BLASTX nr result

ID: Cimicifuga21_contig00019087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019087
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277030.1| PREDICTED: uncharacterized protein LOC100266...   293   6e-77
ref|XP_002529718.1| conserved hypothetical protein [Ricinus comm...   291   2e-76
ref|XP_002316350.1| predicted protein [Populus trichocarpa] gi|2...   290   4e-76
emb|CAN69001.1| hypothetical protein VITISV_022485 [Vitis vinifera]   290   4e-76
gb|ABK96158.1| unknown [Populus trichocarpa]                          287   4e-75

>ref|XP_002277030.1| PREDICTED: uncharacterized protein LOC100266780 [Vitis vinifera]
           gi|296086053|emb|CBI31494.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score =  293 bits (750), Expect = 6e-77
 Identities = 153/260 (58%), Positives = 178/260 (68%), Gaps = 1/260 (0%)
 Frame = +1

Query: 184 MARPALLHLLRSQRKQLSARNFQTGDSLWSRHSTLAPTYTGAGFHTSSVGTWEQPSFLKY 363
           M R ALLHLLRSQ +++S+ N  +G                  +H    G W      K 
Sbjct: 1   MGRVALLHLLRSQSRRISSTNALSG------------------YHPHRFGIWPHAPSAKP 42

Query: 364 NRTSAMCLGA-QKRWASRGSSAEDDDDRISIGPRKGGKPGEDEKDSGIVYHGPISSTIXX 540
           N  SA+ L A Q+RWAS+  +AEDD  +ISIGPR+GG+  EDEKDSGIVYHGPISST+  
Sbjct: 43  NINSAIQLAASQRRWASKARTAEDDS-KISIGPRRGGEMEEDEKDSGIVYHGPISSTVKK 101

Query: 541 XXXXXXXXXXXXXXXGPVITFMTSPDMNVILKGGVASTVIFISASTTAALHWFVSPYIHK 720
                          GPVITFMTSP+MNVILKG VAS+VIF+SASTTAALHWFVSPY+HK
Sbjct: 102 VKLLSLSTCCLSVSLGPVITFMTSPEMNVILKGAVASSVIFLSASTTAALHWFVSPYVHK 161

Query: 721 LRWHPGSDSFEVEMMSWLATFIPKTIKFSDIRVAETNRPYVTFKANGEFYFVDADHCHNX 900
           LRW PGSD+FEVEMMSWLAT++PKT+KF+DIR  ETNRP+VTFKANG FYFVDA+HCHN 
Sbjct: 162 LRWQPGSDTFEVEMMSWLATYLPKTLKFADIRPPETNRPFVTFKANGNFYFVDAEHCHNK 221

Query: 901 XXXXXXXXXXXXHESAFKNL 960
                       HESAFKNL
Sbjct: 222 ALLAKLTPRKAAHESAFKNL 241


>ref|XP_002529718.1| conserved hypothetical protein [Ricinus communis]
           gi|223530820|gb|EEF32684.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score =  291 bits (746), Expect = 2e-76
 Identities = 153/260 (58%), Positives = 179/260 (68%), Gaps = 1/260 (0%)
 Frame = +1

Query: 184 MARPALLHLLRSQRKQLSARNFQTGDSLWSRHSTLAPTYTGAGFHTSSVGTWEQPSFLKY 363
           MAR ALLHLLRSQ + LS+                 P+   +G+     GTW      K 
Sbjct: 1   MARTALLHLLRSQTRNLSS-----------------PSTVQSGYRVCRFGTWSHAHTAKT 43

Query: 364 NRTSAMCLGA-QKRWASRGSSAEDDDDRISIGPRKGGKPGEDEKDSGIVYHGPISSTIXX 540
           N  SA+ + A QKRWAS+  + EDD+ RISIGPR+G + GEDEK++G+VY+GPISSTI  
Sbjct: 44  NYNSAIQIAASQKRWASQARTTEDDN-RISIGPRRGKEAGEDEKETGVVYYGPISSTIKK 102

