BLASTX nr result

ID: Cimicifuga21_contig00019133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019133
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280245.1| PREDICTED: leucine-rich repeat extensin-like...   494   e-137
ref|NP_001240861.1| leucine-rich repeat extensin-like protein 4-...   484   e-134
ref|XP_002514194.1| serine-threonine protein kinase, plant-type,...   481   e-133
ref|XP_002308303.1| predicted protein [Populus trichocarpa] gi|2...   481   e-133
emb|CAN62837.1| hypothetical protein VITISV_004527 [Vitis vinifera]   479   e-133

>ref|XP_002280245.1| PREDICTED: leucine-rich repeat extensin-like protein 4-like [Vitis
            vinifera]
          Length = 414

 Score =  494 bits (1273), Expect = e-137
 Identities = 241/355 (67%), Positives = 281/355 (79%), Gaps = 4/355 (1%)
 Frame = +2

Query: 2    WVGGG---QIPSRSLHSSPKDAYTALQAWKSAITDDPLGILKTWVGTNVCTYKGIFCENS 172
            W+GGG   Q P     SS   AYTALQAWKSAITDDPL +L+TWVG+NVC Y+G+FC + 
Sbjct: 46   WIGGGIDGQNPPGYTASSLSSAYTALQAWKSAITDDPLKVLRTWVGSNVCAYRGVFCADP 105

Query: 173  QADMSSTSNPVVKAIDLNKFNLQGTLVQEXXXXXXXXXXXXXXXRFIGTIPITFREFNSL 352
            + D S  + PVV  IDLN+ NLQGTLV+E               RF GT+P +FR   SL
Sbjct: 106  EEDGSGQTGPVVAGIDLNRANLQGTLVKELSVLTDMSLLHLSGNRFTGTVPESFRYLLSL 165

Query: 353  TELDLSNNLFSGPFPRSILTLPNLIYLDLRFNNFSGYIPDALFNMNLDAILLNNNQFEGQ 532
             ELDLSNN FSGPFP   L +PNLIYLD+RFNNF+G IPD LFN  LDAI++NNNQF+G+
Sbjct: 166  KELDLSNNHFSGPFPTVTLLMPNLIYLDIRFNNFAGPIPDDLFNKELDAIIINNNQFDGE 225

Query: 533  IPQSLGNSPASVINLANNKFSGDIPTSFGYMGPALKEVLFLNNQLTGCIPEGVGFLTEIE 712
            +P +LGNSPASVINLANNKFSG+IPTSF YM P LKE+LFLNNQLTGCIPEGVG    +E
Sbjct: 226  LPPNLGNSPASVINLANNKFSGNIPTSFAYMNPKLKEILFLNNQLTGCIPEGVGMWDGME 285

Query: 713  VMDVSFNSLMGHLPDTISCMSQIEVLNFAHNELSGYLPDLVCSLRSIINLTVSYNFFSGF 892
            V+D+S NSLMGHLP++ISC+ +IEVLN AHN+LSG L DLVCSLRSI+NLTV+YNFFSGF
Sbjct: 286  VLDLSHNSLMGHLPNSISCLEEIEVLNLAHNKLSGSLSDLVCSLRSIVNLTVAYNFFSGF 345

Query: 893  SQGCTNLFFRNVGFDYTGNCIPGRDMQRPQPECSMIPGGGLNCFRIPT-RPLGCG 1054
             Q C+ LFFRNVGFD++ NCIPGRDMQRPQP+CS+IPGGGLNC RIP+ RPL CG
Sbjct: 346  GQECSKLFFRNVGFDFSVNCIPGRDMQRPQPDCSVIPGGGLNCLRIPSARPLICG 400


>ref|NP_001240861.1| leucine-rich repeat extensin-like protein 4-like precursor [Glycine
            max] gi|223452546|gb|ACM89600.1| leucine-rich repeat
            family protein / extensin family protein [Glycine max]
          Length = 427

 Score =  484 bits (1246), Expect = e-134
 Identities = 241/362 (66%), Positives = 279/362 (77%), Gaps = 4/362 (1%)
 Frame = +2

