -2

Query: 274 EHALKEALECGRSCNAKAASAVGEVLAMRLKVEGLEQGEGRGIHADVEKEIQKKGFKNQT 95
           EH++K +LECGRSCNAKAA+ VGEVLAMRLKV+GLEQG+GRGIHAD++KEI+KKGFKN T
Sbjct: 38  EHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHT 97

Query: 94  KVWAIINSLKNNGVKLILENH 32
           K+WAI+NSLKNNGVKLIL+N+
Sbjct: 98  KIWAIVNSLKNNGVKLILDNN 118



 Score = 67.4 bits (163), Expect(2) = 3e-46
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = -3

Query: 477 MTAMKRYVLRLFISLKYITANVVDRNNGRIVATAST 370
           MT +KRYVLRLF+SLKYITANVVDRNNGR+VATAST
Sbjct: 1   MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATAST 36


>ref|XP_004165546.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L18-like
           [Cucumis sativus]
          Length = 129

 Score =  142 bits (357), Expect(2) = 9e-46
 Identities = 65/81 (80%), Positives = 77/81 (95%)
 Frame = -2

Query: 274 EHALKEALECGRSCNAKAASAVGEVLAMRLKVEGLEQGEGRGIHADVEKEIQKKGFKNQT 95
           EH++K +LECGRSCNAKAA+ VGEVLAMRLKV+GLEQG+GRGIHAD +KEI+KKGFKN T
Sbjct: 38  EHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADXKKEIEKKGFKNHT 97

Query: 94  KVWAIINSLKNNGVKLILENH 32
           K+WAI+NSLKNNGVKLIL+N+
Sbjct: 98  KIWAIVNSLKNNGVKLILDNN 118



 Score = 67.4 bits (163), Expect(2) = 9e-46
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = -3

Query: 477 MTAMKRYVLRLFISLKYITANVVDRNNGRIVATAST 370
           MT +KRYVLRLF+SLKYITANVVDRNNGR+VATAST
Sbjct: 1   MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATAST 36


>gb|AFK35500.1| unknown [Lotus japonicus]
          Length = 128

 Score =  140 bits (353), Expect(2) = 4e-45
 Identities = 63/86 (73%), Positives = 78/86 (90%)
 Frame = -2

Query: 274 EHALKEALECGRSCNAKAASAVGEVLAMRLKVEGLEQGEGRGIHADVEKEIQKKGFKNQT 95
           EHA+KE+LECGRSCNAKAA+ VGEVLA RLKVEGL +GEGRGIH +V+KE++KKGFKNQT
Sbjct: 38  EHAMKESLECGRSCNAKAAAIVGEVLARRLKVEGLNEGEGRGIHVNVKKEVEKKGFKNQT 97

Query: 94  KVWAIINSLKNNGVKLILENHDGAPS 17
           K+WA++N+LKNNGVKL+L++ D   S
Sbjct: 98  KIWAVVNALKNNGVKLVLDDEDDTNS 123



 Score = 66.6 bits (161), Expect(2) = 4e-45
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = -3

Query: 477 MTAMKRYVLRLFISLKYITANVVDRNNGRIVATAST 370
           MT MKRYVLRLF SLKYITANVVDRNNGRIVAT+ST
Sbjct: 1   MTLMKRYVLRLFTSLKYITANVVDRNNGRIVATSST 36


>emb|CBI17162.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  138 bits (348), Expect(2) = 4e-45
 Identities = 61/84 (72%), Positives = 76/84 (90%)
 Frame = -2

Query: 274 EHALKEALECGRSCNAKAASAVGEVLAMRLKVEGLEQGEGRGIHADVEKEIQKKGFKNQT 95
           EHA+K +LECGRSCNAKAA  VGEVLAMRLKVEGLE+G+GRGIH DV KE++KKGFKN+T
Sbjct: 38  EHAIKGSLECGRSCNAKAAGVVGEVLAMRLKVEGLEEGQGRGIHVDVNKEVEKKGFKNRT 97

Query: 94  KVWAIINSLKNNGVKLILENHDGA 23
           K+WA++N LKNNG+KLIL++ + +
Sbjct: 98  KIWAVVNGLKNNGIKLILDDDENS 121



 Score = 68.6 bits (166), Expect(2) = 4e-45
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = -3

Query: 477 MTAMKRYVLRLFISLKYITANVVDRNNGRIVATAST 370
           MT +KRYVLRLFISLKYITANVVDRNNGRI+ATAST
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIIATAST 36


>ref|XP_002523696.1| conserved hypothetical protein [Ricinus communis]
           gi|223537000|gb|EEF38636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 129

 Score =  135 bits (340), Expect(2) = 5e-44
 Identities = 61/82 (74%), Positives = 74/82 (90%)
 Frame = -2

Query: 274 EHALKEALECGRSCNAKAASAVGEVLAMRLKVEGLEQGEGRGIHADVEKEIQKKGFKNQT 95
           EH++K  LECGRSCNAKAA+ VGEVLAMRLKVEGLEQG+GRGIH D  KE++KKGFKN+T
Sbjct: 38  EHSIKNTLECGRSCNAKAAAIVGEVLAMRLKVEGLEQGQGRGIHVDANKEVEKKGFKNRT 97

Query: 94  KVWAIINSLKNNGVKLILENHD 29
           K+WAIIN+L+NNGVK+I  ++D
Sbjct: 98  KIWAIINALRNNGVKVISNDND 119



 Score = 68.2 bits (165), Expect(2) = 5e-44
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = -3

Query: 477 MTAMKRYVLRLFISLKYITANVVDRNNGRIVATAST 370
           MT +KRYVLR+FISLKYITANVVDRNNGRIVATAST
Sbjct: 1   MTVLKRYVLRMFISLKYITANVVDRNNGRIVATAST 36


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