Query: 541 XXXXXXXXXXXXXXXGPVITFMTSPDMNVILKGGVASTVIFISASTTAALHWFVSPYIHK 720
                          GPVITFMTSPDMNVILKG VAS+VIF+SASTTAALHWFV+PYIHK
Sbjct: 103 VKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGAVASSVIFLSASTTAALHWFVTPYIHK 162

Query: 721 LRWHPGSDSFEVEMMSWLATFIPKTIKFSDIRVAETNRPYVTFKANGEFYFVDADHCHNX 900
           LRW PGSDSFEVEMMSW+AT+IPKTIKF+DIR AETNRP+VTFKA+G FYFVD +HCHN 
Sbjct: 163 LRWQPGSDSFEVEMMSWMATYIPKTIKFADIRPAETNRPFVTFKADGNFYFVDTEHCHNK 222

Query: 901 XXXXXXXXXXXXHESAFKNL 960
                       +ESAFKNL
Sbjct: 223 ALLARLTPQKSQNESAFKNL 242


>ref|XP_002316350.1| predicted protein [Populus trichocarpa] gi|222865390|gb|EEF02521.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  290 bits (743), Expect = 4e-76
 Identities = 154/261 (59%), Positives = 176/261 (67%), Gaps = 2/261 (0%)
 Frame = +1

Query: 184 MAR-PALLHLLRSQRKQLSA-RNFQTGDSLWSRHSTLAPTYTGAGFHTSSVGTWEQPSFL 357
           MAR  ALLHLLRSQ KQLS  RNF +G                  +H    GTW      
Sbjct: 1   MARGAALLHLLRSQSKQLSTIRNFHSG------------------YHPCRFGTWPHDQCA 42

Query: 358 KYNRTSAMCLGAQKRWASRGSSAEDDDDRISIGPRKGGKPGEDEKDSGIVYHGPISSTIX 537
           K N   A     QKRWASR ++ +DD+ +ISIGPR+G + GEDEK++G+VY+GPI+STI 
Sbjct: 43  KLNFNHASLTATQKRWASRATTTKDDN-KISIGPRRGKEAGEDEKETGVVYYGPITSTIK 101

Query: 538 XXXXXXXXXXXXXXXXGPVITFMTSPDMNVILKGGVASTVIFISASTTAALHWFVSPYIH 717
                           GPV+TFMTS D NVILKG VAS+VIF SASTTAALHWFVSPYIH
Sbjct: 102 KVKMLSLSTCCLSVSLGPVVTFMTSQDTNVILKGAVASSVIFFSASTTAALHWFVSPYIH 161

Query: 718 KLRWHPGSDSFEVEMMSWLATFIPKTIKFSDIRVAETNRPYVTFKANGEFYFVDADHCHN 897
           KLRW PGSDSFEVEMMSWLAT+IPKTIKF+DIR+ ETNRP+VTFKANG FYFVD++HCHN
Sbjct: 162 KLRWQPGSDSFEVEMMSWLATYIPKTIKFADIRLPETNRPFVTFKANGNFYFVDSEHCHN 221

Query: 898 XXXXXXXXXXXXXHESAFKNL 960
                        HESAFKNL
Sbjct: 222 KALLNRLTPQKSAHESAFKNL 242


>emb|CAN69001.1| hypothetical protein VITISV_022485 [Vitis vinifera]
          Length = 241

 Score =  290 bits (743), Expect = 4e-76
 Identities = 152/260 (58%), Positives = 177/260 (68%), Gaps = 1/260 (0%)
 Frame = +1

Query: 184 MARPALLHLLRSQRKQLSARNFQTGDSLWSRHSTLAPTYTGAGFHTSSVGTWEQPSFLKY 363
           M R ALLHLLRSQ +++S+ N  +G                  +H    G W      K 
Sbjct: 1   MGRVALLHLLRSQSRRISSTNALSG------------------YHPHRFGIWPHAPSAKP 42