Query: 2    WVGGG---QIPSRSLHSSPKDAYTALQAWKSAITDDPLGILKTWVGTNVCTYKGIFCENS 172
            WVGGG     P RS   + + AYTALQAWKSAIT+DPL IL +WVG NVC YKG+FC N 
Sbjct: 55   WVGGGINSPEPPRSSVPNLEGAYTALQAWKSAITEDPLKILSSWVGPNVCAYKGVFCANP 114

Query: 173  QADMSSTSNPVVKAIDLNKFNLQGTLVQEXXXXXXXXXXXXXXXRFIGTIPITFREFNSL 352
            Q +M +++ PVV  IDLN  NL+GTLV+E               RF GT+P TFR+   L
Sbjct: 115  QDEMVASAFPVVAGIDLNHANLKGTLVKELSLLSDLSLLHLNSNRFTGTVPDTFRDLVFL 174

Query: 353  TELDLSNNLFSGPFPRSILTLPNLIYLDLRFNNFSGYIPDALFNMNLDAILLNNNQFEGQ 532
             ELDLSNN  SGPFP + L +P LIYLDLRFN FSG +P  LF+ NLDA+ LNNNQFEG+
Sbjct: 175  EELDLSNNQLSGPFPAATLYMPGLIYLDLRFNYFSGPLPQELFSKNLDALFLNNNQFEGE 234

Query: 533  IPQSLGNSPASVINLANNKFSGDIPTSFGYMGPALKEVLFLNNQLTGCIPEGVGFLTEIE 712
            IPQ+LG+SPASVINLANNK SG IP S G+MG  +KE+LFLNNQLTGCIPEGVG  TE++
Sbjct: 235  IPQNLGSSPASVINLANNKLSGSIPASLGFMGSKIKEILFLNNQLTGCIPEGVGLFTEMQ 294

Query: 713  VMDVSFNSLMGHLPDTISCMSQIEVLNFAHNELSGYLPDLVCSLRSIINLTVSYNFFSGF 892
            V+DVSFNSLMGHLPDT+SC+  IEVLN AHN+LSG L D+VCSLRS+ NLTV+YNFFSGF
Sbjct: 295  VLDVSFNSLMGHLPDTLSCLQDIEVLNLAHNKLSGELSDVVCSLRSLANLTVAYNFFSGF 354

Query: 893  SQGCTNLFFRNVGFDYTGNCIPGRDMQRPQPECSMIPGGGLNCFRIPT-RPLGCGSMAQT 1069
            SQ C+ LFFRNVGFD++ NCIP RDMQRP PECS IPGG L+C RIPT RPL CGSMA +
Sbjct: 355  SQQCSRLFFRNVGFDFSLNCIPDRDMQRPPPECSGIPGGSLSCLRIPTPRPLVCGSMAVS 414

Query: 1070 SS 1075
             S
Sbjct: 415  KS 416


>ref|XP_002514194.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223546650|gb|EEF48148.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 414

 Score =  481 bits (1239), Expect = e-133
 Identities = 241/364 (66%), Positives = 280/364 (76%), Gaps = 8/364 (2%)
 Frame = +2

Query: 2    WVGGG-----QIPSRSLHSSPKDAYTALQAWKSAITDDPLGILKTWVGTNVCTYKGIFCE 166
            W+GGG       PS S  S+  +AYTALQAWKSAITDDP  IL TWVGTNVC+YKGIFC 
Sbjct: 41   WIGGGINIPNPTPSGSSVSNLNNAYTALQAWKSAITDDPSKILDTWVGTNVCSYKGIFCA 100

Query: 167  NSQAD--MSSTSNPVVKAIDLNKFNLQGTLVQEXXXXXXXXXXXXXXXRFIGTIPITFRE 340
              + D   ++++ PVV  IDLN  NLQG LV+E               RF GTIP TF++
Sbjct: 101  VPRGDDRYAASTGPVVSGIDLNHANLQGNLVKELSLLTDMSLFHLNSNRFSGTIPDTFKD 160

