BLASTX nr result

ID: Cimicifuga21_contig00019134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019134
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...   119   2e-24
emb|CBI27542.3| unnamed protein product [Vitis vinifera]              104   3e-20
ref|XP_002514971.1| conserved hypothetical protein [Ricinus comm...   104   4e-20
ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-17
ref|XP_004159559.1| PREDICTED: F-box protein SKIP14-like [Cucumi...    94   5e-17

>ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 458

 Score =  119 bits (297), Expect = 2e-24
 Identities = 82/227 (36%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
 Frame = +2

Query: 413  MTLNYTHRSFFPVNPCEGNSSSFKDRYVFEGISEKNGSAYGKPCCFDFEFENSFDCGKDG 592
            M LN++HR  FP +  E N  S         I   NG           E  + FD G+D 
Sbjct: 1    MALNFSHRPIFPAHLAEDNLVS--------PIRIANG-----------EVADCFDYGRDR 41

Query: 593  ADKGGSV-ESVTNDIIDLLPSDPFGMGISATFTAIAGWVEDFEPD--------------- 724
             D+GGS  ESV+NDI+DLLPSDPFGM IS TFTAI GW+ED E D               
Sbjct: 42   DDRGGSQQESVSNDILDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYGTDEIGTSQGN 101

Query: 725  -----SFNIMWNRTLTFQTEPGKE-VYERVNRSGGFDGNIGELRSVSRQDECSL--VCNA 880
                   N +WN  + FQ  PGK  + ++ + + GF G   E         C    +C  
Sbjct: 102  YELFAGLNFIWNNAMRFQALPGKAWLDDKSDIACGFGGFTEEKEVADPSYNCRFGPICVV 161

Query: 881  EKYLNFNSEDAHVSNQQYKESEKGTGLCHGEDGGPPHEALMFALGKL 1021
            E  L+  +E+   ++ Q +E  +  G C+  DG  PH A+ FALG L
Sbjct: 162  EDVLSSGNENVCGASCQAEEFREFNGSCYDGDGAAPHAAVSFALGYL 208


>emb|CBI27542.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  104 bits (260), Expect = 3e-20
 Identities = 76/204 (37%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
 Frame = +2

Query: 413  MTLNYTHRSFFPVNPCEGNSSSFKDRYVFEGISEKNGSAYGKPCCFDFEFENSFDCGKDG 592
            M LN++HR  FP +  E N  S         I   NG           E  + FD G+D 
Sbjct: 1    MALNFSHRPIFPAHLAEDNLVS--------PIRIANG-----------EVADCFDYGRDR 41

Query: 593  ADKGGSV-ESVTNDIIDLLPSDPFGMGISATFTAIAGWVEDFEPDSFNIMWNRTLTFQTE 769
             D+GGS  ESV+NDI+DLLPSDPFGM IS TFTAI GW+ED E D           FQ  
Sbjct: 42   DDRGGSQQESVSNDILDLLPSDPFGMDISTTFTAITGWLEDLEVDYGG--------FQAL 93

Query: 770  PGKEVYERVNRSGGFDGNIGELRSVSRQDECSLVCNAEKYLNFNSEDAHVSNQQYKESEK 949
            PGK   +  +      GN         ++ C   C AE++  FN                
Sbjct: 94   PGKAWLDDKSDIACGSGN---------ENVCGASCQAEEFREFN---------------- 128

Query: 950  GTGLCHGEDGGPPHEALMFALGKL 1021
              G C+  DG  PH A+ FALG L
Sbjct: 129  --GSCYDGDGAAPHAAVSFALGYL 150


>ref|XP_002514971.1| conserved hypothetical protein [Ricinus communis]
            gi|223546022|gb|EEF47525.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 483

 Score =  104 bits (259), Expect = 4e-20
 Identities = 79/235 (33%), Positives = 107/235 (45%), Gaps = 32/235 (13%)
 Frame = +2

Query: 413  MTLNYTHRSFFPVNPCEGNSSS---FKDRYVFEGISEKNGSAYGKPCCFDFEFENSFDCG 583
            M LN++HR+ FP +  E N  +     + Y+ E                  + EN FD G
Sbjct: 1    MALNFSHRTLFPGHLPEDNLVTPMRLANGYLVED-----------------KVENCFDYG 43

