BLASTX nr result

ID: Cimicifuga21_contig00019121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019121
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73290.1| hypothetical protein VITISV_005894 [Vitis vinifera]   270   4e-70
ref|XP_002279622.1| PREDICTED: dof zinc finger protein DOF5.6 [V...   270   5e-70
emb|CBI15034.3| unnamed protein product [Vitis vinifera]              269   6e-70
ref|XP_002318052.1| f-box family protein [Populus trichocarpa] g...   259   5e-67
ref|XP_002321600.1| f-box family protein [Populus trichocarpa] g...   256   4e-66

>emb|CAN73290.1| hypothetical protein VITISV_005894 [Vitis vinifera]
          Length = 321

 Score =  270 bits (690), Expect = 4e-70
 Identities = 138/245 (56%), Positives = 175/245 (71%), Gaps = 12/245 (4%)
 Frame = +2

Query: 2   CYYNNYSLTQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVSAKKSNEKPLNHCNXXX 181
           CYYNNYSL+QPRYFCKTCRRYWTKGG+LRNIPVGGGCRKNK+V++KKSN+  +N  N   
Sbjct: 81  CYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVASKKSNDHSINQ-NPGP 139

Query: 182 XXHNPTDLHLSFPDVQMSHLTXXXXXXXXXXXMNFMERGYNAMLENSSRQVDHFMESKFD 361
             HNPTDLHLSFP+VQ SHL+            +FME  YN MLEN +R +D FME KF+
Sbjct: 140 SSHNPTDLHLSFPEVQFSHLSNLLGSHGGLGNHSFMESKYNGMLEN-ARPID-FMEGKFE 197

Query: 362 AILGNTRSHDFMGTNDF-LGSLGDVGTGHEFSQNFHGLCS-YGNSMNENNGAF------- 514
           AI+G++R+HDFMG  +  +G LGD+  G   + NFHGLCS +G +++ N G F       
Sbjct: 198 AIVGSSRNHDFMGNCELGMGGLGDMSHG-GLAPNFHGLCSPFGVTLDXNGGNFMDTCQRL 256

Query: 515 -IPFGGNEDPNAVERKPN-KFFSLDWQDHGCFEVGKESLGFLDCIGSWNAVM-NGYGSSA 685
            +P+ GN + NA++ KPN K  SLDWQD GC + GK+S  +L+ +GSWN +M NGYG S 
Sbjct: 257 MLPYEGNVEQNAMDVKPNTKLLSLDWQDQGCSDAGKDSFVYLNSLGSWNGMMSNGYGPST 316

Query: 686 TNPLM 700
           TNPL+
Sbjct: 317 TNPLV 321


>ref|XP_002279622.1| PREDICTED: dof zinc finger protein DOF5.6 [Vitis vinifera]
          Length = 308

 Score =  270 bits (689), Expect = 5e-70
 Identities = 138/245 (56%), Positives = 175/245 (71%), Gaps = 12/245 (4%)
 Frame = +2

Query: 2   CYYNNYSLTQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVSAKKSNEKPLNHCNXXX 181
           CYYNNYSL+QPRYFCKTCRRYWTKGG+LRNIPVGGGCRKNK+V++KKSN+  +N  N   
Sbjct: 68  CYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVASKKSNDHSINQ-NPGP 126

Query: 182 XXHNPTDLHLSFPDVQMSHLTXXXXXXXXXXXMNFMERGYNAMLENSSRQVDHFMESKFD 361
             HNPTDLHLSFP+VQ SHL+            +FME  YN MLEN +R +D FME KF+
Sbjct: 127 SSHNPTDLHLSFPEVQFSHLSNLLGSHGGLGNHSFMESKYNGMLEN-ARPID-FMEGKFE 184

Query: 362 AILGNTRSHDFMGTNDF-LGSLGDVGTGHEFSQNFHGLCS-YGNSMNENNGAF------- 514
           AI+G++R+HDFMG  +  +G LGD+  G   + NFHGLCS +G +++ N G F       
Sbjct: 185 AIVGSSRNHDFMGNCELGMGGLGDMSHG-GLAPNFHGLCSPFGVTLDGNGGNFMDTCQRL 243

Query: 515 -IPFGGNEDPNAVERKPN-KFFSLDWQDHGCFEVGKESLGFLDCIGSWNAVM-NGYGSSA 685
            +P+ GN + NA++ KPN K  SLDWQD GC + GK+S  +L+ +GSWN +M NGYG S 
Sbjct: 244 MLPYEGNVEQNAMDVKPNTKLLSLDWQDQGCSDAGKDSFVYLNSLGSWNGMMSNGYGPST 303

Query: 686 TNPLM 700
           TNPL+
Sbjct: 304 TNPLV 308


>emb|CBI15034.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  269 bits (688), Expect = 6e-70
 Identities = 138/244 (56%), Positives = 174/244 (71%), Gaps = 12/244 (4%)
 Frame = +2

Query: 2   CYYNNYSLTQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVSAKKSNEKPLNHCNXXX 181
           CYYNNYSL+QPRYFCKTCRRYWTKGG+LRNIPVGGGCRKNK+V++KKSN+  +N  N   
Sbjct: 68  CYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVASKKSNDHSINQ-NPGP 126

