BLASTX nr result

ID: Cimicifuga21_contig00019095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019095
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase ac...    92   1e-16
ref|XP_002303243.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|XP_002298092.1| predicted protein [Populus trichocarpa] gi|2...    91   3e-16
ref|XP_002521326.1| ubiquitin-protein ligase, putative [Ricinus ...    90   7e-16
ref|XP_004141700.1| PREDICTED: mitochondrial ubiquitin ligase ac...    89   1e-15

>ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1
           [Vitis vinifera] gi|297743001|emb|CBI35868.3| unnamed
           protein product [Vitis vinifera]
          Length = 391

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 36/68 (52%), Positives = 51/68 (75%)
 Frame = +3

Query: 39  DDEAVEGANGGIPEGQLCVVCLSRRRTFVFVPCGHMVCCRRCARSVQRGFIPKCPLCRRA 218
           D +  E   G +P+G+LCV+CL RR+   FVPCGH+VCC+RCA SV+R   PKCP+CR+ 
Sbjct: 322 DTQIAEDDAGDVPDGELCVICLMRRKRSAFVPCGHLVCCQRCALSVERELSPKCPVCRQI 381

Query: 219 IETSVKLF 242
           I +SV+++
Sbjct: 382 IRSSVRIY 389


>ref|XP_002303243.1| predicted protein [Populus trichocarpa] gi|222840675|gb|EEE78222.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 38/77 (49%), Positives = 53/77 (68%)
 Frame = +3

Query: 12  SRDNVANVHDDEAVEGANGGIPEGQLCVVCLSRRRTFVFVPCGHMVCCRRCARSVQRGFI 191
           S ++V+ + D+E      G +PEGQLCV+CL RRR   F+PCGH+ CC  CA SV+    
Sbjct: 317 SDEDVSQIDDNEDA----GDVPEGQLCVICLMRRRRAAFIPCGHLACCHTCAVSVESEVS 372

Query: 192 PKCPLCRRAIETSVKLF 242
           PKCPLCR+A+  S+++F
Sbjct: 373 PKCPLCRQAVRNSIRIF 389


>ref|XP_002298092.1| predicted protein [Populus trichocarpa] gi|222845350|gb|EEE82897.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 38/74 (51%), Positives = 53/74 (71%)
 Frame = +3

Query: 21  NVANVHDDEAVEGANGGIPEGQLCVVCLSRRRTFVFVPCGHMVCCRRCARSVQRGFIPKC 200
           +V+ + +DEA     G +P+GQLCV+CL+RRR   F+PCGH+ CC  CA SV+    PKC
Sbjct: 320 DVSRIDEDEA-----GDVPDGQLCVICLTRRRRSAFIPCGHLACCHFCAISVESEVSPKC 374

Query: 201 PLCRRAIETSVKLF 242
           PLCR+AI  S+++F
Sbjct: 375 PLCRQAIRNSIRVF 388


>ref|XP_002521326.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223539404|gb|EEF40994.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 387

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 36/64 (56%), Positives = 48/64 (75%)
 Frame = +3

Query: 51  VEGANGGIPEGQLCVVCLSRRRTFVFVPCGHMVCCRRCARSVQRGFIPKCPLCRRAIETS 230
           VE     +P+GQLCV+CL RRR   F+PCGH+VCC+ CA SV+R   PKCPLCR+A+  S
Sbjct: 322 VEEETVDVPDGQLCVICLMRRRRAAFIPCGHLVCCQICAISVEREVSPKCPLCRQAVRNS 381

Query: 231 VKLF 242
           +++F
Sbjct: 382 IRIF 385


>ref|XP_004141700.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           [Cucumis sativus] gi|449480528|ref|XP_004155921.1|
           PREDICTED: mitochondrial ubiquitin ligase activator of
           nfkb 1-like [Cucumis sativus]
          Length = 389

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 37/72 (51%), Positives = 53/72 (73%)
 Frame = +3

Query: 27  ANVHDDEAVEGANGGIPEGQLCVVCLSRRRTFVFVPCGHMVCCRRCARSVQRGFIPKCPL 206
           ++V DDE     +  +P+GQLCV+CL RR+   F+PCGH+VCC RCA SV+R   PKCP+
Sbjct: 320 SHVPDDEL----SSHVPDGQLCVICLMRRKRSAFIPCGHLVCCERCAVSVERESSPKCPI 375

Query: 207 CRRAIETSVKLF 242
           CR+ I +SV+++
Sbjct: 376 CRQQIRSSVRIY 387


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