Query: 584  KDGADKGG---SVESVTNDIIDLLPSDPFGMGISATFTAIAGWVEDFEPD---------- 724
            +D +D+ G   S ESV  DI+DLLPSDPFGM IS TFTA+ GW+ED E D          
Sbjct: 44   RDRSDRCGPCGSQESVHKDILDLLPSDPFGMDISTTFTALTGWLEDLEMDYTGYSSDQVA 103

Query: 725  ----------SFNIMWNRTLTFQTEPGKEVYE-RVNRSGGFDGNIGELRSVSRQDECS-- 865
                        N +W+  + FQ  PG   ++ R N +GGF     EL        C+  
Sbjct: 104  TSDGSYQLFAGLNFIWSNAMRFQNFPGSMRFDCRSNAAGGFCDGCLELEGTCASGPCAFG 163

Query: 866  LVCNAEKYLNFNSEDAHVSNQQ---YKESEKGTGLCHGEDGGPPHEALMFALGKL 1021
            + CN E   +  +E   V N+     + SE+   +    D G PH AL FAL  L
Sbjct: 164  VTCNLENIFSLGNE--LVGNKDVGIMERSEESHEVSSDGDVGAPHSALGFALAFL 216


>ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|222864676|gb|EEF01807.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 74/231 (32%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
 Frame = +2

Query: 413  MTLNYTHRSFFPVNPCEGNSSSFKDRYVFEGISEKNGSAYGKPCCFDFEFENSFDCGKDG 592
            M LN++HR  FP    E N  S     + E + +          CFD+           G
Sbjct: 1    MALNFSHRPLFP-RLSEDNLVSPMRISIQEKVED----------CFDY-----------G 38

Query: 593  ADKGGSVESVTNDIIDLLPSDPFGMGISATFTAIAGWVEDFEPD---------------- 724
             D+ GS ESV  DI+DLLPSDPFGM IS TFTA+ GW+ED E D                
Sbjct: 39   RDRSGSQESVHKDILDLLPSDPFGMDISTTFTAVTGWLEDLEVDYGGYGRDRVSTRDGNY 98

Query: 725  ----SFNIMWNRTLTFQTEPGKEVYERVNRSGGFDGNIGELRSVS---RQDECSLVCNAE 883
                  N + N  + FQ  PG   ++  N  GG+     E   V     Q+     C+ E
Sbjct: 99   QLFADLNFICNNAMWFQQFPGNMGFDLSNVVGGYGDERSEANEVGNAPHQEAPGSDCDME 158

Query: 884  KYLN-----FNSEDAHVSNQQYKESEKGTGLCHGEDGGPPHEALMFALGKL 1021
              L+      ++E   V ++   E + G  +C   D   PH A  FALG L
Sbjct: 159  DVLSPGNEIIDNETVGVVDESSGEFQNGHLVCSEGDKEAPHAAFAFALGYL 209


>ref|XP_004159559.1| PREDICTED: F-box protein SKIP14-like [Cucumis sativus]
          Length = 491

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 72/232 (31%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
 Frame = +2

Query: 413  MTLNYTHRSFFPVNPCEGNSSS---FKDRYVFEGISEKNGSAYGKPCCFDFEFENSFDCG 583
            M LN++ R   P++  E N  S     + Y+ EGI E N     KP     E ++ FD G
Sbjct: 1    MALNFSCRPLIPLHLSEDNLVSPMRIANGYIVEGIPENNAEGCRKPWHRGQEVDDCFDHG 60

Query: 584  KDGADKGGSVESVTNDIIDLLPSDPFGMGISATFTAIAGWVEDFEPD------------- 724
            KD      S + V+ DI+ +LP+DPFGM IS TFTAI GW+ED E D             
Sbjct: 61   KDSCSDS-SQDPVSKDILHILPADPFGMDISTTFTAITGWLEDMEVDYDECFSNRAGTGA 119

Query: 725  -----------SFNIMWNRTLTFQTEPG-----KEVYERVNRSGGFDGNIGELRSVSRQD 856
                         N +WN  L FQT P      ++ Y   +     DG +     V+   
Sbjct: 120  GAGGKDIEFFACMNFIWNNALKFQTFPETKSTVQKPYPIYSCDRCLDGKV--TGDVACCC 177

Query: 857  ECSLVCNAEKYLNFNSEDAHVSNQQYKESEKGTGLCHGEDGGPPHEALMFAL 1012
            +   +C+ ++    N +      Q   E ++        DGG PH AL FAL
Sbjct: 178  DFGSICSMDEAFFANDDAPSCCGQLDIECQEQNYTYTEIDGGAPHAALSFAL 229


Top