Query: 182 XXHNPTDLHLSFPDVQMSHLTXXXXXXXXXXXMNFMERGYNAMLENSSRQVDHFMESKFD 361
             HNPTDLHLSFP+VQ SHL+            +FME  YN MLEN +R +D FME KF+
Sbjct: 127 SSHNPTDLHLSFPEVQFSHLSNLLGSHGGLGNHSFMESKYNGMLEN-ARPID-FMEGKFE 184

Query: 362 AILGNTRSHDFMGTNDF-LGSLGDVGTGHEFSQNFHGLCS-YGNSMNENNGAF------- 514
           AI+G++R+HDFMG  +  +G LGD+  G   + NFHGLCS +G +++ N G F       
Sbjct: 185 AIVGSSRNHDFMGNCELGMGGLGDMSHG-GLAPNFHGLCSPFGVTLDGNGGNFMDTCQRL 243

Query: 515 -IPFGGNEDPNAVERKPN-KFFSLDWQDHGCFEVGKESLGFLDCIGSWNAVM-NGYGSSA 685
            +P+ GN + NA++ KPN K  SLDWQD GC + GK+S  +L+ +GSWN +M NGYG S 
Sbjct: 244 MLPYEGNVEQNAMDVKPNTKLLSLDWQDQGCSDAGKDSFVYLNSLGSWNGMMSNGYGPST 303

Query: 686 TNPL 697
           TNPL
Sbjct: 304 TNPL 307


>ref|XP_002318052.1| f-box family protein [Populus trichocarpa]
           gi|222858725|gb|EEE96272.1| f-box family protein
           [Populus trichocarpa]
          Length = 312

 Score =  259 bits (663), Expect = 5e-67
 Identities = 131/247 (53%), Positives = 170/247 (68%), Gaps = 14/247 (5%)
 Frame = +2

Query: 2   CYYNNYSLTQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVSAKKSNEKPLNHCN-XX 178
           CYYNNYSL+QPRYFCKTCRRYWTKGG+LRNIPVGGGCRKNK+VS KKSN++ +N  N   
Sbjct: 68  CYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS-KKSNDQSVNQINPGS 126

Query: 179 XXXHNPTDLHLSFPDVQMSHLTXXXXXXXXXXXMNFMERGYNAMLENSSRQVDHFMESKF 358
              HNPTDLHLSFP+VQ+SHL             NFM+  YN  +  + R +D FM+SK 
Sbjct: 127 SSSHNPTDLHLSFPEVQLSHLNSILGSQGTIATSNFMDSKYNIGMLENPRPID-FMDSKL 185

Query: 359 DAILGNTRSHDFMGTND--FLGSLGDVGTGHEFSQNFHGLC-SYGNSMNENNGAF----- 514
           +A++G++R++DFMG  D   +  LGD    H  + NF  +C S+G S++ N+G F     
Sbjct: 186 EALVGSSRNYDFMGNGDLGMVSGLGDTSHHHGLAPNFSDICSSFGMSLDGNSGTFMETCQ 245

Query: 515 ---IPFG-GNEDPNAVERKPN-KFFSLDWQDHGCFEVGKESLGFLDCIGSWNAVMNGYGS 679
              +P+G GN D NA++ KPN K  SLDWQD GC + GK++ G+L+ +GSW  +MNGYGS
Sbjct: 246 RLMLPYGQGNNDQNAIDVKPNTKLLSLDWQDQGCSDGGKDTFGYLNNLGSWTGMMNGYGS 305

Query: 680 SATNPLM 700
           S TN L+
Sbjct: 306 STTNTLV 312


>ref|XP_002321600.1| f-box family protein [Populus trichocarpa]
           gi|222868596|gb|EEF05727.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  256 bits (655), Expect = 4e-66
 Identities = 133/249 (53%), Positives = 172/249 (69%), Gaps = 16/249 (6%)
 Frame = +2

Query: 2   CYYNNYSLTQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVSAKKSNEKPLNHCN-XX 178
           CYYNNYSL+QPRYFCKTCRRYWTKGG+LRNIPVGGGCRKNK+VS KKSN++ +N  N   
Sbjct: 68  CYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS-KKSNDQSVNQINTGS 126

Query: 179 XXXHNPTDLHLSFPD-VQMSHLTXXXXXXXXXXXMNFMERGYNAMLENSSRQVDHFMESK 355
              HNPTDLHLSFPD VQ+SHL             NFME  YN  +  + R VD FM+SK
Sbjct: 127 SSSHNPTDLHLSFPDQVQLSHLHNILGSQETLANPNFMESKYNIGMLENPRPVD-FMDSK 185

Query: 356 FDAILGNTRSHDFMGTND--FLGSLGDVGTGHEFSQNFHGLCS-YGNSMNENNGAF---- 514
           F+A++G++R++DFMG  D   +  LGD+   H  + N+ G CS +G S++ N+G+F    
Sbjct: 186 FEALVGSSRNYDFMGNGDLGMVSGLGDMSHHHGLAPNYSGYCSPFGMSLDGNSGSFMETC 245

Query: 515 ----IPF--GGNEDPNAVERKPN-KFFSLDWQDHGCFEVGKESLGFLDCIGSWNAVMNGY 673
               +P+  G + D N ++ KPN K  SLDWQD GC +VGK++ G+L+ +GSW  +MNGY
Sbjct: 246 QRLMLPYDQGNDHDQNPIDVKPNTKLLSLDWQDQGCSDVGKDTFGYLNNLGSWTGMMNGY 305

Query: 674 GSSATNPLM 700
           GSS TN L+
Sbjct: 306 GSSTTNTLV 314


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