Query: 341  FNSLTELDLSNNLFSGPFPRSILTLPNLIYLDLRFNNFSGYIPDALFNMNLDAILLNNNQ 520
              SL ELDLSNN FSG FP   L +PNL+YLDLRFN+FSG +PD LFN  LDAILLNNNQ
Sbjct: 161  LISLQELDLSNNHFSGSFPTVTLYIPNLVYLDLRFNSFSGPVPDDLFNKGLDAILLNNNQ 220

Query: 521  FEGQIPQSLGNSPASVINLANNKFSGDIPTSFGYMGPALKEVLFLNNQLTGCIPEGVGFL 700
            F+GQIP +LGNSPASVINLANNKFSG +P SFG M   LKE+LFLNNQLTGCIPE VG  
Sbjct: 221  FDGQIPDNLGNSPASVINLANNKFSGTLPASFGIMSSKLKEILFLNNQLTGCIPESVGMF 280

Query: 701  TEIEVMDVSFNSLMGHLPDTISCMSQIEVLNFAHNELSGYLPDLVCSLRSIINLTVSYNF 880
            T++EV+DVS N+LMGHLPD+ISC+SQIEVLN AHN+ SG LPDLVCSL+S++NLTV+YNF
Sbjct: 281  TDMEVLDVSQNALMGHLPDSISCLSQIEVLNLAHNKFSGVLPDLVCSLKSLLNLTVAYNF 340

Query: 881  FSGFSQGCTNLFFRNVGFDYTGNCIPGRDMQRPQPECSMIPGGGLNCFRIP-TRPLGCGS 1057
            FSGFSQ C  LF RNVGFD++ NCIPGR+MQRPQP+CS+ PGGGL+C RIP  +PL CGS
Sbjct: 341  FSGFSQECARLFIRNVGFDFSLNCIPGRNMQRPQPDCSVAPGGGLSCLRIPAVQPLVCGS 400

Query: 1058 MAQT 1069
            +  T
Sbjct: 401  LGVT 404


>ref|XP_002308303.1| predicted protein [Populus trichocarpa] gi|222854279|gb|EEE91826.1|
            predicted protein [Populus trichocarpa]
          Length = 409

 Score =  481 bits (1237), Expect = e-133
 Identities = 240/366 (65%), Positives = 284/366 (77%), Gaps = 7/366 (1%)
 Frame = +2

Query: 2    WVGGG------QIPSRSLHSSPKDAYTALQAWKSAITDDPLGILKTWVGTNVCTYKGIFC 163
            W+GGG        P  S+ S+P  AY ALQ+WKSAITDDPL +L TWVGT+VC YKG+FC
Sbjct: 41   WIGGGIRSSPTPSPGSSV-SNPNSAYAALQSWKSAITDDPLKVLDTWVGTDVCAYKGVFC 99

Query: 164  ENSQADMSSTSNPVVKAIDLNKFNLQGTLVQEXXXXXXXXXXXXXXXRFIGTIPITFREF 343
             + Q D   +   VV  IDLN  NLQGTLV+E               RF GT+P TF++ 
Sbjct: 100  ADPQDDGPGS---VVVGIDLNHANLQGTLVKEISVLTDLSLLHLNSNRFSGTLPDTFKDL 156

Query: 344  NSLTELDLSNNLFSGPFPRSILTLPNLIYLDLRFNNFSGYIPDALFNMNLDAILLNNNQF 523
             SL ELDLSNN FSGPFP   L +PNL+YLDLRFN+FSG IP+ +FN  LDAI LNNNQF
Sbjct: 157  ISLQELDLSNNHFSGPFPTVTLYIPNLMYLDLRFNSFSGPIPEDVFNKKLDAIFLNNNQF 216

Query: 524  EGQIPQSLGNSPASVINLANNKFSGDIPTSFGYMGPALKEVLFLNNQLTGCIPEGVGFLT 703
            + QIPQ+LG+SPASVINLANNK SG+IP SFG M   +KE+LFLNNQLTGCIP+GVG  T
Sbjct: 217  DSQIPQNLGSSPASVINLANNKLSGNIPASFGLMSSKVKEILFLNNQLTGCIPQGVGLFT 276