Query: 364 NRTSAMCLGA-QKRWASRGSSAEDDDDRISIGPRKGGKPGEDEKDSGIVYHGPISSTIXX 540
           N  SA+ L A Q+RWAS+  +AED   +ISIGPR+GG+  EDEKDSGIVYHGPISST+  
Sbjct: 43  NINSAIQLAASQRRWASKARTAEDXS-KISIGPRRGGEMEEDEKDSGIVYHGPISSTVKK 101

Query: 541 XXXXXXXXXXXXXXXGPVITFMTSPDMNVILKGGVASTVIFISASTTAALHWFVSPYIHK 720
                          GPVITFMTSP+MNVILKG VAS+VIF+SASTTAALHWFVSPY+HK
Sbjct: 102 VKLLSLSTCCLSVSLGPVITFMTSPEMNVILKGAVASSVIFLSASTTAALHWFVSPYVHK 161

Query: 721 LRWHPGSDSFEVEMMSWLATFIPKTIKFSDIRVAETNRPYVTFKANGEFYFVDADHCHNX 900
           LRW PGSD+FEVEMMSWLAT++PKT+KF+DIR  ETNRP+VTFKANG FYFVDA+HCHN 
Sbjct: 162 LRWQPGSDTFEVEMMSWLATYLPKTLKFADIRPPETNRPFVTFKANGNFYFVDAEHCHNK 221

Query: 901 XXXXXXXXXXXXHESAFKNL 960
                       HESAFKNL
Sbjct: 222 ALLAKLTPRKAAHESAFKNL 241


>gb|ABK96158.1| unknown [Populus trichocarpa]
          Length = 242

 Score =  287 bits (734), Expect = 4e-75
 Identities = 153/261 (58%), Positives = 175/261 (67%), Gaps = 2/261 (0%)
 Frame = +1

Query: 184 MAR-PALLHLLRSQRKQLSA-RNFQTGDSLWSRHSTLAPTYTGAGFHTSSVGTWEQPSFL 357
           MAR  ALLHLLRSQ KQLS  RNF +G                  +H    GTW      
Sbjct: 1   MARGAALLHLLRSQSKQLSTIRNFHSG------------------YHPCRFGTWPHDQCA 42

Query: 358 KYNRTSAMCLGAQKRWASRGSSAEDDDDRISIGPRKGGKPGEDEKDSGIVYHGPISSTIX 537
           K N   A     QKRWASR ++ +DD+ +ISIGPR+G + GEDEK++G+VY+ PI+STI 
Sbjct: 43  KLNFNHASLTATQKRWASRATTTKDDN-KISIGPRRGKEAGEDEKETGVVYYCPITSTIK 101

Query: 538 XXXXXXXXXXXXXXXXGPVITFMTSPDMNVILKGGVASTVIFISASTTAALHWFVSPYIH 717
                           GPV+TFMTS D NVILKG VAS+VIF SASTTAALHWFVSPYIH
Sbjct: 102 KVKMLSLSTCCLSVSLGPVVTFMTSQDTNVILKGAVASSVIFFSASTTAALHWFVSPYIH 161

Query: 718 KLRWHPGSDSFEVEMMSWLATFIPKTIKFSDIRVAETNRPYVTFKANGEFYFVDADHCHN 897
           KLRW PGSDSFEVEMMSWLAT+IPKTIKF+DIR+ ETNRP+VTFKANG FYFVD++HCHN
Sbjct: 162 KLRWQPGSDSFEVEMMSWLATYIPKTIKFADIRLPETNRPFVTFKANGNFYFVDSEHCHN 221

Query: 898 XXXXXXXXXXXXXHESAFKNL 960
                        HESAFKNL
Sbjct: 222 KALLNRLTPQKSAHESAFKNL 242


Top