BLASTX nr result

ID: Cimicifuga21_contig00019082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00019082
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37411.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002267479.1| PREDICTED: protein BREVIS RADIX [Vitis vinif...   148   5e-34
ref|XP_004146121.1| PREDICTED: protein BREVIS RADIX-like [Cucumi...   144   7e-33
ref|XP_003547830.1| PREDICTED: protein BREVIS RADIX-like [Glycin...   141   6e-32
ref|XP_002326585.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31

>emb|CBI37411.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/106 (69%), Positives = 80/106 (75%)
 Frame = -3

Query: 323 MLTCIACSKQLVDXXXXXXXXXXXXXXXXXXGTPSTKEAVKSLTSQIKDMALKFSGTYRQ 144
           MLTCI+CSKQ  +                   TPSTKEAVKSLT+QIKDMALKFSG YRQ
Sbjct: 1   MLTCISCSKQTEEDGRGEEGSGGGARG-----TPSTKEAVKSLTAQIKDMALKFSGAYRQ 55

Query: 143 CKPCTGSSNYKKGQRPYTDFDTVSEGVHYPYLQGGSSSSTPAWDFT 6
           CKPCTGSS+YKKG RPY DFDT+SEGV YPYL+ GSSSSTPAWDFT
Sbjct: 56  CKPCTGSSSYKKGHRPYPDFDTISEGVPYPYLRPGSSSSTPAWDFT 101


>ref|XP_002267479.1| PREDICTED: protein BREVIS RADIX [Vitis vinifera]
          Length = 360

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/106 (69%), Positives = 80/106 (75%)
 Frame = -3

Query: 323 MLTCIACSKQLVDXXXXXXXXXXXXXXXXXXGTPSTKEAVKSLTSQIKDMALKFSGTYRQ 144
           MLTCI+CSKQ  +                   TPSTKEAVKSLT+QIKDMALKFSG YRQ
Sbjct: 1   MLTCISCSKQTEEDGRGEEGSGGGARG-----TPSTKEAVKSLTAQIKDMALKFSGAYRQ 55

Query: 143 CKPCTGSSNYKKGQRPYTDFDTVSEGVHYPYLQGGSSSSTPAWDFT 6
           CKPCTGSS+YKKG RPY DFDT+SEGV YPYL+ GSSSSTPAWDFT
Sbjct: 56  CKPCTGSSSYKKGHRPYPDFDTISEGVPYPYLRPGSSSSTPAWDFT 101


>ref|XP_004146121.1| PREDICTED: protein BREVIS RADIX-like [Cucumis sativus]
           gi|449520457|ref|XP_004167250.1| PREDICTED: protein
           BREVIS RADIX-like [Cucumis sativus]
          Length = 361

 Score =  144 bits (363), Expect = 7e-33
 Identities = 72/105 (68%), Positives = 77/105 (73%)
 Frame = -3

Query: 323 MLTCIACSKQLVDXXXXXXXXXXXXXXXXXXGTPSTKEAVKSLTSQIKDMALKFSGTYRQ 144
           M TCIAC+KQ  D                   TPSTKEAVKSLT+QIKDMALKFSG YRQ
Sbjct: 1   MFTCIACTKQTDDGGEDGAARGSG--------TPSTKEAVKSLTTQIKDMALKFSGAYRQ 52

Query: 143 CKPCTGSSNYKKGQRPYTDFDTVSEGVHYPYLQGGSSSSTPAWDF 9
           CKPCTGSS+YKKGQRPY DFDT SEGV YPY+ G S+SSTPAWDF
Sbjct: 53  CKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDF 97


>ref|XP_003547830.1| PREDICTED: protein BREVIS RADIX-like [Glycine max]
          Length = 349

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/106 (66%), Positives = 77/106 (72%)
 Frame = -3

Query: 323 MLTCIACSKQLVDXXXXXXXXXXXXXXXXXXGTPSTKEAVKSLTSQIKDMALKFSGTYRQ 144
           M TCIAC+K                      GTPSTKEAVKSLT+QIKDMALKFSG Y+Q
Sbjct: 1   MFTCIACTKT---------DDKDEEGGSRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQ 51

Query: 143 CKPCTGSSNYKKGQRPYTDFDTVSEGVHYPYLQGGSSSSTPAWDFT 6
           CKPCTGSS+YKKG RPY DFDT+SEGV YPY+ G SSSSTPAWDFT
Sbjct: 52  CKPCTGSSSYKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFT 97


>ref|XP_002326585.1| predicted protein [Populus trichocarpa] gi|222833907|gb|EEE72384.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/106 (66%), Positives = 74/106 (69%)
 Frame = -3

Query: 323 MLTCIACSKQLVDXXXXXXXXXXXXXXXXXXGTPSTKEAVKSLTSQIKDMALKFSGTYRQ 144
           M TCIAC+K   +                   TPSTKEAVKSLTSQIKDMALK SG Y+Q
Sbjct: 1   MFTCIACTKPAAEDGRGEEGGARGSG------TPSTKEAVKSLTSQIKDMALKMSGAYKQ 54

Query: 143 CKPCTGSSNYKKGQRPYTDFDTVSEGVHYPYLQGGSSSSTPAWDFT 6
           CKPCTG S+YKKGQRPY DFD  SEGV YPY  GGSSSSTPAWDFT
Sbjct: 55  CKPCTGPSSYKKGQRPYPDFDAASEGVPYPYFGGGSSSSTPAWDFT 100


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