Query: 704  EIEVMDVSFNSLMGHLPDTISCMSQIEVLNFAHNELSGYLPDLVCSLRSIINLTVSYNFF 883
            E++V+DVSFNSLMGHLPDTISC++QIEVLN AHN+LSG +P+LVCSLRS++NLTV+ NFF
Sbjct: 277  EMQVLDVSFNSLMGHLPDTISCLNQIEVLNLAHNKLSGQVPELVCSLRSLVNLTVASNFF 336

Query: 884  SGFSQGCTNLFFRNVGFDYTGNCIPGRDMQRPQPECSMIPGGGLNCFRIPT-RPLGCGSM 1060
            SGFSQ C  LFFRNVGFD++ NCIPGRDMQRPQPECS+IPGGGL+C RIP+ +PL CGS+
Sbjct: 337  SGFSQDCAKLFFRNVGFDFSLNCIPGRDMQRPQPECSVIPGGGLSCLRIPSAQPLICGSL 396

Query: 1061 AQTSSA 1078
             +T  A
Sbjct: 397  PKTLEA 402


>emb|CAN62837.1| hypothetical protein VITISV_004527 [Vitis vinifera]
          Length = 398

 Score =  479 bits (1234), Expect = e-133
 Identities = 230/333 (69%), Positives = 270/333 (81%), Gaps = 1/333 (0%)
 Frame = +2

Query: 59   YTALQAWKSAITDDPLGILKTWVGTNVCTYKGIFCENSQADMSSTSNPVVKAIDLNKFNL 238
            + ALQAWKSAITDDPL +L+TWVG+NVC Y+G+FC + + D S  + PVV  IDLN+ NL
Sbjct: 56   HLALQAWKSAITDDPLKVLRTWVGSNVCAYRGVFCADPEEDGSGQTGPVVAGIDLNRANL 115

Query: 239  QGTLVQEXXXXXXXXXXXXXXXRFIGTIPITFREFNSLTELDLSNNLFSGPFPRSILTLP 418
            QGTLV+E               RF GT+P +FR   SL ELDLSNN FSGPFP   L +P
Sbjct: 116  QGTLVKELSVLTDMSLLHLSGNRFTGTVPESFRYLLSLKELDLSNNHFSGPFPTVTLLMP 175

Query: 419  NLIYLDLRFNNFSGYIPDALFNMNLDAILLNNNQFEGQIPQSLGNSPASVINLANNKFSG 598
            NLIYLD+RFNNF+G IPD LFN  LDAI++NNNQF+G++P +LGNSPASVINLANNKFSG
Sbjct: 176  NLIYLDIRFNNFAGPIPDDLFNKELDAIIINNNQFDGELPPNLGNSPASVINLANNKFSG 235

Query: 599  DIPTSFGYMGPALKEVLFLNNQLTGCIPEGVGFLTEIEVMDVSFNSLMGHLPDTISCMSQ 778
            +IPTSF YM P LKE+LFLNNQLTGCIPEGVG    +EV+D+S NSLMGHLP++ISC+ +
Sbjct: 236  NIPTSFAYMNPKLKEILFLNNQLTGCIPEGVGMWDGMEVLDLSHNSLMGHLPNSISCLEE 295

Query: 779  IEVLNFAHNELSGYLPDLVCSLRSIINLTVSYNFFSGFSQGCTNLFFRNVGFDYTGNCIP 958
            IEVLN AHN+LSG L DLVCSLRSI+NLTV+YNFFSGF Q C+ LFFRNVGFD++ NCIP
Sbjct: 296  IEVLNLAHNKLSGSLSDLVCSLRSIVNLTVAYNFFSGFGQECSKLFFRNVGFDFSVNCIP 355

Query: 959  GRDMQRPQPECSMIPGGGLNCFRIPT-RPLGCG 1054
            GRDMQRPQP+CS+IPGGGLNC RIP+ RPL CG
Sbjct: 356  GRDMQRPQPDCSVIPGGGLNCLRIPSARPLICG 388


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